RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 PRIM1P49642 420 aaKnown RBP25.91■■□□□ 1.74
PRKCB-209ENST00000498058 KCNQ4P56696 695 aa25.91■■□□□ 1.74
PRKCB-209ENST00000498058 ZCRB1Q8TBF4 217 aaKnown RBP25.91■■□□□ 1.74
PRKCB-209ENST00000498058 HSP90AB2PQ58FF8 381 aa25.9■■□□□ 1.74
PRKCB-209ENST00000498058 MTFR1LQ9H019 292 aa25.9■■□□□ 1.74
PRKCB-209ENST00000498058 AKT1S1Q96B36 256 aa25.89■■□□□ 1.74
PRKCB-209ENST00000498058 TUBGCP6Q96RT7 1819 aa25.88■■□□□ 1.73
PRKCB-209ENST00000498058 LY75O60449 1722 aa25.88■■□□□ 1.73
PRKCB-209ENST00000498058 YY1P25490 414 aa25.87■■□□□ 1.73
PRKCB-209ENST00000498058 SYTL4Q96C24 671 aaPredicted RBP25.87■■□□□ 1.73
PRKCB-209ENST00000498058 FHDC1Q9C0D6 1143 aaPredicted RBP25.86■■□□□ 1.73
PRKCB-209ENST00000498058 NSD3Q9BZ95 1437 aa25.86■■□□□ 1.73
PRKCB-209ENST00000498058 INSRP06213 1382 aa25.85■■□□□ 1.73
PRKCB-209ENST00000498058 CDCA8Q53HL2 280 aa25.85■■□□□ 1.73
PRKCB-209ENST00000498058 QSER1Q2KHR3 1735 aa25.84■■□□□ 1.73
PRKCB-209ENST00000498058 SYT17Q9BSW7 474 aa25.84■■□□□ 1.73
PRKCB-209ENST00000498058 EMILIN1Q9Y6C2 1016 aa25.84■■□□□ 1.73
PRKCB-209ENST00000498058 SLC27A3Q5K4L6 730 aa25.83■■□□□ 1.73
PRKCB-209ENST00000498058 FLT4P35916 1363 aa25.82■■□□□ 1.72
PRKCB-209ENST00000498058 TIMELESSQ9UNS1 1208 aa25.82■■□□□ 1.72
PRKCB-209ENST00000498058 PNPLA7Q6ZV29 1317 aa25.82■■□□□ 1.72
PRKCB-209ENST00000498058 SMG6Q86US8 1419 aaKnown RBP25.8■■□□□ 1.72
PRKCB-209ENST00000498058 RAPGEF4Q8WZA2 1011 aa25.8■■□□□ 1.72
PRKCB-209ENST00000498058 COL24A1Q17RW2 1714 aa25.8■■□□□ 1.72
PRKCB-209ENST00000498058 ARXQ96QS3 562 aa25.79■■□□□ 1.72
PRKCB-209ENST00000498058 CGNL1Q0VF96 1302 aa25.79■■□□□ 1.72
PRKCB-209ENST00000498058 KIF24Q5T7B8 1368 aa25.79■■□□□ 1.72
PRKCB-209ENST00000498058 TATP17735 454 aaPredicted RBP25.78■■□□□ 1.72
PRKCB-209ENST00000498058 ANKRD26Q9UPS8 1709 aa25.77■■□□□ 1.72
PRKCB-209ENST00000498058 DCAF8L1A6NGE4 600 aa25.77■■□□□ 1.72
PRKCB-209ENST00000498058 MAP2P11137 1827 aaKnown RBP25.77■■□□□ 1.72
PRKCB-209ENST00000498058 CYP27B1O15528 508 aa25.76■■□□□ 1.71
PRKCB-209ENST00000498058 TOGARAM1Q9Y4F4 1720 aa25.76■■□□□ 1.71
PRKCB-209ENST00000498058 NCAPD2Q15021 1401 aa25.75■■□□□ 1.71
PRKCB-209ENST00000498058 CLSPNQ9HAW4 1339 aa25.75■■□□□ 1.71
PRKCB-209ENST00000498058 TFCP2L1Q9NZI6 479 aa25.74■■□□□ 1.71
PRKCB-209ENST00000498058 CCNL1Q9UK58 526 aaPredicted RBP25.74■■□□□ 1.71
PRKCB-209ENST00000498058 PKD1L3Q7Z443 1732 aa25.74■■□□□ 1.71
PRKCB-209ENST00000498058 ITGB4P16144 1822 aa25.72■■□□□ 1.71
PRKCB-209ENST00000498058 PCDH11XQ9BZA7 1347 aa25.72■■□□□ 1.71
PRKCB-209ENST00000498058 PCDH11YQ9BZA8 1340 aa25.72■■□□□ 1.71
PRKCB-209ENST00000498058 SLC16A10Q8TF71 515 aa25.72■■□□□ 1.71
PRKCB-209ENST00000498058 MAP3K5Q99683 1374 aa25.71■■□□□ 1.71
PRKCB-209ENST00000498058 PPM1GO15355 546 aaPredicted RBP25.71■■□□□ 1.71
PRKCB-209ENST00000498058 WASHC2AQ641Q2 1341 aa25.7■■□□□ 1.71
PRKCB-209ENST00000498058 POLR3GLQ9BT43 218 aa25.7■■□□□ 1.7
PRKCB-209ENST00000498058 UTRNP46939 3433 aa25.7■■□□□ 1.7
PRKCB-209ENST00000498058 EYA1Q99502 592 aa25.69■■□□□ 1.7
PRKCB-209ENST00000498058 POLKQ9UBT6 870 aa25.69■■□□□ 1.7
PRKCB-209ENST00000498058 TAF1LQ8IZX4 1826 aa25.69■■□□□ 1.7
PRKCB-209ENST00000498058 C5P01031 1676 aa25.68■■□□□ 1.7
PRKCB-209ENST00000498058 COL23A1Q86Y22 540 aaPredicted RBP25.68■■□□□ 1.7
PRKCB-209ENST00000498058 MPRIPQ6WCQ1 1025 aa25.67■■□□□ 1.7
PRKCB-209ENST00000498058 HSPA5P11021 654 aaKnown RBP25.66■■□□□ 1.7
PRKCB-209ENST00000498058 PALLDQ8WX93 1383 aa25.65■■□□□ 1.7
PRKCB-209ENST00000498058 CHD4Q14839 1912 aa25.65■■□□□ 1.7
PRKCB-209ENST00000498058 POLD1P28340 1107 aa25.63■■□□□ 1.69
PRKCB-209ENST00000498058 TNNT2P45379 298 aaPredicted RBP25.63■■□□□ 1.69
PRKCB-209ENST00000498058 NKX1-1Q15270 411 aaPredicted RBP25.63■■□□□ 1.69
PRKCB-209ENST00000498058 KLHL34Q8N239 644 aa25.63■■□□□ 1.69
PRKCB-209ENST00000498058 AMIGO3Q86WK7 504 aa25.62■■□□□ 1.69
PRKCB-209ENST00000498058 NLGN2Q8NFZ4 835 aa25.62■■□□□ 1.69
PRKCB-209ENST00000498058 PIGBQ92521 554 aa25.62■■□□□ 1.69
PRKCB-209ENST00000498058 EIF4A2Q14240 407 aaKnown RBP25.61■■□□□ 1.69
PRKCB-209ENST00000498058 MSH5O43196 834 aa25.6■■□□□ 1.69
PRKCB-209ENST00000498058 EIF4G2P78344 907 aaKnown RBP eCLIP25.6■■□□□ 1.694e-7■■■■□ 20.3
PRKCB-209ENST00000498058 PANK3Q9H999 370 aa25.6■■□□□ 1.69
PRKCB-209ENST00000498058 MSL1Q68DK7 614 aa25.59■■□□□ 1.69
PRKCB-209ENST00000498058 SMIM5Q71RC9 77 aa25.59■■□□□ 1.69
PRKCB-209ENST00000498058 ZNF784Q8NCA9 323 aaPredicted RBP25.59■■□□□ 1.69
PRKCB-209ENST00000498058 SPG7Q9UQ90 795 aa25.59■■□□□ 1.69
PRKCB-209ENST00000498058 C4BP0C0L5 1744 aa25.59■■□□□ 1.69
PRKCB-209ENST00000498058 UBR3Q6ZT12 1888 aa25.56■■□□□ 1.68
PRKCB-209ENST00000498058 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.56■■□□□ 1.68
PRKCB-209ENST00000498058 PHKG2P15735 406 aa25.55■■□□□ 1.68
PRKCB-209ENST00000498058 GPR162Q16538 588 aa25.55■■□□□ 1.68
PRKCB-209ENST00000498058 SMARCC1Q92922 1105 aaPredicted RBP25.55■■□□□ 1.68
PRKCB-209ENST00000498058 ASAP1Q9ULH1 1129 aa25.53■■□□□ 1.68
PRKCB-209ENST00000498058 IFNL2Q8IZJ0 200 aa25.52■■□□□ 1.68
PRKCB-209ENST00000498058 LINC00116Q8NCU8 138 aa25.52■■□□□ 1.68
PRKCB-209ENST00000498058 IGSF1Q8N6C5 1336 aa25.52■■□□□ 1.68
PRKCB-209ENST00000498058 GOLGB1Q14789 3259 aaKnown RBP25.52■■□□□ 1.68
PRKCB-209ENST00000498058 PELP1Q8IZL8 1130 aaKnown RBP25.51■■□□□ 1.67
PRKCB-209ENST00000498058 CCER1Q8TC90 406 aaPredicted RBP25.51■■□□□ 1.67
PRKCB-209ENST00000498058 LOC102724428A0A0B4J2F2 783 aa25.5■■□□□ 1.67
PRKCB-209ENST00000498058 SIK1P57059 783 aa25.5■■□□□ 1.67
PRKCB-209ENST00000498058 ITPK1Q13572 414 aa25.5■■□□□ 1.67
PRKCB-209ENST00000498058 YBX3P16989 372 aaKnown RBP eCLIP25.49■■□□□ 1.672e-17■■■□□ 16
PRKCB-209ENST00000498058 AK7Q96M32 723 aa25.49■■□□□ 1.67
PRKCB-209ENST00000498058 TMOD3Q9NYL9 352 aa25.49■■□□□ 1.67
PRKCB-209ENST00000498058 FLAD1Q8NFF5 587 aa25.48■■□□□ 1.67
PRKCB-209ENST00000498058 ATG3Q9NT62 314 aa25.48■■□□□ 1.67
PRKCB-209ENST00000498058 PHF14O94880 888 aa25.47■■□□□ 1.67
PRKCB-209ENST00000498058 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.46■■□□□ 1.67
PRKCB-209ENST00000498058 AEBP1Q8IUX7 1158 aa25.45■■□□□ 1.66
PRKCB-209ENST00000498058 SLC4A9Q96Q91 983 aa25.45■■□□□ 1.66
PRKCB-209ENST00000498058 ATP6V1AP38606 617 aa25.43■■□□□ 1.66
PRKCB-209ENST00000498058 MORC1Q86VD1 984 aa25.43■■□□□ 1.66
PRKCB-209ENST00000498058 KDM6AO15550 1401 aaPredicted RBP25.43■■□□□ 1.66
PRKCB-209ENST00000498058 KDRP35968 1356 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms