RNA–Protein interactions for RNA: ENST00000502393.5

SFXN1-203, Transcript of sideroflexin 1, humanhuman

TSL 2 BASIC

Gene SFXN1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-203ENST00000502393 POLR3GLQ9BT43 218 aa27.28■■□□□ 1.96
SFXN1-203ENST00000502393 HSPA5P11021 654 aaKnown RBP27.27■■□□□ 1.96
SFXN1-203ENST00000502393 USHBP1Q8N6Y0 703 aa27.27■■□□□ 1.96
SFXN1-203ENST00000502393 PPP1R1BQ9UD71 204 aaPredicted RBP27.27■■□□□ 1.96
SFXN1-203ENST00000502393 EMILIN1Q9Y6C2 1016 aa27.26■■□□□ 1.95
SFXN1-203ENST00000502393 PDGFDQ9GZP0 370 aaPredicted RBP27.25■■□□□ 1.95
SFXN1-203ENST00000502393 SHANK3Q9BYB0 1731 aa27.24■■□□□ 1.95
SFXN1-203ENST00000502393 TATP17735 454 aaPredicted RBP27.24■■□□□ 1.95
SFXN1-203ENST00000502393 PRIM1P49642 420 aaKnown RBP27.24■■□□□ 1.95
SFXN1-203ENST00000502393 SYTL4Q96C24 671 aaPredicted RBP27.23■■□□□ 1.95
SFXN1-203ENST00000502393 KAT6BQ8WYB5 2073 aa27.23■■□□□ 1.95
SFXN1-203ENST00000502393 SLC27A3Q5K4L6 730 aa27.22■■□□□ 1.95
SFXN1-203ENST00000502393 PAPPAQ13219 1627 aa27.21■■□□□ 1.95
SFXN1-203ENST00000502393 PPM1GO15355 546 aaPredicted RBP27.21■■□□□ 1.95
SFXN1-203ENST00000502393 ZBTB7AO95365 584 aa27.21■■□□□ 1.95
SFXN1-203ENST00000502393 LRRC4BQ9NT99 713 aa27.21■■□□□ 1.95
SFXN1-203ENST00000502393 WASHC2AQ641Q2 1341 aa27.2■■□□□ 1.95
SFXN1-203ENST00000502393 DOT1LQ8TEK3 1739 aa27.19■■□□□ 1.94
SFXN1-203ENST00000502393 ANKRD26Q9UPS8 1709 aa27.19■■□□□ 1.94
SFXN1-203ENST00000502393 NSD2O96028 1365 aa27.18■■□□□ 1.94
SFXN1-203ENST00000502393 PCDH11XQ9BZA7 1347 aa27.17■■□□□ 1.94
SFXN1-203ENST00000502393 PCDH11YQ9BZA8 1340 aa27.17■■□□□ 1.94
SFXN1-203ENST00000502393 POLKQ9UBT6 870 aa27.17■■□□□ 1.94
SFXN1-203ENST00000502393 PTGER2P43116 358 aa27.16■■□□□ 1.94
SFXN1-203ENST00000502393 MTFR1LQ9H019 292 aa27.16■■□□□ 1.94
SFXN1-203ENST00000502393 PANK3Q9H999 370 aa27.16■■□□□ 1.94
SFXN1-203ENST00000502393 ATF5Q9Y2D1 282 aaPredicted RBP27.16■■□□□ 1.94
SFXN1-203ENST00000502393 NCAPD2Q15021 1401 aa27.16■■□□□ 1.94
SFXN1-203ENST00000502393 ZNF827Q17R98 1081 aa27.15■■□□□ 1.94
SFXN1-203ENST00000502393 MAP2P11137 1827 aaKnown RBP27.15■■□□□ 1.94
SFXN1-203ENST00000502393 AKT1S1Q96B36 256 aa27.14■■□□□ 1.94
SFXN1-203ENST00000502393 CYP27B1O15528 508 aa27.11■■□□□ 1.93
SFXN1-203ENST00000502393 TNNT2P45379 298 aaPredicted RBP27.11■■□□□ 1.93
SFXN1-203ENST00000502393 EYA1Q99502 592 aa27.11■■□□□ 1.93
SFXN1-203ENST00000502393 LY75O60449 1722 aa27.1■■□□□ 1.93
SFXN1-203ENST00000502393 SGIP1Q9BQI5 828 aa27.09■■□□□ 1.93
SFXN1-203ENST00000502393 CCNL1Q9UK58 526 aaPredicted RBP27.08■■□□□ 1.93
SFXN1-203ENST00000502393 SPG7Q9UQ90 795 aa27.08■■□□□ 1.93
SFXN1-203ENST00000502393 PKD1L3Q7Z443 1732 aa27.07■■□□□ 1.92
SFXN1-203ENST00000502393 DCAF8L1A6NGE4 600 aa27.07■■□□□ 1.92
SFXN1-203ENST00000502393 KCNQ4P56696 695 aa27.07■■□□□ 1.92
SFXN1-203ENST00000502393 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.07■■□□□ 1.92
SFXN1-203ENST00000502393 EIF4A2Q14240 407 aaKnown RBP27.06■■□□□ 1.92
SFXN1-203ENST00000502393 SLC16A10Q8TF71 515 aa27.06■■□□□ 1.92
SFXN1-203ENST00000502393 TFCP2L1Q9NZI6 479 aa27.06■■□□□ 1.92
SFXN1-203ENST00000502393 QSER1Q2KHR3 1735 aa27.05■■□□□ 1.92
SFXN1-203ENST00000502393 NKX1-1Q15270 411 aaPredicted RBP27.05■■□□□ 1.92
SFXN1-203ENST00000502393 HMGB2P26583 209 aaKnown RBP27.04■■□□□ 1.92
SFXN1-203ENST00000502393 MPRIPQ6WCQ1 1025 aa27.04■■□□□ 1.92
SFXN1-203ENST00000502393 PNPLA7Q6ZV29 1317 aa27.03■■□□□ 1.92
SFXN1-203ENST00000502393 KNSTRNQ9Y448 316 aa27.03■■□□□ 1.92
SFXN1-203ENST00000502393 MORC1Q86VD1 984 aa27.02■■□□□ 1.92
SFXN1-203ENST00000502393 PLEKHG2Q9H7P9 1386 aa27.01■■□□□ 1.91
SFXN1-203ENST00000502393 ARXQ96QS3 562 aa27.01■■□□□ 1.91
SFXN1-203ENST00000502393 FHDC1Q9C0D6 1143 aaPredicted RBP27.01■■□□□ 1.91
SFXN1-203ENST00000502393 SYT17Q9BSW7 474 aa27■■□□□ 1.91
SFXN1-203ENST00000502393 TOGARAM1Q9Y4F4 1720 aa26.99■■□□□ 1.91
SFXN1-203ENST00000502393 PALLDQ8WX93 1383 aa26.99■■□□□ 1.91
SFXN1-203ENST00000502393 SMARCC1Q92922 1105 aaPredicted RBP26.99■■□□□ 1.91
SFXN1-203ENST00000502393 IGSF1Q8N6C5 1336 aa26.98■■□□□ 1.91
SFXN1-203ENST00000502393 IFNL2Q8IZJ0 200 aa26.98■■□□□ 1.91
SFXN1-203ENST00000502393 KIF7Q2M1P5 1343 aa26.97■■□□□ 1.91
SFXN1-203ENST00000502393 PIGBQ92521 554 aa26.97■■□□□ 1.91
SFXN1-203ENST00000502393 ITGB4P16144 1822 aa26.96■■□□□ 1.91
SFXN1-203ENST00000502393 TUBGCP6Q96RT7 1819 aa26.96■■□□□ 1.91
SFXN1-203ENST00000502393 PHKG2P15735 406 aa26.96■■□□□ 1.91
SFXN1-203ENST00000502393 POLD1P28340 1107 aa26.95■■□□□ 1.9
SFXN1-203ENST00000502393 MAP3K5Q99683 1374 aa26.95■■□□□ 1.9
SFXN1-203ENST00000502393 C5P01031 1676 aa26.93■■□□□ 1.9
SFXN1-203ENST00000502393 AMER1Q5JTC6 1135 aaPredicted RBP26.93■■□□□ 1.9
SFXN1-203ENST00000502393 YY1P25490 414 aa26.92■■□□□ 1.9
SFXN1-203ENST00000502393 TMOD3Q9NYL9 352 aa26.92■■□□□ 1.9
SFXN1-203ENST00000502393 COL24A1Q17RW2 1714 aa26.92■■□□□ 1.9
SFXN1-203ENST00000502393 COL23A1Q86Y22 540 aaPredicted RBP26.91■■□□□ 1.9
SFXN1-203ENST00000502393 MSH5O43196 834 aa26.9■■□□□ 1.9
SFXN1-203ENST00000502393 PLEKHO1Q53GL0 409 aaPredicted RBP26.89■■□□□ 1.9
SFXN1-203ENST00000502393 FLAD1Q8NFF5 587 aa26.89■■□□□ 1.9
SFXN1-203ENST00000502393 HSP90AB1P08238 724 aaKnown RBP26.88■■□□□ 1.89
SFXN1-203ENST00000502393 AMOTQ4VCS5 1084 aa26.88■■□□□ 1.89
SFXN1-203ENST00000502393 UTRNP46939 3433 aa26.88■■□□□ 1.89
SFXN1-203ENST00000502393 TAF1LQ8IZX4 1826 aa26.88■■□□□ 1.89
SFXN1-203ENST00000502393 LOC102724428A0A0B4J2F2 783 aa26.86■■□□□ 1.89
SFXN1-203ENST00000502393 PER1O15534 1290 aaPredicted RBP26.86■■□□□ 1.89
SFXN1-203ENST00000502393 SIK1P57059 783 aa26.86■■□□□ 1.89
SFXN1-203ENST00000502393 DCAF5Q96JK2 942 aa26.86■■□□□ 1.89
SFXN1-203ENST00000502393 ASAP1Q9ULH1 1129 aa26.86■■□□□ 1.89
SFXN1-203ENST00000502393 ERVV-2B6SEH9 535 aa26.85■■□□□ 1.89
SFXN1-203ENST00000502393 AK7Q96M32 723 aa26.85■■□□□ 1.89
SFXN1-203ENST00000502393 C4BP0C0L5 1744 aa26.85■■□□□ 1.89
SFXN1-203ENST00000502393 IL13P35225 146 aa26.84■■□□□ 1.89
SFXN1-203ENST00000502393 AEBP1Q8IUX7 1158 aa26.83■■□□□ 1.89
SFXN1-203ENST00000502393 SULT6B1Q6IMI4 303 aa26.82■■□□□ 1.88
SFXN1-203ENST00000502393 ZNF530Q6P9A1 599 aaPredicted RBP26.82■■□□□ 1.88
SFXN1-203ENST00000502393 ATG3Q9NT62 314 aa26.82■■□□□ 1.88
SFXN1-203ENST00000502393 KDRP35968 1356 aa26.82■■□□□ 1.88
SFXN1-203ENST00000502393 KLHL34Q8N239 644 aa26.81■■□□□ 1.88
SFXN1-203ENST00000502393 MTHFSP49914 203 aa26.8■■□□□ 1.88
SFXN1-203ENST00000502393 ATP6V1AP38606 617 aa26.79■■□□□ 1.88
SFXN1-203ENST00000502393 LINC00116Q8NCU8 138 aa26.79■■□□□ 1.88
SFXN1-203ENST00000502393 C1orf141Q5JVX7 400 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms