RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 CTNNBL1Q8WYA6 563 aaPredicted RBP5.58□□□□□ -1.52
NEAT1-202ENST00000501122 PRM3Q9NNZ6 103 aa5.58□□□□□ -1.52
NEAT1-202ENST00000501122 LIMCH1Q9UPQ0 1083 aa5.58□□□□□ -1.52
NEAT1-202ENST00000501122 GMNNO75496 209 aa5.58□□□□□ -1.52
NEAT1-202ENST00000501122 FAM177A1Q8N128 213 aaPredicted RBP5.58□□□□□ -1.52
NEAT1-202ENST00000501122 DHX16O60231 1041 aaKnown RBP5.58□□□□□ -1.52
NEAT1-202ENST00000501122 SPECC1LQ69YQ0 1117 aa5.58□□□□□ -1.52
NEAT1-202ENST00000501122 RNF8O76064 485 aa5.58□□□□□ -1.52
NEAT1-202ENST00000501122 PEX19P40855 299 aa5.58□□□□□ -1.52
NEAT1-202ENST00000501122 NEDD9Q14511 834 aa5.58□□□□□ -1.52
NEAT1-202ENST00000501122 LCA5Q86VQ0 697 aa5.58□□□□□ -1.52
NEAT1-202ENST00000501122 MKL2Q9ULH7 1088 aa5.58□□□□□ -1.52
NEAT1-202ENST00000501122 TSPYL2Q9H2G4 693 aaPredicted RBP5.58□□□□□ -1.52
NEAT1-202ENST00000501122 CREB3O43889 395 aa5.58□□□□□ -1.52
NEAT1-202ENST00000501122 TUBB4AP04350 444 aa5.58□□□□□ -1.52
NEAT1-202ENST00000501122 SKILP12757 684 aa5.58□□□□□ -1.52
NEAT1-202ENST00000501122 UVSSAQ2YD98 709 aa5.58□□□□□ -1.52
NEAT1-202ENST00000501122 CCDC158Q5M9N0 1113 aa5.57□□□□□ -1.52
NEAT1-202ENST00000501122 NBPF11Q86T75 865 aa5.57□□□□□ -1.52
NEAT1-202ENST00000501122 ARHGAP25P42331 645 aa5.57□□□□□ -1.52
NEAT1-202ENST00000501122 GOLGA5Q8TBA6 731 aa5.57□□□□□ -1.52
NEAT1-202ENST00000501122 PDE1CQ14123 709 aaPredicted RBP5.57□□□□□ -1.52
NEAT1-202ENST00000501122 CCDC6Q16204 474 aa5.57□□□□□ -1.52
NEAT1-202ENST00000501122 CTAGE6Q86UF2 777 aa5.57□□□□□ -1.52
NEAT1-202ENST00000501122 GBP7Q8N8V2 638 aaPredicted RBP5.57□□□□□ -1.52
NEAT1-202ENST00000501122 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.57□□□□□ -1.52
NEAT1-202ENST00000501122 ANKS4BQ8N8V4 417 aa5.57□□□□□ -1.52
NEAT1-202ENST00000501122 KIF5CO60282 957 aa5.57□□□□□ -1.52
NEAT1-202ENST00000501122 CSB-PGBD3P0DP91 1061 aa5.57□□□□□ -1.52
NEAT1-202ENST00000501122 SMC1AQ14683 1233 aaKnown RBP5.57□□□□□ -1.52
NEAT1-202ENST00000501122 C16orf45Q96MC5 204 aaPredicted RBP5.57□□□□□ -1.52
NEAT1-202ENST00000501122 ZSCAN12O43309 604 aa5.57□□□□□ -1.52
NEAT1-202ENST00000501122 KCTD17Q8N5Z5 321 aa5.57□□□□□ -1.52
NEAT1-202ENST00000501122 TBC1D31Q96DN5 1066 aa5.57□□□□□ -1.52
NEAT1-202ENST00000501122 SAAL1Q96ER3 474 aa5.57□□□□□ -1.52
NEAT1-202ENST00000501122 UTP6Q9NYH9 597 aaKnown RBP5.57□□□□□ -1.52
NEAT1-202ENST00000501122 TPX2Q9ULW0 747 aaKnown RBP5.57□□□□□ -1.52
NEAT1-202ENST00000501122 PPP1R12BO60237 982 aaPredicted RBP5.57□□□□□ -1.52
NEAT1-202ENST00000501122 OLFM4Q6UX06 510 aa5.57□□□□□ -1.52
NEAT1-202ENST00000501122 ITPRIPQ8IWB1 547 aa5.57□□□□□ -1.52
NEAT1-202ENST00000501122 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.57□□□□□ -1.52
NEAT1-202ENST00000501122 MIER3Q7Z3K6 550 aa5.57□□□□□ -1.52
NEAT1-202ENST00000501122 TMEM51Q9NW97 253 aa5.57□□□□□ -1.52
NEAT1-202ENST00000501122 VPS18Q9P253 973 aa5.57□□□□□ -1.52
NEAT1-202ENST00000501122 KTN1Q86UP2 1357 aaKnown RBP5.57□□□□□ -1.52
NEAT1-202ENST00000501122 FAM177BA6PVY3 158 aa5.57□□□□□ -1.52
NEAT1-202ENST00000501122 DESP17661 470 aa5.57□□□□□ -1.52
NEAT1-202ENST00000501122 NFXL1Q6ZNB6 911 aa5.57□□□□□ -1.52
NEAT1-202ENST00000501122 JPH2Q9BR39 696 aaPredicted RBP5.57□□□□□ -1.52
NEAT1-202ENST00000501122 CCDC40Q4G0X9 1142 aa5.57□□□□□ -1.52
NEAT1-202ENST00000501122 TPD52L2O43399 206 aaKnown RBP5.57□□□□□ -1.52
NEAT1-202ENST00000501122 PSMC4P43686 418 aa5.57□□□□□ -1.52
NEAT1-202ENST00000501122 SH3BP5O60239 455 aa5.56□□□□□ -1.52
NEAT1-202ENST00000501122 TRMT1Q9NXH9 659 aaKnown RBP5.56□□□□□ -1.52
NEAT1-202ENST00000501122 PAIP2BQ9ULR5 123 aaKnown RBP5.56□□□□□ -1.52
NEAT1-202ENST00000501122 PDCD2Q16342 344 aaPredicted RBP5.56□□□□□ -1.52
NEAT1-202ENST00000501122 DDX46Q7L014 1031 aaKnown RBP5.56□□□□□ -1.52
NEAT1-202ENST00000501122 ATRIPQ8WXE1 791 aa5.56□□□□□ -1.52
NEAT1-202ENST00000501122 TRIM6Q9C030 488 aaPredicted RBP5.56□□□□□ -1.52
NEAT1-202ENST00000501122 CHGAP10645 457 aaKnown RBP5.56□□□□□ -1.52
NEAT1-202ENST00000501122 CCDC73Q6ZRK6 1079 aa5.56□□□□□ -1.52
NEAT1-202ENST00000501122 GTF3C6Q969F1 213 aa5.56□□□□□ -1.52
NEAT1-202ENST00000501122 SYCE3A1L190 88 aa5.56□□□□□ -1.52
NEAT1-202ENST00000501122 PPFIA3O75145 1194 aa5.56□□□□□ -1.52
NEAT1-202ENST00000501122 ARHGAP29Q52LW3 1261 aa5.56□□□□□ -1.52
NEAT1-202ENST00000501122 HYPKQ9NX55 129 aa5.56□□□□□ -1.52
NEAT1-202ENST00000501122 CCDC27Q2M243 656 aa5.56□□□□□ -1.52
NEAT1-202ENST00000501122 SLC24A3Q9HC58 644 aa5.56□□□□□ -1.52
NEAT1-202ENST00000501122 TUBBP07437 444 aa5.56□□□□□ -1.52
NEAT1-202ENST00000501122 PPFIBP1Q86W92 1011 aa5.56□□□□□ -1.52
NEAT1-202ENST00000501122 SLC8A1P32418 973 aa5.56□□□□□ -1.52
NEAT1-202ENST00000501122 CCDC83Q8IWF9 413 aa5.56□□□□□ -1.52
NEAT1-202ENST00000501122 SMARCE1Q969G3 411 aa5.56□□□□□ -1.52
NEAT1-202ENST00000501122 LUC7L3O95232 432 aaKnown RBP5.56□□□□□ -1.52
NEAT1-202ENST00000501122 HDXQ7Z353 690 aa5.56□□□□□ -1.52
NEAT1-202ENST00000501122 ZFXP17010 805 aaPredicted RBP5.56□□□□□ -1.52
NEAT1-202ENST00000501122 CCDC148Q8NFR7 591 aa5.56□□□□□ -1.52
NEAT1-202ENST00000501122 TACC1O75410 805 aa5.56□□□□□ -1.52
NEAT1-202ENST00000501122 FAM43BQ6ZT52 329 aaPredicted RBP5.56□□□□□ -1.52
NEAT1-202ENST00000501122 CTAGE5O15320 804 aa5.56□□□□□ -1.52
NEAT1-202ENST00000501122 BLVRAP53004 296 aa5.56□□□□□ -1.52
NEAT1-202ENST00000501122 PCMTD1Q96MG8 357 aaPredicted RBP5.56□□□□□ -1.52
NEAT1-202ENST00000501122 SPAG9O60271 1321 aaKnown RBP5.56□□□□□ -1.52
NEAT1-202ENST00000501122 FOXD1Q16676 465 aa5.56□□□□□ -1.52
NEAT1-202ENST00000501122 MAGEA9P43362 315 aa5.56□□□□□ -1.52
NEAT1-202ENST00000501122 SART3Q15020 963 aaKnown RBP5.56□□□□□ -1.52
NEAT1-202ENST00000501122 CCDC152Q4G0S7 254 aa5.56□□□□□ -1.52
NEAT1-202ENST00000501122 TTC14Q96N46 770 aa5.56□□□□□ -1.52
NEAT1-202ENST00000501122 ERC2O15083 957 aa5.56□□□□□ -1.52
NEAT1-202ENST00000501122 ATP2C2O75185 946 aa5.56□□□□□ -1.52
NEAT1-202ENST00000501122 MMS22LQ6ZRQ5 1243 aa5.56□□□□□ -1.52
NEAT1-202ENST00000501122 SMC3Q9UQE7 1217 aa5.56□□□□□ -1.52
NEAT1-202ENST00000501122 RWDD2BP57060 319 aa5.55□□□□□ -1.52
NEAT1-202ENST00000501122 MORC4Q8TE76 937 aa5.55□□□□□ -1.52
NEAT1-202ENST00000501122 DYTNA2CJ06 578 aa5.55□□□□□ -1.52
NEAT1-202ENST00000501122 SMTNL1A8MU46 457 aa5.55□□□□□ -1.52
NEAT1-202ENST00000501122 KDM4AO75164 1064 aa5.55□□□□□ -1.52
NEAT1-202ENST00000501122 N4BP2L2Q92802 583 aaPredicted RBP5.55□□□□□ -1.52
NEAT1-202ENST00000501122 LRRD1A4D1F6 860 aa5.55□□□□□ -1.52
NEAT1-202ENST00000501122 OPA1O60313 960 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms