RNA–Protein interactions for RNA: ENST00000497415.1

RPN1-208, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 547 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-208ENST00000497415 NUP188Q5SRE5 1749 aa25.57■■□□□ 1.68
RPN1-208ENST00000497415 ZCRB1Q8TBF4 217 aaKnown RBP25.57■■□□□ 1.68
RPN1-208ENST00000497415 RAPGEF4Q8WZA2 1011 aa25.56■■□□□ 1.68
RPN1-208ENST00000497415 KCNQ2O43526 872 aa25.55■■□□□ 1.68
RPN1-208ENST00000497415 DDX54Q8TDD1 881 aaKnown RBP25.55■■□□□ 1.68
RPN1-208ENST00000497415 TATP17735 454 aaPredicted RBP25.54■■□□□ 1.68
RPN1-208ENST00000497415 KAT6BQ8WYB5 2073 aa25.53■■□□□ 1.68
RPN1-208ENST00000497415 ACSBG1Q96GR2 724 aa25.53■■□□□ 1.68
RPN1-208ENST00000497415 EYA1Q99502 592 aa25.53■■□□□ 1.68
RPN1-208ENST00000497415 EIF4A2Q14240 407 aaKnown RBP25.52■■□□□ 1.68
RPN1-208ENST00000497415 PSDA5PKW4 1024 aaPredicted RBP25.5■■□□□ 1.67
RPN1-208ENST00000497415 BTAF1O14981 1849 aa25.5■■□□□ 1.67
RPN1-208ENST00000497415 PROM2Q8N271 834 aa25.5■■□□□ 1.67
RPN1-208ENST00000497415 NPC1L1Q9UHC9 1359 aa25.49■■□□□ 1.67
RPN1-208ENST00000497415 PKD1L3Q7Z443 1732 aa25.49■■□□□ 1.67
RPN1-208ENST00000497415 R3HDM1Q15032 1099 aaKnown RBP25.47■■□□□ 1.67
RPN1-208ENST00000497415 NBPF14Q5TI25 921 aa25.47■■□□□ 1.67
RPN1-208ENST00000497415 DOT1LQ8TEK3 1739 aa25.46■■□□□ 1.67
RPN1-208ENST00000497415 IGSF1Q8N6C5 1336 aa25.45■■□□□ 1.66
RPN1-208ENST00000497415 PCDH11XQ9BZA7 1347 aa25.45■■□□□ 1.66
RPN1-208ENST00000497415 PCDH11YQ9BZA8 1340 aa25.45■■□□□ 1.66
RPN1-208ENST00000497415 TXNRD1Q16881 649 aa25.44■■□□□ 1.66
RPN1-208ENST00000497415 CC2D1BQ5T0F9 858 aaKnown RBP25.43■■□□□ 1.66
RPN1-208ENST00000497415 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.43■■□□□ 1.66
RPN1-208ENST00000497415 PLEKHG2Q9H7P9 1386 aa25.43■■□□□ 1.66
RPN1-208ENST00000497415 CYP27B1O15528 508 aa25.42■■□□□ 1.66
RPN1-208ENST00000497415 PRIM1P49642 420 aaKnown RBP25.42■■□□□ 1.66
RPN1-208ENST00000497415 SPG7Q9UQ90 795 aa25.4■■□□□ 1.66
RPN1-208ENST00000497415 LRP5O75197 1615 aa25.39■■□□□ 1.66
RPN1-208ENST00000497415 MTHFSP49914 203 aa25.39■■□□□ 1.66
RPN1-208ENST00000497415 IL13P35225 146 aa25.38■■□□□ 1.65
RPN1-208ENST00000497415 NKX1-1Q15270 411 aaPredicted RBP25.38■■□□□ 1.65
RPN1-208ENST00000497415 SYTL4Q96C24 671 aaPredicted RBP25.38■■□□□ 1.65
RPN1-208ENST00000497415 ANO8Q9HCE9 1232 aaPredicted RBP25.38■■□□□ 1.65
RPN1-208ENST00000497415 TOGARAM1Q9Y4F4 1720 aa25.35■■□□□ 1.65
RPN1-208ENST00000497415 LY75O60449 1722 aa25.34■■□□□ 1.65
RPN1-208ENST00000497415 ITGB4P16144 1822 aa25.34■■□□□ 1.65
RPN1-208ENST00000497415 PAPPAQ13219 1627 aa25.34■■□□□ 1.65
RPN1-208ENST00000497415 KDRP35968 1356 aa25.32■■□□□ 1.64
RPN1-208ENST00000497415 PHKG2P15735 406 aa25.32■■□□□ 1.64
RPN1-208ENST00000497415 SLC27A3Q5K4L6 730 aa25.32■■□□□ 1.64
RPN1-208ENST00000497415 AEBP1Q8IUX7 1158 aa25.32■■□□□ 1.64
RPN1-208ENST00000497415 IFNL2Q8IZJ0 200 aa25.32■■□□□ 1.64
RPN1-208ENST00000497415 LRRC4BQ9NT99 713 aa25.32■■□□□ 1.64
RPN1-208ENST00000497415 SRCAPQ6ZRS2 3230 aa25.32■■□□□ 1.64
RPN1-208ENST00000497415 SLC15A2Q16348 729 aa25.31■■□□□ 1.64
RPN1-208ENST00000497415 STK32BQ9NY57 414 aa25.31■■□□□ 1.64
RPN1-208ENST00000497415 SULT6B1Q6IMI4 303 aa25.3■■□□□ 1.64
RPN1-208ENST00000497415 CNGB1Q14028 1251 aaPredicted RBP25.29■■□□□ 1.64
RPN1-208ENST00000497415 PLEKHO1Q53GL0 409 aaPredicted RBP25.29■■□□□ 1.64
RPN1-208ENST00000497415 CASZ1Q86V15 1759 aa25.28■■□□□ 1.64
RPN1-208ENST00000497415 AMOTQ4VCS5 1084 aa25.28■■□□□ 1.64
RPN1-208ENST00000497415 COL3A1P02461 1466 aaPredicted RBP25.28■■□□□ 1.64
RPN1-208ENST00000497415 DIAPH1O60610 1272 aaKnown RBP25.27■■□□□ 1.64
RPN1-208ENST00000497415 MPRIPQ6WCQ1 1025 aa25.27■■□□□ 1.64
RPN1-208ENST00000497415 PIGBQ92521 554 aa25.24■■□□□ 1.63
RPN1-208ENST00000497415 AKT1S1Q96B36 256 aa25.23■■□□□ 1.63
RPN1-208ENST00000497415 HSP90AB1P08238 724 aaKnown RBP25.22■■□□□ 1.63
RPN1-208ENST00000497415 KCNQ4P56696 695 aa25.22■■□□□ 1.63
RPN1-208ENST00000497415 ZNF827Q17R98 1081 aa25.22■■□□□ 1.63
RPN1-208ENST00000497415 ZNF530Q6P9A1 599 aaPredicted RBP25.22■■□□□ 1.63
RPN1-208ENST00000497415 PDGFDQ9GZP0 370 aaPredicted RBP25.22■■□□□ 1.63
RPN1-208ENST00000497415 CCNL1Q9UK58 526 aaPredicted RBP25.22■■□□□ 1.63
RPN1-208ENST00000497415 PALLDQ8WX93 1383 aa25.21■■□□□ 1.63
RPN1-208ENST00000497415 SMARCC1Q92922 1105 aaPredicted RBP25.21■■□□□ 1.63
RPN1-208ENST00000497415 DCAF5Q96JK2 942 aa25.21■■□□□ 1.63
RPN1-208ENST00000497415 QSER1Q2KHR3 1735 aa25.2■■□□□ 1.63
RPN1-208ENST00000497415 PPP2R1AP30153 589 aa25.2■■□□□ 1.62
RPN1-208ENST00000497415 SPON1Q9HCB6 807 aa25.2■■□□□ 1.62
RPN1-208ENST00000497415 TMOD3Q9NYL9 352 aa25.2■■□□□ 1.62
RPN1-208ENST00000497415 ERVV-2B6SEH9 535 aa25.19■■□□□ 1.62
RPN1-208ENST00000497415 HMOX1P09601 288 aa25.19■■□□□ 1.62
RPN1-208ENST00000497415 KDM6AO15550 1401 aaPredicted RBP25.18■■□□□ 1.62
RPN1-208ENST00000497415 TAF1LQ8IZX4 1826 aa25.17■■□□□ 1.62
RPN1-208ENST00000497415 C1orf141Q5JVX7 400 aa25.17■■□□□ 1.62
RPN1-208ENST00000497415 CFAP53Q96M91 514 aa25.16■■□□□ 1.62
RPN1-208ENST00000497415 TUBGCP6Q96RT7 1819 aa25.16■■□□□ 1.62
RPN1-208ENST00000497415 C5P01031 1676 aa25.16■■□□□ 1.62
RPN1-208ENST00000497415 HMGB2P26583 209 aaKnown RBP25.15■■□□□ 1.62
RPN1-208ENST00000497415 ASAP1Q9ULH1 1129 aa25.14■■□□□ 1.62
RPN1-208ENST00000497415 SCN11AQ9UI33 1791 aa25.13■■□□□ 1.61
RPN1-208ENST00000497415 U2SURPO15042 1029 aaKnown RBP25.13■■□□□ 1.61
RPN1-208ENST00000497415 ZBTB7AO95365 584 aa25.13■■□□□ 1.61
RPN1-208ENST00000497415 ZEB1P37275 1124 aaPredicted RBP25.13■■□□□ 1.61
RPN1-208ENST00000497415 AKAP4Q5JQC9 854 aa25.13■■□□□ 1.61
RPN1-208ENST00000497415 ATG3Q9NT62 314 aa25.12■■□□□ 1.61
RPN1-208ENST00000497415 PNPLA7Q6ZV29 1317 aa25.12■■□□□ 1.61
RPN1-208ENST00000497415 MTFR1LQ9H019 292 aa25.11■■□□□ 1.61
RPN1-208ENST00000497415 TFCP2L1Q9NZI6 479 aa25.11■■□□□ 1.61
RPN1-208ENST00000497415 LOC102724428A0A0B4J2F2 783 aa25.1■■□□□ 1.61
RPN1-208ENST00000497415 PTGER2P43116 358 aa25.1■■□□□ 1.61
RPN1-208ENST00000497415 SIK1P57059 783 aa25.1■■□□□ 1.61
RPN1-208ENST00000497415 CABP4P57796 275 aa25.1■■□□□ 1.61
RPN1-208ENST00000497415 MTHFSDQ2M296 383 aaKnown RBP25.1■■□□□ 1.61
RPN1-208ENST00000497415 VIRMAQ69YN4 1812 aaKnown RBP25.09■■□□□ 1.61
RPN1-208ENST00000497415 DDX10Q13206 875 aaKnown RBP25.08■■□□□ 1.61
RPN1-208ENST00000497415 SLC16A10Q8TF71 515 aa25.08■■□□□ 1.61
RPN1-208ENST00000497415 NUDCQ9Y266 331 aa25.08■■□□□ 1.61
RPN1-208ENST00000497415 ATF5Q9Y2D1 282 aaPredicted RBP25.08■■□□□ 1.61
RPN1-208ENST00000497415 C4BP0C0L5 1744 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms