RNA–Protein interactions for RNA: ENST00000503534.5

CLPTM1L-204, Transcript of CLPTM1 like, humanhuman

TSL 2

Gene CLPTM1L, Length 742 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1L-204ENST00000503534 USP54Q70EL1 1684 aa13.98□□□□□ -0.17
CLPTM1L-204ENST00000503534 PRIM1P49642 420 aaKnown RBP13.98□□□□□ -0.17
CLPTM1L-204ENST00000503534 FLAD1Q8NFF5 587 aa13.98□□□□□ -0.17
CLPTM1L-204ENST00000503534 MON2Q7Z3U7 1717 aa13.98□□□□□ -0.17
CLPTM1L-204ENST00000503534 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.97□□□□□ -0.17
CLPTM1L-204ENST00000503534 USP31Q70CQ4 1352 aa13.96□□□□□ -0.17
CLPTM1L-204ENST00000503534 USP47Q96K76 1375 aa13.96□□□□□ -0.17
CLPTM1L-204ENST00000503534 C5P01031 1676 aa13.95□□□□□ -0.18
CLPTM1L-204ENST00000503534 KIF3CO14782 793 aa13.95□□□□□ -0.18
CLPTM1L-204ENST00000503534 IGSF1Q8N6C5 1336 aa13.93□□□□□ -0.18
CLPTM1L-204ENST00000503534 TOMM70O94826 608 aa13.93□□□□□ -0.18
CLPTM1L-204ENST00000503534 NSD2O96028 1365 aa13.93□□□□□ -0.18
CLPTM1L-204ENST00000503534 NME9Q86XW9 330 aa13.92□□□□□ -0.18
CLPTM1L-204ENST00000503534 ZCRB1Q8TBF4 217 aaKnown RBP13.92□□□□□ -0.18
CLPTM1L-204ENST00000503534 LTV1Q96GA3 475 aaPredicted RBP13.92□□□□□ -0.18
CLPTM1L-204ENST00000503534 WDR90Q96KV7 1748 aa13.91□□□□□ -0.18
CLPTM1L-204ENST00000503534 HDGFL2Q7Z4V5 671 aaPredicted RBP13.91□□□□□ -0.18
CLPTM1L-204ENST00000503534 DNAJC5GQ8N7S2 189 aa13.91□□□□□ -0.18
CLPTM1L-204ENST00000503534 IP6K1Q92551 441 aa13.91□□□□□ -0.18
CLPTM1L-204ENST00000503534 TAF1LQ8IZX4 1826 aa13.9□□□□□ -0.18
CLPTM1L-204ENST00000503534 CAPN15O75808 1086 aa13.9□□□□□ -0.18
CLPTM1L-204ENST00000503534 WWC3Q9ULE0 1092 aa13.9□□□□□ -0.18
CLPTM1L-204ENST00000503534 NSD3Q9BZ95 1437 aa13.89□□□□□ -0.19
CLPTM1L-204ENST00000503534 AK7Q96M32 723 aa13.88□□□□□ -0.19
CLPTM1L-204ENST00000503534 CICQ96RK0 1608 aaPredicted RBP13.88□□□□□ -0.19
CLPTM1L-204ENST00000503534 SBNO2Q9Y2G9 1366 aa13.87□□□□□ -0.19
CLPTM1L-204ENST00000503534 COL13A1Q5TAT6 717 aaPredicted RBP13.87□□□□□ -0.19
CLPTM1L-204ENST00000503534 C16orf71Q8IYS4 520 aaPredicted RBP13.87□□□□□ -0.19
CLPTM1L-204ENST00000503534 TNS4Q8IZW8 715 aa13.87□□□□□ -0.19
CLPTM1L-204ENST00000503534 TMC1Q8TDI8 760 aa13.87□□□□□ -0.19
CLPTM1L-204ENST00000503534 EDC4Q6P2E9 1401 aaKnown RBP13.87□□□□□ -0.19
CLPTM1L-204ENST00000503534 ROCK2O75116 1388 aaKnown RBP13.86□□□□□ -0.19
CLPTM1L-204ENST00000503534 KLRG1Q96E93 195 aa13.86□□□□□ -0.19
CLPTM1L-204ENST00000503534 C4BP0C0L5 1744 aa13.86□□□□□ -0.19
CLPTM1L-204ENST00000503534 CGNL1Q0VF96 1302 aa13.86□□□□□ -0.19
CLPTM1L-204ENST00000503534 RGPD2P0DJD1 1756 aa13.86□□□□□ -0.19
CLPTM1L-204ENST00000503534 PALLDQ8WX93 1383 aa13.85□□□□□ -0.19
CLPTM1L-204ENST00000503534 AMPHP49418 695 aa13.85□□□□□ -0.19
CLPTM1L-204ENST00000503534 PRELPP51888 382 aa13.85□□□□□ -0.19
CLPTM1L-204ENST00000503534 TERF2IPQ9NYB0 399 aa13.85□□□□□ -0.19
CLPTM1L-204ENST00000503534 MEGF6O75095 1541 aa13.85□□□□□ -0.19
CLPTM1L-204ENST00000503534 PHF14O94880 888 aa13.84□□□□□ -0.19
CLPTM1L-204ENST00000503534 JMYQ8N9B5 988 aa13.84□□□□□ -0.19
CLPTM1L-204ENST00000503534 RBM46Q8TBY0 533 aaKnown RBP13.84□□□□□ -0.19
CLPTM1L-204ENST00000503534 RAPGEF4Q8WZA2 1011 aa13.84□□□□□ -0.19
CLPTM1L-204ENST00000503534 SMARCC1Q92922 1105 aaPredicted RBP13.84□□□□□ -0.19
CLPTM1L-204ENST00000503534 CD163L1Q9NR16 1453 aa13.84□□□□□ -0.19
CLPTM1L-204ENST00000503534 UBR3Q6ZT12 1888 aa13.84□□□□□ -0.19
CLPTM1L-204ENST00000503534 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.82□□□□□ -0.2
CLPTM1L-204ENST00000503534 TATP17735 454 aaPredicted RBP13.82□□□□□ -0.2
CLPTM1L-204ENST00000503534 SSFA2P28290 1259 aa13.82□□□□□ -0.2
CLPTM1L-204ENST00000503534 HOXC9P31274 260 aa13.82□□□□□ -0.2
CLPTM1L-204ENST00000503534 FSTL1Q12841 308 aa13.82□□□□□ -0.2
CLPTM1L-204ENST00000503534 MPRIPQ6WCQ1 1025 aa13.82□□□□□ -0.2
CLPTM1L-204ENST00000503534 COG3Q96JB2 828 aa13.82□□□□□ -0.2
CLPTM1L-204ENST00000503534 NMRK2Q9NPI5 230 aa13.82□□□□□ -0.2
CLPTM1L-204ENST00000503534 BCS1LQ9Y276 419 aa13.82□□□□□ -0.2
CLPTM1L-204ENST00000503534 PCDH11XQ9BZA7 1347 aa13.82□□□□□ -0.2
CLPTM1L-204ENST00000503534 PCDH11YQ9BZA8 1340 aa13.82□□□□□ -0.2
CLPTM1L-204ENST00000503534 SMG6Q86US8 1419 aaKnown RBP13.81□□□□□ -0.2
CLPTM1L-204ENST00000503534 TOGARAM1Q9Y4F4 1720 aa13.81□□□□□ -0.2
CLPTM1L-204ENST00000503534 ARHGAP27Q6ZUM4 889 aa13.81□□□□□ -0.2
CLPTM1L-204ENST00000503534 L3MBTL2Q969R5 705 aa13.81□□□□□ -0.2
CLPTM1L-204ENST00000503534 TGFB2P61812 414 aa13.8□□□□□ -0.2
CLPTM1L-204ENST00000503534 SLC12A5Q9H2X9 1139 aa13.8□□□□□ -0.2
CLPTM1L-204ENST00000503534 MAP3K19Q56UN5 1328 aa13.8□□□□□ -0.2
CLPTM1L-204ENST00000503534 PLEKHG2Q9H7P9 1386 aa13.8□□□□□ -0.2
CLPTM1L-204ENST00000503534 N4BP2Q86UW6 1770 aaPredicted RBP13.79□□□□□ -0.2
CLPTM1L-204ENST00000503534 ITGB4P16144 1822 aa13.79□□□□□ -0.2
CLPTM1L-204ENST00000503534 KIF13BQ9NQT8 1826 aa13.79□□□□□ -0.2
CLPTM1L-204ENST00000503534 A0A1W2PP64 1363 aa13.79□□□□□ -0.2
CLPTM1L-204ENST00000503534 HTRA3P83110 453 aa13.78□□□□□ -0.2
CLPTM1L-204ENST00000503534 KDM2BQ8NHM5 1336 aa13.78□□□□□ -0.2
CLPTM1L-204ENST00000503534 RTL1A6NKG5 1358 aa13.78□□□□□ -0.2
CLPTM1L-204ENST00000503534 PXDNLA1KZ92 1463 aa13.78□□□□□ -0.2
CLPTM1L-204ENST00000503534 FCHSD2O94868 740 aa13.77□□□□□ -0.21
CLPTM1L-204ENST00000503534 NBPF6Q5VWK0 638 aa13.77□□□□□ -0.21
CLPTM1L-204ENST00000503534 USHBP1Q8N6Y0 703 aa13.77□□□□□ -0.21
CLPTM1L-204ENST00000503534 NBPF4Q96M43 638 aa13.77□□□□□ -0.21
CLPTM1L-204ENST00000503534 KIAA1551Q9HCM1 1747 aa13.76□□□□□ -0.21
CLPTM1L-204ENST00000503534 GNPATO15228 680 aa13.76□□□□□ -0.21
CLPTM1L-204ENST00000503534 MMP10P09238 476 aa13.76□□□□□ -0.21
CLPTM1L-204ENST00000503534 AMIGO3Q86WK7 504 aa13.76□□□□□ -0.21
CLPTM1L-204ENST00000503534 PKD1L3Q7Z443 1732 aa13.76□□□□□ -0.21
CLPTM1L-204ENST00000503534 A0A0G2JLW4 131 aa13.75□□□□□ -0.21
CLPTM1L-204ENST00000503534 C9orf131Q5VYM1 1079 aa13.75□□□□□ -0.21
CLPTM1L-204ENST00000503534 SMIM5Q71RC9 77 aa13.75□□□□□ -0.21
CLPTM1L-204ENST00000503534 CCDC87Q9NVE4 849 aa13.75□□□□□ -0.21
CLPTM1L-204ENST00000503534 TNRC6CQ9HCJ0 1690 aaKnown RBP13.75□□□□□ -0.21
CLPTM1L-204ENST00000503534 LOC102724428A0A0B4J2F2 783 aa13.74□□□□□ -0.21
CLPTM1L-204ENST00000503534 SIK1P57059 783 aa13.74□□□□□ -0.21
CLPTM1L-204ENST00000503534 NLGN1Q8N2Q7 840 aa13.74□□□□□ -0.21
CLPTM1L-204ENST00000503534 SMC1BQ8NDV3 1235 aa13.74□□□□□ -0.21
CLPTM1L-204ENST00000503534 ARFGEF1Q9Y6D6 1849 aa13.74□□□□□ -0.21
CLPTM1L-204ENST00000503534 FBLN1P23142 703 aa13.73□□□□□ -0.21
CLPTM1L-204ENST00000503534 LINC00116Q8NCU8 138 aa13.73□□□□□ -0.21
CLPTM1L-204ENST00000503534 PUS7Q96PZ0 661 aaKnown RBP13.73□□□□□ -0.21
CLPTM1L-204ENST00000503534 KCPQ6ZWJ8 1503 aa13.73□□□□□ -0.21
CLPTM1L-204ENST00000503534 MAP2P11137 1827 aaKnown RBP13.73□□□□□ -0.21
CLPTM1L-204ENST00000503534 C10orf71Q711Q0 1435 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 649 ms