RNA–Protein interactions for RNA: ENST00000497877.5

ARRDC1-212, Transcript of arrestin domain containing 1, humanhuman

TSL 5

Gene ARRDC1, Length 831 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC1-212ENST00000497877 RGPD2P0DJD1 1756 aa29.08■■■□□ 2.25
ARRDC1-212ENST00000497877 ZCRB1Q8TBF4 217 aaKnown RBP29.07■■■□□ 2.24
ARRDC1-212ENST00000497877 KLHL34Q8N239 644 aa29.06■■■□□ 2.24
ARRDC1-212ENST00000497877 TFCP2L1Q9NZI6 479 aa29.06■■■□□ 2.24
ARRDC1-212ENST00000497877 MEGF6O75095 1541 aa29.05■■■□□ 2.24
ARRDC1-212ENST00000497877 NSD2O96028 1365 aa29.05■■■□□ 2.24
ARRDC1-212ENST00000497877 POLD1P28340 1107 aa29.05■■■□□ 2.24
ARRDC1-212ENST00000497877 SHANK3Q9BYB0 1731 aa29.05■■■□□ 2.24
ARRDC1-212ENST00000497877 TUBGCP6Q96RT7 1819 aa29.04■■■□□ 2.24
ARRDC1-212ENST00000497877 GPR162Q16538 588 aa29.04■■■□□ 2.24
ARRDC1-212ENST00000497877 LY75O60449 1722 aa29.03■■■□□ 2.24
ARRDC1-212ENST00000497877 RTL1A6NKG5 1358 aa29.01■■■□□ 2.24
ARRDC1-212ENST00000497877 COL24A1Q17RW2 1714 aa29.01■■■□□ 2.23
ARRDC1-212ENST00000497877 SLC24A1O60721 1099 aa29.01■■■□□ 2.23
ARRDC1-212ENST00000497877 RRS1Q15050 365 aaKnown RBP29.01■■■□□ 2.23
ARRDC1-212ENST00000497877 NBPF6Q5VWK0 638 aa29■■■□□ 2.23
ARRDC1-212ENST00000497877 NBPF4Q96M43 638 aa29■■■□□ 2.23
ARRDC1-212ENST00000497877 CCNL1Q9UK58 526 aaPredicted RBP28.99■■■□□ 2.23
ARRDC1-212ENST00000497877 USHBP1Q8N6Y0 703 aa28.98■■■□□ 2.23
ARRDC1-212ENST00000497877 FYB1O15117 783 aa28.97■■■□□ 2.23
ARRDC1-212ENST00000497877 PELP1Q8IZL8 1130 aaKnown RBP28.97■■■□□ 2.23
ARRDC1-212ENST00000497877 GGNBP2Q9H3C7 697 aa28.97■■■□□ 2.23
ARRDC1-212ENST00000497877 NLGN2Q8NFZ4 835 aa28.95■■■□□ 2.22
ARRDC1-212ENST00000497877 USP47Q96K76 1375 aa28.95■■■□□ 2.22
ARRDC1-212ENST00000497877 RAPGEF4Q8WZA2 1011 aa28.94■■■□□ 2.22
ARRDC1-212ENST00000497877 SMG6Q86US8 1419 aaKnown RBP28.94■■■□□ 2.22
ARRDC1-212ENST00000497877 CGNL1Q0VF96 1302 aa28.94■■■□□ 2.22
ARRDC1-212ENST00000497877 MSH5O43196 834 aa28.93■■■□□ 2.22
ARRDC1-212ENST00000497877 TMF1P82094 1093 aa28.92■■■□□ 2.22
ARRDC1-212ENST00000497877 TATP17735 454 aaPredicted RBP28.91■■■□□ 2.22
ARRDC1-212ENST00000497877 C1QTNF8P60827 252 aa28.91■■■□□ 2.22
ARRDC1-212ENST00000497877 COL23A1Q86Y22 540 aaPredicted RBP28.91■■■□□ 2.22
ARRDC1-212ENST00000497877 HSP90AB2PQ58FF8 381 aa28.89■■■□□ 2.22
ARRDC1-212ENST00000497877 SENP3-EIF4A1A0A087X0R7 540 aa28.88■■■□□ 2.21
ARRDC1-212ENST00000497877 INSRP06213 1382 aa28.88■■■□□ 2.21
ARRDC1-212ENST00000497877 MSL1Q68DK7 614 aa28.86■■■□□ 2.21
ARRDC1-212ENST00000497877 PCDH11XQ9BZA7 1347 aa28.86■■■□□ 2.21
ARRDC1-212ENST00000497877 PCDH11YQ9BZA8 1340 aa28.86■■■□□ 2.21
ARRDC1-212ENST00000497877 FLT4P35916 1363 aa28.85■■■□□ 2.21
ARRDC1-212ENST00000497877 KIF20BQ96Q89 1820 aa28.85■■■□□ 2.21
ARRDC1-212ENST00000497877 C5P01031 1676 aa28.84■■■□□ 2.21
ARRDC1-212ENST00000497877 YBX3P16989 372 aaKnown RBP eCLIP28.82■■■□□ 2.2
ARRDC1-212ENST00000497877 MPRIPQ6WCQ1 1025 aa28.82■■■□□ 2.2
ARRDC1-212ENST00000497877 PALLDQ8WX93 1383 aa28.82■■■□□ 2.2
ARRDC1-212ENST00000497877 GOLGB1Q14789 3259 aaKnown RBP28.82■■■□□ 2.2
ARRDC1-212ENST00000497877 KIF24Q5T7B8 1368 aa28.81■■■□□ 2.2
ARRDC1-212ENST00000497877 CYP27B1O15528 508 aa28.8■■■□□ 2.2
ARRDC1-212ENST00000497877 GIGYF1O75420 1035 aaPredicted RBP28.8■■■□□ 2.2
ARRDC1-212ENST00000497877 GRIN3BO60391 1043 aa28.79■■■□□ 2.2
ARRDC1-212ENST00000497877 CDCA8Q53HL2 280 aa28.79■■■□□ 2.2
ARRDC1-212ENST00000497877 EMILIN1Q9Y6C2 1016 aa28.78■■■□□ 2.2
ARRDC1-212ENST00000497877 TAF1LQ8IZX4 1826 aa28.78■■■□□ 2.2
ARRDC1-212ENST00000497877 TOGARAM1Q9Y4F4 1720 aa28.77■■■□□ 2.2
ARRDC1-212ENST00000497877 FLAD1Q8NFF5 587 aa28.77■■■□□ 2.2
ARRDC1-212ENST00000497877 HMGB2P26583 209 aaKnown RBP28.76■■■□□ 2.19
ARRDC1-212ENST00000497877 CARD14Q9BXL6 1004 aa28.76■■■□□ 2.19
ARRDC1-212ENST00000497877 ITGB4P16144 1822 aa28.74■■■□□ 2.19
ARRDC1-212ENST00000497877 SMARCC1Q92922 1105 aaPredicted RBP28.74■■■□□ 2.19
ARRDC1-212ENST00000497877 NSD3Q9BZ95 1437 aa28.74■■■□□ 2.19
ARRDC1-212ENST00000497877 PKD1L3Q7Z443 1732 aa28.74■■■□□ 2.19
ARRDC1-212ENST00000497877 C4BP0C0L5 1744 aa28.73■■■□□ 2.19
ARRDC1-212ENST00000497877 CD2APQ9Y5K6 639 aa28.73■■■□□ 2.19
ARRDC1-212ENST00000497877 PPM1GO15355 546 aaPredicted RBP28.72■■■□□ 2.19
ARRDC1-212ENST00000497877 AK7Q96M32 723 aa28.72■■■□□ 2.19
ARRDC1-212ENST00000497877 AMIGO3Q86WK7 504 aa28.71■■■□□ 2.19
ARRDC1-212ENST00000497877 PIGBQ92521 554 aa28.71■■■□□ 2.19
ARRDC1-212ENST00000497877 NCAPD2Q15021 1401 aa28.69■■■□□ 2.18
ARRDC1-212ENST00000497877 PHF14O94880 888 aa28.68■■■□□ 2.18
ARRDC1-212ENST00000497877 NKX1-1Q15270 411 aaPredicted RBP28.68■■■□□ 2.18
ARRDC1-212ENST00000497877 SMIM5Q71RC9 77 aa28.68■■■□□ 2.18
ARRDC1-212ENST00000497877 SPG7Q9UQ90 795 aa28.68■■■□□ 2.18
ARRDC1-212ENST00000497877 ANKRD26Q9UPS8 1709 aa28.66■■■□□ 2.18
ARRDC1-212ENST00000497877 UBR3Q6ZT12 1888 aa28.66■■■□□ 2.18
ARRDC1-212ENST00000497877 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.65■■■□□ 2.18
ARRDC1-212ENST00000497877 ATP10DQ9P241 1426 aa28.65■■■□□ 2.18
ARRDC1-212ENST00000497877 WASHC2AQ641Q2 1341 aa28.65■■■□□ 2.18
ARRDC1-212ENST00000497877 EYA1Q99502 592 aa28.64■■■□□ 2.18
ARRDC1-212ENST00000497877 LOC102724428A0A0B4J2F2 783 aa28.63■■■□□ 2.17
ARRDC1-212ENST00000497877 SIK1P57059 783 aa28.63■■■□□ 2.17
ARRDC1-212ENST00000497877 LINC00116Q8NCU8 138 aa28.63■■■□□ 2.17
ARRDC1-212ENST00000497877 MAP2P11137 1827 aaKnown RBP28.63■■■□□ 2.17
ARRDC1-212ENST00000497877 TMOD3Q9NYL9 352 aa28.62■■■□□ 2.17
ARRDC1-212ENST00000497877 SSFA2P28290 1259 aa28.61■■■□□ 2.17
ARRDC1-212ENST00000497877 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.61■■■□□ 2.17
ARRDC1-212ENST00000497877 ASAP1Q9ULH1 1129 aa28.6■■■□□ 2.17
ARRDC1-212ENST00000497877 WWC3Q9ULE0 1092 aa28.59■■■□□ 2.17
ARRDC1-212ENST00000497877 IGSF1Q8N6C5 1336 aa28.59■■■□□ 2.17
ARRDC1-212ENST00000497877 ITPK1Q13572 414 aa28.58■■■□□ 2.17
ARRDC1-212ENST00000497877 IFNL2Q8IZJ0 200 aa28.58■■■□□ 2.17
ARRDC1-212ENST00000497877 POLKQ9UBT6 870 aa28.58■■■□□ 2.17
ARRDC1-212ENST00000497877 PHKG2P15735 406 aa28.57■■■□□ 2.16
ARRDC1-212ENST00000497877 GNPATO15228 680 aa28.56■■■□□ 2.16
ARRDC1-212ENST00000497877 ATP6V1AP38606 617 aa28.56■■■□□ 2.16
ARRDC1-212ENST00000497877 TRIM26Q12899 539 aaPredicted RBP28.56■■■□□ 2.16
ARRDC1-212ENST00000497877 ADCY9O60503 1353 aa28.55■■■□□ 2.16
ARRDC1-212ENST00000497877 GPBP1L1Q9HC44 474 aaPredicted RBP28.55■■■□□ 2.16
ARRDC1-212ENST00000497877 EIF4A2Q14240 407 aaKnown RBP28.53■■■□□ 2.16
ARRDC1-212ENST00000497877 ZNF526Q8TF50 670 aaPredicted RBP28.53■■■□□ 2.16
ARRDC1-212ENST00000497877 POLR3GLQ9BT43 218 aa28.53■■■□□ 2.16
ARRDC1-212ENST00000497877 ATG3Q9NT62 314 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms