RNA–Protein interactions for RNA: ENST00000498367.1

PDCD4-211, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 975 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-211ENST00000498367 HOXA2O43364 376 aa9.35□□□□□ -0.91
PDCD4-211ENST00000498367 S1PR4O95977 384 aa9.35□□□□□ -0.91
PDCD4-211ENST00000498367 GIGYF2Q6Y7W6 1299 aaKnown RBP9.35□□□□□ -0.91
PDCD4-211ENST00000498367 ARMC5Q96C12 935 aa9.35□□□□□ -0.91
PDCD4-211ENST00000498367 TMEM88BA6NKF7 163 aa9.34□□□□□ -0.91
PDCD4-211ENST00000498367 ADH1BP00325 375 aa9.34□□□□□ -0.91
PDCD4-211ENST00000498367 OATP04181 439 aa9.34□□□□□ -0.91
PDCD4-211ENST00000498367 HIC1Q14526 733 aa9.34□□□□□ -0.91
PDCD4-211ENST00000498367 SPRYD7Q5W111 196 aa9.34□□□□□ -0.91
PDCD4-211ENST00000498367 METTL3Q86U44 580 aaKnown RBP9.34□□□□□ -0.91
PDCD4-211ENST00000498367 GDPD2Q9HCC8 539 aa9.34□□□□□ -0.91
PDCD4-211ENST00000498367 GPR37O15354 613 aa9.33□□□□□ -0.92
PDCD4-211ENST00000498367 ATG7O95352 703 aa9.33□□□□□ -0.92
PDCD4-211ENST00000498367 NBPF1Q3BBV0 1214 aa9.33□□□□□ -0.92
PDCD4-211ENST00000498367 CFAP70Q5T0N1 1121 aa9.33□□□□□ -0.92
PDCD4-211ENST00000498367 ZNF787Q6DD87 383 aa9.33□□□□□ -0.92
PDCD4-211ENST00000498367 NAP1L4Q99733 375 aaKnown RBP9.33□□□□□ -0.92
PDCD4-211ENST00000498367 GEMIN8Q9NWZ8 242 aaKnown RBP9.33□□□□□ -0.92
PDCD4-211ENST00000498367 FBXO9Q9UK97 447 aaPredicted RBP9.33□□□□□ -0.92
PDCD4-211ENST00000498367 PPEF1O14829 653 aaPredicted RBP9.32□□□□□ -0.92
PDCD4-211ENST00000498367 ATP2B1P20020 1258 aa9.32□□□□□ -0.92
PDCD4-211ENST00000498367 PRR20EP86478 221 aa9.32□□□□□ -0.92
PDCD4-211ENST00000498367 PRR20CP86479 221 aa9.32□□□□□ -0.92
PDCD4-211ENST00000498367 PRR20DP86480 221 aa9.32□□□□□ -0.92
PDCD4-211ENST00000498367 PRR20BP86481 221 aa9.32□□□□□ -0.92
PDCD4-211ENST00000498367 PRR20AP86496 221 aa9.32□□□□□ -0.92
PDCD4-211ENST00000498367 SETDB1Q15047 1291 aa9.32□□□□□ -0.92
PDCD4-211ENST00000498367 TMEM259Q4ZIN3 620 aa9.32□□□□□ -0.92
PDCD4-211ENST00000498367 LIAT1Q6ZQX7 453 aa9.32□□□□□ -0.92
PDCD4-211ENST00000498367 ZNF598Q86UK7 904 aaKnown RBP9.32□□□□□ -0.92
PDCD4-211ENST00000498367 FRMD4BQ9Y2L6 1034 aa9.32□□□□□ -0.92
PDCD4-211ENST00000498367 TBX22Q9Y458 520 aa9.32□□□□□ -0.92
PDCD4-211ENST00000498367 GOLIM4O00461 696 aa9.31□□□□□ -0.92
PDCD4-211ENST00000498367 EPB41L2O43491 1005 aaKnown RBP9.31□□□□□ -0.92
PDCD4-211ENST00000498367 ZNF500O60304 480 aaPredicted RBP9.31□□□□□ -0.92
PDCD4-211ENST00000498367 NR1I2O75469 434 aa9.31□□□□□ -0.92
PDCD4-211ENST00000498367 RECKO95980 971 aa9.31□□□□□ -0.92
PDCD4-211ENST00000498367 MS4A1P11836 297 aa9.31□□□□□ -0.92
PDCD4-211ENST00000498367 ABL2P42684 1182 aa9.31□□□□□ -0.92
PDCD4-211ENST00000498367 CCDC144BQ3MJ40 725 aa9.31□□□□□ -0.92
PDCD4-211ENST00000498367 C11orf96Q7Z7L8 435 aa9.31□□□□□ -0.92
PDCD4-211ENST00000498367 RPS6KC1Q96S38 1066 aa9.31□□□□□ -0.92
PDCD4-211ENST00000498367 SNRKQ9NRH2 765 aa9.31□□□□□ -0.92
PDCD4-211ENST00000498367 GABBR1Q9UBS5 961 aa9.31□□□□□ -0.92
PDCD4-211ENST00000498367 STK10O94804 968 aaKnown RBP9.3□□□□□ -0.92
PDCD4-211ENST00000498367 RHBDL3P58872 404 aa9.3□□□□□ -0.92
PDCD4-211ENST00000498367 SOGA3Q5TF21 947 aa9.3□□□□□ -0.92
PDCD4-211ENST00000498367 PCGF5Q86SE9 256 aa9.3□□□□□ -0.92
PDCD4-211ENST00000498367 TRIM44Q96DX7 344 aaPredicted RBP9.3□□□□□ -0.92
PDCD4-211ENST00000498367 POM121CA8CG34 1229 aa9.29□□□□□ -0.92
PDCD4-211ENST00000498367 S100BP04271 92 aaPredicted RBP9.29□□□□□ -0.92
PDCD4-211ENST00000498367 FECHP22830 423 aa9.29□□□□□ -0.92
PDCD4-211ENST00000498367 BDNFP23560 247 aa9.29□□□□□ -0.92
PDCD4-211ENST00000498367 GYS2P54840 703 aa9.29□□□□□ -0.92
PDCD4-211ENST00000498367 POU5F1Q01860 360 aaKnown RBP9.29□□□□□ -0.92
PDCD4-211ENST00000498367 PLA2G2CQ5R387 149 aa9.29□□□□□ -0.92
PDCD4-211ENST00000498367 SCUBE3Q8IX30 993 aa9.29□□□□□ -0.92
PDCD4-211ENST00000498367 NLRP2Q9NX02 1062 aa9.29□□□□□ -0.92
PDCD4-211ENST00000498367 FEZ2Q9UHY8 353 aaPredicted RBP9.29□□□□□ -0.92
PDCD4-211ENST00000498367 PRC1O43663 620 aa9.28□□□□□ -0.92
PDCD4-211ENST00000498367 HSD3B2P26439 372 aa9.28□□□□□ -0.92
PDCD4-211ENST00000498367 HDAC1Q13547 482 aaPredicted RBP9.28□□□□□ -0.92
PDCD4-211ENST00000498367 TSNAXIP1Q2TAA8 658 aa9.28□□□□□ -0.92
PDCD4-211ENST00000498367 HDGFL1Q5TGJ6 251 aa9.28□□□□□ -0.92
PDCD4-211ENST00000498367 CEP120Q8N960 986 aa9.28□□□□□ -0.92
PDCD4-211ENST00000498367 PIK3R5Q8WYR1 880 aa9.28□□□□□ -0.92
PDCD4-211ENST00000498367 ANP32BQ92688 251 aaKnown RBP9.28□□□□□ -0.92
PDCD4-211ENST00000498367 PPP1R12CQ9BZL4 782 aa9.28□□□□□ -0.92
PDCD4-211ENST00000498367 SLC6A16Q9GZN6 736 aa9.28□□□□□ -0.92
PDCD4-211ENST00000498367 IRF2BPLQ9H1B7 796 aa9.28□□□□□ -0.92
PDCD4-211ENST00000498367 TMX4Q9H1E5 349 aaPredicted RBP9.28□□□□□ -0.92
PDCD4-211ENST00000498367 COL4A3BPQ9Y5P4 624 aa9.28□□□□□ -0.92
PDCD4-211ENST00000498367 ANKRD33BA6NCL7 494 aa9.27□□□□□ -0.93
PDCD4-211ENST00000498367 SOCS7O14512 581 aa9.27□□□□□ -0.93
PDCD4-211ENST00000498367 GNPATO15228 680 aa9.27□□□□□ -0.93
PDCD4-211ENST00000498367 GDF9O60383 454 aa9.27□□□□□ -0.93
PDCD4-211ENST00000498367 MAN1A1P33908 653 aa9.27□□□□□ -0.93
PDCD4-211ENST00000498367 HELBQ8NG08 1087 aaPredicted RBP9.27□□□□□ -0.93
PDCD4-211ENST00000498367 TSPAN18Q96SJ8 248 aa9.27□□□□□ -0.93
PDCD4-211ENST00000498367 SPC25Q9HBM1 224 aa9.27□□□□□ -0.93
PDCD4-211ENST00000498367 PRKAG2Q9UGJ0 569 aa9.27□□□□□ -0.93
PDCD4-211ENST00000498367 SCAMP3O14828 347 aaKnown RBP9.26□□□□□ -0.93
PDCD4-211ENST00000498367 SSFA2P28290 1259 aa9.26□□□□□ -0.93
PDCD4-211ENST00000498367 TBX4P57082 545 aa9.26□□□□□ -0.93
PDCD4-211ENST00000498367 CCDC96Q2M329 555 aa9.26□□□□□ -0.93
PDCD4-211ENST00000498367 PLEKHG6Q3KR16 790 aa9.26□□□□□ -0.93
PDCD4-211ENST00000498367 ZNF697Q5TEC3 545 aa9.26□□□□□ -0.93
PDCD4-211ENST00000498367 SNRNP27Q8WVK2 155 aaKnown RBP9.26□□□□□ -0.93
PDCD4-211ENST00000498367 ARHGEF10LQ9HCE6 1279 aa9.26□□□□□ -0.93
PDCD4-211ENST00000498367 DGAT1O75907 488 aa9.25□□□□□ -0.93
PDCD4-211ENST00000498367 GTF2F1P35269 517 aaKnown RBP eCLIP9.25□□□□□ -0.93
PDCD4-211ENST00000498367 SAFB2Q14151 953 aaKnown RBP eCLIP9.25□□□□□ -0.93
PDCD4-211ENST00000498367 CSPP1Q1MSJ5 1256 aa9.25□□□□□ -0.93
PDCD4-211ENST00000498367 PUS10Q3MIT2 529 aaKnown RBP9.25□□□□□ -0.93
PDCD4-211ENST00000498367 SLC43A3Q8NBI5 491 aa9.25□□□□□ -0.93
PDCD4-211ENST00000498367 PROCA1Q8NCQ7 364 aaPredicted RBP9.25□□□□□ -0.93
PDCD4-211ENST00000498367 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.25□□□□□ -0.93
PDCD4-211ENST00000498367 TCEAL9Q9UHQ7 104 aa9.25□□□□□ -0.93
PDCD4-211ENST00000498367 CCDC189A1A4V9 331 aa9.24□□□□□ -0.93
PDCD4-211ENST00000498367 NBPF20Q3BBV1 942 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms