RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 WDR17Q8IZU2 1322 aa11.79□□□□□ -0.52
NR1I3-216ENST00000502848 MAP3K5Q99683 1374 aa11.79□□□□□ -0.52
NR1I3-216ENST00000502848 ZNF853P0CG23 659 aa11.78□□□□□ -0.52
NR1I3-216ENST00000502848 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.78□□□□□ -0.52
NR1I3-216ENST00000502848 CFAP44Q96MT7 982 aa11.78□□□□□ -0.52
NR1I3-216ENST00000502848 SOS1Q07889 1333 aaPredicted RBP11.78□□□□□ -0.52
NR1I3-216ENST00000502848 GNAT3A8MTJ3 354 aa11.77□□□□□ -0.53
NR1I3-216ENST00000502848 PLEKHO1Q53GL0 409 aaPredicted RBP11.77□□□□□ -0.53
NR1I3-216ENST00000502848 CERKQ8TCT0 537 aa11.77□□□□□ -0.53
NR1I3-216ENST00000502848 RTF1Q92541 710 aaKnown RBP11.77□□□□□ -0.53
NR1I3-216ENST00000502848 SPINK5Q9NQ38 1064 aaPredicted RBP11.77□□□□□ -0.53
NR1I3-216ENST00000502848 DLG5Q8TDM6 1919 aa11.77□□□□□ -0.53
NR1I3-216ENST00000502848 FANCIQ9NVI1 1328 aa11.77□□□□□ -0.53
NR1I3-216ENST00000502848 CEMIPQ8WUJ3 1361 aa11.77□□□□□ -0.53
NR1I3-216ENST00000502848 ADAMTS7Q9UKP4 1686 aa11.76□□□□□ -0.53
NR1I3-216ENST00000502848 UBAP1LF5GYI3 381 aa11.76□□□□□ -0.53
NR1I3-216ENST00000502848 RRP1P56182 461 aaKnown RBP11.76□□□□□ -0.53
NR1I3-216ENST00000502848 MTHFSDQ2M296 383 aaKnown RBP11.76□□□□□ -0.53
NR1I3-216ENST00000502848 CABLES1Q8TDN4 633 aa11.76□□□□□ -0.53
NR1I3-216ENST00000502848 CRB1P82279 1406 aa11.76□□□□□ -0.53
NR1I3-216ENST00000502848 PKD1L3Q7Z443 1732 aa11.75□□□□□ -0.53
NR1I3-216ENST00000502848 AKAP4Q5JQC9 854 aa11.75□□□□□ -0.53
NR1I3-216ENST00000502848 RAPGEF4Q8WZA2 1011 aa11.75□□□□□ -0.53
NR1I3-216ENST00000502848 LTV1Q96GA3 475 aaPredicted RBP11.75□□□□□ -0.53
NR1I3-216ENST00000502848 CARD10Q9BWT7 1032 aa11.75□□□□□ -0.53
NR1I3-216ENST00000502848 JCADQ9P266 1359 aa11.75□□□□□ -0.53
NR1I3-216ENST00000502848 PARP4Q9UKK3 1724 aaKnown RBP11.74□□□□□ -0.53
NR1I3-216ENST00000502848 RGPD5Q99666 1765 aa11.74□□□□□ -0.53
NR1I3-216ENST00000502848 ZBTB7CA1YPR0 619 aa11.74□□□□□ -0.53
NR1I3-216ENST00000502848 CHL1O00533 1208 aa11.74□□□□□ -0.53
NR1I3-216ENST00000502848 BRPF1P55201 1214 aaPredicted RBP11.74□□□□□ -0.53
NR1I3-216ENST00000502848 PLCH1Q4KWH8 1693 aa11.74□□□□□ -0.53
NR1I3-216ENST00000502848 SENP3-EIF4A1A0A087X0R7 540 aa11.73□□□□□ -0.53
NR1I3-216ENST00000502848 TATP17735 454 aaPredicted RBP11.73□□□□□ -0.53
NR1I3-216ENST00000502848 ALDH1L2Q3SY69 923 aa11.73□□□□□ -0.53
NR1I3-216ENST00000502848 SPATA31A6Q5VVP1 1343 aa11.73□□□□□ -0.53
NR1I3-216ENST00000502848 CHMP4AQ9BY43 222 aa11.73□□□□□ -0.53
NR1I3-216ENST00000502848 NLRP2Q9NX02 1062 aa11.73□□□□□ -0.53
NR1I3-216ENST00000502848 NWD2Q9ULI1 1742 aa11.73□□□□□ -0.53
NR1I3-216ENST00000502848 SPG7Q9UQ90 795 aa11.73□□□□□ -0.53
NR1I3-216ENST00000502848 RGPD2P0DJD1 1756 aa11.72□□□□□ -0.53
NR1I3-216ENST00000502848 HSP90AB1P08238 724 aaKnown RBP11.72□□□□□ -0.53
NR1I3-216ENST00000502848 CSB-PGBD3P0DP91 1061 aa11.72□□□□□ -0.53
NR1I3-216ENST00000502848 CHRNA2Q15822 529 aa11.72□□□□□ -0.53
NR1I3-216ENST00000502848 C1orf141Q5JVX7 400 aa11.72□□□□□ -0.53
NR1I3-216ENST00000502848 MEGF6O75095 1541 aa11.71□□□□□ -0.53
NR1I3-216ENST00000502848 MRC1P22897 1456 aa11.71□□□□□ -0.53
NR1I3-216ENST00000502848 FAM83GA6ND36 823 aa11.71□□□□□ -0.53
NR1I3-216ENST00000502848 RARSP54136 660 aaKnown RBP11.71□□□□□ -0.53
NR1I3-216ENST00000502848 AAMPQ13685 434 aa11.71□□□□□ -0.53
NR1I3-216ENST00000502848 FKBP8Q14318 412 aa11.71□□□□□ -0.53
NR1I3-216ENST00000502848 ZNF530Q6P9A1 599 aaPredicted RBP11.71□□□□□ -0.53
NR1I3-216ENST00000502848 USHBP1Q8N6Y0 703 aa11.71□□□□□ -0.53
NR1I3-216ENST00000502848 KIF16BQ96L93 1317 aa11.7□□□□□ -0.54
NR1I3-216ENST00000502848 MS4A1P11836 297 aa11.7□□□□□ -0.54
NR1I3-216ENST00000502848 PDE3AQ14432 1141 aa11.7□□□□□ -0.54
NR1I3-216ENST00000502848 CDCA7Q9BWT1 371 aaPredicted RBP11.7□□□□□ -0.54
NR1I3-216ENST00000502848 MBIPQ9NS73 344 aa11.7□□□□□ -0.54
NR1I3-216ENST00000502848 SLIT2O94813 1529 aa11.7□□□□□ -0.54
NR1I3-216ENST00000502848 PCDH11XQ9BZA7 1347 aa11.69□□□□□ -0.54
NR1I3-216ENST00000502848 PCDH11YQ9BZA8 1340 aa11.69□□□□□ -0.54
NR1I3-216ENST00000502848 HOXB7P09629 217 aa11.69□□□□□ -0.54
NR1I3-216ENST00000502848 PIP4K2BP78356 416 aa11.69□□□□□ -0.54
NR1I3-216ENST00000502848 EXOSC9Q06265 439 aaKnown RBP11.69□□□□□ -0.54
NR1I3-216ENST00000502848 C1QBPQ07021 282 aaKnown RBP11.69□□□□□ -0.54
NR1I3-216ENST00000502848 TAF7Q15545 349 aaPredicted RBP11.69□□□□□ -0.54
NR1I3-216ENST00000502848 TOM1L2Q6ZVM7 507 aa11.69□□□□□ -0.54
NR1I3-216ENST00000502848 TSR2Q969E8 191 aaKnown RBP11.69□□□□□ -0.54
NR1I3-216ENST00000502848 THRAP3Q9Y2W1 955 aaKnown RBP11.69□□□□□ -0.54
NR1I3-216ENST00000502848 DISP2A7MBM2 1401 aa11.69□□□□□ -0.54
NR1I3-216ENST00000502848 MCM10Q7L590 875 aa11.68□□□□□ -0.54
NR1I3-216ENST00000502848 IFNL2Q8IZJ0 200 aa11.68□□□□□ -0.54
NR1I3-216ENST00000502848 IL17REQ8NFR9 667 aa11.68□□□□□ -0.54
NR1I3-216ENST00000502848 NRAPQ86VF7 1730 aa11.68□□□□□ -0.54
NR1I3-216ENST00000502848 IL2RBP14784 551 aa11.67□□□□□ -0.54
NR1I3-216ENST00000502848 EVA1CP58658 441 aa11.67□□□□□ -0.54
NR1I3-216ENST00000502848 CACNB1Q02641 598 aaPredicted RBP11.67□□□□□ -0.54
NR1I3-216ENST00000502848 DCAF5Q96JK2 942 aa11.67□□□□□ -0.54
NR1I3-216ENST00000502848 THUMPD2Q9BTF0 503 aaKnown RBP11.67□□□□□ -0.54
NR1I3-216ENST00000502848 PPP4R2Q9NY27 417 aa11.67□□□□□ -0.54
NR1I3-216ENST00000502848 IPO8O15397 1037 aaKnown RBP11.66□□□□□ -0.54
NR1I3-216ENST00000502848 RNMTO43148 476 aaKnown RBP11.66□□□□□ -0.54
NR1I3-216ENST00000502848 VAMP4O75379 141 aa11.66□□□□□ -0.54
NR1I3-216ENST00000502848 PLEKHG5O94827 1062 aa11.66□□□□□ -0.54
NR1I3-216ENST00000502848 PHKG2P15735 406 aa11.66□□□□□ -0.54
NR1I3-216ENST00000502848 TEFQ10587 303 aa11.66□□□□□ -0.54
NR1I3-216ENST00000502848 DCTN1Q14203 1278 aa11.66□□□□□ -0.54
NR1I3-216ENST00000502848 NKX1-1Q15270 411 aaPredicted RBP11.66□□□□□ -0.54
NR1I3-216ENST00000502848 TWISTNBQ3B726 338 aaPredicted RBP11.66□□□□□ -0.54
NR1I3-216ENST00000502848 SAMD1Q6SPF0 538 aaPredicted RBP11.66□□□□□ -0.54
NR1I3-216ENST00000502848 ARHGAP45Q92619 1136 aa11.66□□□□□ -0.54
NR1I3-216ENST00000502848 BTG4Q9NY30 223 aa11.66□□□□□ -0.54
NR1I3-216ENST00000502848 TSPYL4Q9UJ04 414 aa11.66□□□□□ -0.54
NR1I3-216ENST00000502848 KDM3BQ7LBC6 1761 aa11.66□□□□□ -0.54
NR1I3-216ENST00000502848 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.66□□□□□ -0.54
NR1I3-216ENST00000502848 LRP6O75581 1613 aa11.65□□□□□ -0.54
NR1I3-216ENST00000502848 SIPA1L3O60292 1781 aaPredicted RBP11.65□□□□□ -0.54
NR1I3-216ENST00000502848 ZCRB1Q8TBF4 217 aaKnown RBP11.65□□□□□ -0.54
NR1I3-216ENST00000502848 WNK3Q9BYP7 1800 aa11.65□□□□□ -0.55
NR1I3-216ENST00000502848 SCN11AQ9UI33 1791 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms