RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 CXXC1Q9P0U4 656 aaPredicted RBP8.85□□□□□ -0.99
HMGB1P3-201ENST00000502802 ERCC3P19447 782 aa8.84□□□□□ -0.99
HMGB1P3-201ENST00000502802 SCNN1AP37088 669 aa8.84□□□□□ -0.99
HMGB1P3-201ENST00000502802 OCLNQ16625 522 aa8.84□□□□□ -0.99
HMGB1P3-201ENST00000502802 TAS1R3Q7RTX0 852 aa8.84□□□□□ -0.99
HMGB1P3-201ENST00000502802 PRIMPOLQ96LW4 560 aa8.84□□□□□ -0.99
HMGB1P3-201ENST00000502802 ZBTB24O43167 697 aaPredicted RBP8.82□□□□□ -1
HMGB1P3-201ENST00000502802 DNAJC14Q6Y2X3 702 aaPredicted RBP8.82□□□□□ -1
HMGB1P3-201ENST00000502802 KCTD15Q96SI1 283 aaPredicted RBP8.82□□□□□ -1
HMGB1P3-201ENST00000502802 HINFPQ9BQA5 517 aa8.82□□□□□ -1
HMGB1P3-201ENST00000502802 MYCP01106 439 aaPredicted RBP8.81□□□□□ -1
HMGB1P3-201ENST00000502802 BIN2Q9UBW5 565 aaPredicted RBP8.81□□□□□ -1
HMGB1P3-201ENST00000502802 EGFL7Q9UHF1 273 aa8.81□□□□□ -1
HMGB1P3-201ENST00000502802 M0R2N6 131 aa8.8□□□□□ -1
HMGB1P3-201ENST00000502802 PPEF1O14829 653 aaPredicted RBP8.8□□□□□ -1
HMGB1P3-201ENST00000502802 VARSP26640 1264 aaKnown RBP8.8□□□□□ -1
HMGB1P3-201ENST00000502802 RAB15P59190 212 aa8.8□□□□□ -1
HMGB1P3-201ENST00000502802 RBM47A0AV96 593 aaKnown RBP8.79□□□□□ -1
HMGB1P3-201ENST00000502802 ABL1P00519 1130 aa8.79□□□□□ -1
HMGB1P3-201ENST00000502802 MARSP56192 900 aaKnown RBP8.79□□□□□ -1
HMGB1P3-201ENST00000502802 VASH1Q7L8A9 365 aaPredicted RBP8.78□□□□□ -1
HMGB1P3-201ENST00000502802 MAP4K5Q9Y4K4 846 aa8.78□□□□□ -1
HMGB1P3-201ENST00000502802 LGR5O75473 907 aa8.77□□□□□ -1.01
HMGB1P3-201ENST00000502802 WEE1P30291 646 aa8.77□□□□□ -1.01
HMGB1P3-201ENST00000502802 WNT7BP56706 349 aa8.77□□□□□ -1.01
HMGB1P3-201ENST00000502802 TRIM32Q13049 653 aa8.77□□□□□ -1.01
HMGB1P3-201ENST00000502802 INTS6LQ5JSJ4 861 aaKnown RBP8.77□□□□□ -1.01
HMGB1P3-201ENST00000502802 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.77□□□□□ -1.01
HMGB1P3-201ENST00000502802 TSEN2Q8NCE0 465 aaKnown RBP8.77□□□□□ -1.01
HMGB1P3-201ENST00000502802 ESF1Q9H501 851 aaKnown RBP8.77□□□□□ -1.01
HMGB1P3-201ENST00000502802 ERVH48-1M5A8F1 160 aa8.76□□□□□ -1.01
HMGB1P3-201ENST00000502802 ICMTO60725 284 aa8.76□□□□□ -1.01
HMGB1P3-201ENST00000502802 SKOR1P84550 965 aa8.76□□□□□ -1.01
HMGB1P3-201ENST00000502802 NOM1Q5C9Z4 860 aaKnown RBP8.76□□□□□ -1.01
HMGB1P3-201ENST00000502802 UNCXA6NJT0 531 aa8.75□□□□□ -1.01
HMGB1P3-201ENST00000502802 RNF223E7ERA6 249 aa8.75□□□□□ -1.01
HMGB1P3-201ENST00000502802 H3BRB1 525 aa8.75□□□□□ -1.01
HMGB1P3-201ENST00000502802 PTCD1O75127 700 aaKnown RBP8.75□□□□□ -1.01
HMGB1P3-201ENST00000502802 SCTRP47872 440 aa8.75□□□□□ -1.01
HMGB1P3-201ENST00000502802 KCNC4Q03721 635 aa8.75□□□□□ -1.01
HMGB1P3-201ENST00000502802 ZNF211Q13398 564 aaPredicted RBP8.75□□□□□ -1.01
HMGB1P3-201ENST00000502802 ANKLE1Q8NAG6 615 aa8.75□□□□□ -1.01
HMGB1P3-201ENST00000502802 TRIM52Q96A61 297 aa8.75□□□□□ -1.01
HMGB1P3-201ENST00000502802 TUT1Q9H6E5 874 aaKnown RBP8.75□□□□□ -1.01
HMGB1P3-201ENST00000502802 ANO2Q9NQ90 1003 aa8.75□□□□□ -1.01
HMGB1P3-201ENST00000502802 ZNF358Q9NW07 568 aa8.75□□□□□ -1.01
HMGB1P3-201ENST00000502802 GGCXP38435 758 aa8.74□□□□□ -1.01
HMGB1P3-201ENST00000502802 ERVK-9P63128 1117 aa8.74□□□□□ -1.01
HMGB1P3-201ENST00000502802 CC2D2BQ6DHV5 1058 aa8.74□□□□□ -1.01
HMGB1P3-201ENST00000502802 GLYCTKQ8IVS8 523 aa8.74□□□□□ -1.01
HMGB1P3-201ENST00000502802 GTF3C2Q8WUA4 911 aaPredicted RBP8.74□□□□□ -1.01
HMGB1P3-201ENST00000502802 MKNK1Q9BUB5 465 aa8.74□□□□□ -1.01
HMGB1P3-201ENST00000502802 SEPT3Q9UH03 358 aa8.74□□□□□ -1.01
HMGB1P3-201ENST00000502802 TMEM229AB2RXF0 380 aa8.73□□□□□ -1.01
HMGB1P3-201ENST00000502802 C21orf2O43822 256 aa8.73□□□□□ -1.01
HMGB1P3-201ENST00000502802 FKBP5Q13451 457 aaPredicted RBP8.73□□□□□ -1.01
HMGB1P3-201ENST00000502802 PLA2G2CQ5R387 149 aa8.73□□□□□ -1.01
HMGB1P3-201ENST00000502802 ANKRD33BA6NCL7 494 aa8.72□□□□□ -1.01
HMGB1P3-201ENST00000502802 IGFBP4P22692 258 aa8.72□□□□□ -1.01
HMGB1P3-201ENST00000502802 RPIAP49247 311 aa8.72□□□□□ -1.01
HMGB1P3-201ENST00000502802 FKBP4Q02790 459 aaKnown RBP eCLIP8.72□□□□□ -1.01
HMGB1P3-201ENST00000502802 SF3B2Q13435 895 aaKnown RBP8.72□□□□□ -1.01
HMGB1P3-201ENST00000502802 EHBP1Q8NDI1 1231 aa8.72□□□□□ -1.01
HMGB1P3-201ENST00000502802 COL26A1Q96A83 441 aa8.72□□□□□ -1.01
HMGB1P3-201ENST00000502802 CDK15Q96Q40 435 aa8.72□□□□□ -1.01
HMGB1P3-201ENST00000502802 BCL2L13Q9BXK5 485 aa8.72□□□□□ -1.01
HMGB1P3-201ENST00000502802 DNMT3AQ9Y6K1 912 aaPredicted RBP8.72□□□□□ -1.01
HMGB1P3-201ENST00000502802 BACH1O14867 736 aa8.71□□□□□ -1.02
HMGB1P3-201ENST00000502802 FOXO3O43524 673 aa8.71□□□□□ -1.02
HMGB1P3-201ENST00000502802 ITGBL1O95965 494 aaPredicted RBP8.71□□□□□ -1.02
HMGB1P3-201ENST00000502802 DHX9Q08211 1270 aaKnown RBP8.71□□□□□ -1.02
HMGB1P3-201ENST00000502802 ARID5BQ14865 1188 aa8.71□□□□□ -1.02
HMGB1P3-201ENST00000502802 PURBQ96QR8 312 aaKnown RBP8.71□□□□□ -1.02
HMGB1P3-201ENST00000502802 OSBPL3Q9H4L5 887 aa8.71□□□□□ -1.02
HMGB1P3-201ENST00000502802 WASLO00401 505 aaPredicted RBP8.7□□□□□ -1.02
HMGB1P3-201ENST00000502802 ZNF16P17020 682 aaPredicted RBP8.7□□□□□ -1.02
HMGB1P3-201ENST00000502802 SCNN1DP51172 638 aa8.7□□□□□ -1.02
HMGB1P3-201ENST00000502802 GDF10P55107 478 aa8.7□□□□□ -1.02
HMGB1P3-201ENST00000502802 CAPN12Q6ZSI9 719 aa8.7□□□□□ -1.02
HMGB1P3-201ENST00000502802 TMPRSS4Q9NRS4 437 aa8.7□□□□□ -1.02
HMGB1P3-201ENST00000502802 MAPK1P28482 360 aa8.69□□□□□ -1.02
HMGB1P3-201ENST00000502802 ECM1Q16610 540 aa8.69□□□□□ -1.02
HMGB1P3-201ENST00000502802 RC3H1Q5TC82 1133 aaKnown RBP8.69□□□□□ -1.02
HMGB1P3-201ENST00000502802 NPAS4Q8IUM7 802 aa8.69□□□□□ -1.02
HMGB1P3-201ENST00000502802 CDAN1Q8IWY9 1227 aa8.69□□□□□ -1.02
HMGB1P3-201ENST00000502802 TNS4Q8IZW8 715 aa8.69□□□□□ -1.02
HMGB1P3-201ENST00000502802 MPNDQ8N594 471 aa8.69□□□□□ -1.02
HMGB1P3-201ENST00000502802 MRRFQ96E11 262 aaKnown RBP8.69□□□□□ -1.02
HMGB1P3-201ENST00000502802 CYLDQ9NQC7 956 aa8.69□□□□□ -1.02
HMGB1P3-201ENST00000502802 CD2BP2O95400 341 aaKnown RBP8.68□□□□□ -1.02
HMGB1P3-201ENST00000502802 INHAP05111 366 aa8.68□□□□□ -1.02
HMGB1P3-201ENST00000502802 FSHRP23945 695 aa8.68□□□□□ -1.02
HMGB1P3-201ENST00000502802 GRM5P41594 1212 aa8.68□□□□□ -1.02
HMGB1P3-201ENST00000502802 NAA30Q147X3 362 aaPredicted RBP8.68□□□□□ -1.02
HMGB1P3-201ENST00000502802 GAS2L2Q8NHY3 880 aa8.68□□□□□ -1.02
HMGB1P3-201ENST00000502802 GIPC2Q8TF65 315 aa8.68□□□□□ -1.02
HMGB1P3-201ENST00000502802 SCG3Q8WXD2 468 aaKnown RBP8.68□□□□□ -1.02
HMGB1P3-201ENST00000502802 DCTN4Q9UJW0 460 aa8.68□□□□□ -1.02
HMGB1P3-201ENST00000502802 ATAD2Q6PL18 1390 aa8.68□□□□□ -1.02
HMGB1P3-201ENST00000502802 ARHGAP4P98171 946 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms