RNA–Protein interactions for RNA: ENST00000503627.2

GYPA-203, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 318 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-203ENST00000503627 CAPN12Q6ZSI9 719 aa7.94□□□□□ -1.14
GYPA-203ENST00000503627 SAMD7Q7Z3H4 446 aa7.94□□□□□ -1.14
GYPA-203ENST00000503627 METTL16Q86W50 562 aaKnown RBP7.94□□□□□ -1.14
GYPA-203ENST00000503627 TPCN2Q8NHX9 752 aa7.94□□□□□ -1.14
GYPA-203ENST00000503627 KCTD12Q96CX2 325 aaKnown RBP7.94□□□□□ -1.14
GYPA-203ENST00000503627 USB1Q9BQ65 265 aaKnown RBP7.94□□□□□ -1.14
GYPA-203ENST00000503627 MKNK1Q9BUB5 465 aa7.94□□□□□ -1.14
GYPA-203ENST00000503627 HIRIP3Q9BW71 556 aaPredicted RBP7.94□□□□□ -1.14
GYPA-203ENST00000503627 RABGEF1Q9UJ41 708 aa7.94□□□□□ -1.14
GYPA-203ENST00000503627 LGR5O75473 907 aa7.93□□□□□ -1.14
GYPA-203ENST00000503627 FAM98CQ17RN3 349 aaKnown RBP7.93□□□□□ -1.14
GYPA-203ENST00000503627 GPKOWQ92917 476 aaPredicted RBP eCLIP7.93□□□□□ -1.14
GYPA-203ENST00000503627 DOLKQ9UPQ8 538 aa7.93□□□□□ -1.14
GYPA-203ENST00000503627 ACTN4O43707 911 aaKnown RBP7.92□□□□□ -1.14
GYPA-203ENST00000503627 JUNDP17535 347 aa7.92□□□□□ -1.14
GYPA-203ENST00000503627 WEE1P30291 646 aa7.92□□□□□ -1.14
GYPA-203ENST00000503627 FMR1Q06787 632 aaKnown RBP eCLIP7.92□□□□□ -1.14
GYPA-203ENST00000503627 FKBP5Q13451 457 aaPredicted RBP7.92□□□□□ -1.14
GYPA-203ENST00000503627 TMC7Q7Z402 723 aa7.92□□□□□ -1.14
GYPA-203ENST00000503627 ADAM32Q8TC27 787 aa7.92□□□□□ -1.14
GYPA-203ENST00000503627 PURBQ96QR8 312 aaKnown RBP7.92□□□□□ -1.14
GYPA-203ENST00000503627 RBCK1Q9BYM8 510 aa7.92□□□□□ -1.14
GYPA-203ENST00000503627 TANGO6Q9C0B7 1094 aa7.92□□□□□ -1.14
GYPA-203ENST00000503627 CTHP32929 405 aa7.91□□□□□ -1.14
GYPA-203ENST00000503627 OXLD1Q5BKU9 147 aa7.91□□□□□ -1.14
GYPA-203ENST00000503627 NT5DC4Q86YG4 428 aa7.91□□□□□ -1.14
GYPA-203ENST00000503627 STAC3Q96MF2 364 aa7.91□□□□□ -1.14
GYPA-203ENST00000503627 DNAJC2Q99543 621 aaKnown RBP7.91□□□□□ -1.14
GYPA-203ENST00000503627 LNPKQ9C0E8 428 aa7.91□□□□□ -1.14
GYPA-203ENST00000503627 CWC22Q9HCG8 908 aaKnown RBP7.91□□□□□ -1.14
GYPA-203ENST00000503627 RBM19Q9Y4C8 960 aaKnown RBP7.91□□□□□ -1.14
GYPA-203ENST00000503627 TREHO43280 583 aa7.9□□□□□ -1.14
GYPA-203ENST00000503627 RNF40O75150 1001 aa7.9□□□□□ -1.14
GYPA-203ENST00000503627 NPR3P17342 541 aa7.9□□□□□ -1.14
GYPA-203ENST00000503627 BRICD5Q6PL45 260 aa7.9□□□□□ -1.14
GYPA-203ENST00000503627 ZNF662Q6ZS27 426 aa7.9□□□□□ -1.14
GYPA-203ENST00000503627 NOP9Q86U38 636 aaKnown RBP7.9□□□□□ -1.14
GYPA-203ENST00000503627 ARMC2Q8NEN0 867 aa7.9□□□□□ -1.14
GYPA-203ENST00000503627 BRPF3Q9ULD4 1205 aa7.9□□□□□ -1.14
GYPA-203ENST00000503627 SALL2Q9Y467 1007 aaPredicted RBP7.9□□□□□ -1.14
GYPA-203ENST00000503627 PCDHGA11Q9Y5H2 935 aa7.9□□□□□ -1.14
GYPA-203ENST00000503627 PTCD1O75127 700 aaKnown RBP7.89□□□□□ -1.15
GYPA-203ENST00000503627 SLC43A3Q8NBI5 491 aa7.89□□□□□ -1.15
GYPA-203ENST00000503627 HELQQ8TDG4 1101 aa7.89□□□□□ -1.15
GYPA-203ENST00000503627 CUEDC1Q9NWM3 386 aaPredicted RBP7.89□□□□□ -1.15
GYPA-203ENST00000503627 FANCCQ00597 558 aa7.88□□□□□ -1.15
GYPA-203ENST00000503627 NBPF14Q5TI25 921 aa7.88□□□□□ -1.15
GYPA-203ENST00000503627 TMEM87AQ8NBN3 555 aa7.88□□□□□ -1.15
GYPA-203ENST00000503627 KCNH8Q96L42 1107 aa7.88□□□□□ -1.15
GYPA-203ENST00000503627 FAM161BQ96MY7 647 aa7.88□□□□□ -1.15
GYPA-203ENST00000503627 HINFPQ9BQA5 517 aa7.88□□□□□ -1.15
GYPA-203ENST00000503627 ARHGAP9Q9BRR9 750 aa7.88□□□□□ -1.15
GYPA-203ENST00000503627 TGIF2Q9GZN2 237 aa7.88□□□□□ -1.15
GYPA-203ENST00000503627 RGS20O76081 388 aa7.87□□□□□ -1.15
GYPA-203ENST00000503627 CCNYL3P0C7X3 344 aa7.87□□□□□ -1.15
GYPA-203ENST00000503627 PSME1Q06323 249 aa7.87□□□□□ -1.15
GYPA-203ENST00000503627 DHX38Q92620 1227 aaKnown RBP7.87□□□□□ -1.15
GYPA-203ENST00000503627 COL26A1Q96A83 441 aa7.87□□□□□ -1.15
GYPA-203ENST00000503627 THAP11Q96EK4 314 aa7.87□□□□□ -1.15
GYPA-203ENST00000503627 SLC4A5Q9BY07 1137 aa7.87□□□□□ -1.15
GYPA-203ENST00000503627 PRKAG2Q9UGJ0 569 aa7.87□□□□□ -1.15
GYPA-203ENST00000503627 FAM13AO94988 1023 aa7.86□□□□□ -1.15
GYPA-203ENST00000503627 DSC3Q14574 896 aa7.86□□□□□ -1.15
GYPA-203ENST00000503627 TSEN2Q8NCE0 465 aaKnown RBP7.86□□□□□ -1.15
GYPA-203ENST00000503627 METTL5Q9NRN9 209 aaKnown RBP7.86□□□□□ -1.15
GYPA-203ENST00000503627 RNF19AQ9NV58 838 aa7.86□□□□□ -1.15
GYPA-203ENST00000503627 EVA1BQ9NVM1 165 aa7.86□□□□□ -1.15
GYPA-203ENST00000503627 PARP2Q9UGN5 583 aa7.86□□□□□ -1.15
GYPA-203ENST00000503627 M0R2N6 131 aa7.85□□□□□ -1.15
GYPA-203ENST00000503627 PRPF40AO75400 957 aaKnown RBP7.85□□□□□ -1.15
GYPA-203ENST00000503627 GIGYF1O75420 1035 aaPredicted RBP7.85□□□□□ -1.15
GYPA-203ENST00000503627 LDHBP07195 334 aaKnown RBP7.85□□□□□ -1.15
GYPA-203ENST00000503627 PTPN5P54829 565 aa7.85□□□□□ -1.15
GYPA-203ENST00000503627 XPCQ01831 940 aaPredicted RBP7.85□□□□□ -1.15
GYPA-203ENST00000503627 NAA30Q147X3 362 aaPredicted RBP7.85□□□□□ -1.15
GYPA-203ENST00000503627 IFFO2Q5TF58 517 aa7.85□□□□□ -1.15
GYPA-203ENST00000503627 SH3BP5LQ7L8J4 393 aa7.85□□□□□ -1.15
GYPA-203ENST00000503627 TMC4Q7Z404 712 aa7.85□□□□□ -1.15
GYPA-203ENST00000503627 DUSP9Q99956 384 aaKnown RBP7.85□□□□□ -1.15
GYPA-203ENST00000503627 CCSER2Q9H7U1 834 aa7.85□□□□□ -1.15
GYPA-203ENST00000503627 VPS9D1Q9Y2B5 631 aa7.85□□□□□ -1.15
GYPA-203ENST00000503627 TMA7Q9Y2S6 64 aaKnown RBP7.85□□□□□ -1.15
GYPA-203ENST00000503627 NDUFB5O43674 189 aa7.84□□□□□ -1.15
GYPA-203ENST00000503627 MPSTP25325 297 aa7.84□□□□□ -1.15
GYPA-203ENST00000503627 ZBTB33Q86T24 672 aa7.84□□□□□ -1.15
GYPA-203ENST00000503627 DZIP3Q86Y13 1208 aaKnown RBP7.84□□□□□ -1.15
GYPA-203ENST00000503627 GAS2L2Q8NHY3 880 aa7.84□□□□□ -1.15
GYPA-203ENST00000503627 RNF34Q969K3 372 aa7.84□□□□□ -1.15
GYPA-203ENST00000503627 ARMC5Q96C12 935 aa7.84□□□□□ -1.15
GYPA-203ENST00000503627 CAPN10Q9HC96 672 aa7.84□□□□□ -1.15
GYPA-203ENST00000503627 NLRP2Q9NX02 1062 aa7.84□□□□□ -1.15
GYPA-203ENST00000503627 TTBK1Q5TCY1 1321 aaPredicted RBP7.83□□□□□ -1.16
GYPA-203ENST00000503627 IGHA2P01877 340 aa7.83□□□□□ -1.16
GYPA-203ENST00000503627 ATP2B1P20020 1258 aa7.83□□□□□ -1.16
GYPA-203ENST00000503627 DAB2P98082 770 aa7.83□□□□□ -1.16
GYPA-203ENST00000503627 CCDC144BQ3MJ40 725 aa7.83□□□□□ -1.16
GYPA-203ENST00000503627 LAPTM4BQ86VI4 370 aa7.83□□□□□ -1.16
GYPA-203ENST00000503627 NUDT12Q9BQG2 462 aa7.83□□□□□ -1.16
GYPA-203ENST00000503627 ACBD3Q9H3P7 528 aa7.83□□□□□ -1.16
GYPA-203ENST00000503627 MRS2Q9HD23 443 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms