RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 ILDR2Q71H61 639 aa19.34■□□□□ 0.69
USP11-212ENST00000497179 HMOX1P09601 288 aa19.33■□□□□ 0.68
USP11-212ENST00000497179 EXOC5O00471 708 aa19.32■□□□□ 0.68
USP11-212ENST00000497179 KRT27Q7Z3Y8 459 aa19.32■□□□□ 0.68
USP11-212ENST00000497179 U2AF1L5P0DN76 240 aaPredicted RBP19.31■□□□□ 0.68
USP11-212ENST00000497179 U2AF1Q01081 240 aaKnown RBP eCLIP19.31■□□□□ 0.68
USP11-212ENST00000497179 PDE3BQ13370 1112 aa19.31■□□□□ 0.68
USP11-212ENST00000497179 ZCRB1Q8TBF4 217 aaKnown RBP19.31■□□□□ 0.68
USP11-212ENST00000497179 EP400Q96L91 3159 aa19.3■□□□□ 0.68
USP11-212ENST00000497179 CCDC184Q52MB2 194 aa19.3■□□□□ 0.68
USP11-212ENST00000497179 RSPH6AQ9H0K4 717 aa19.3■□□□□ 0.68
USP11-212ENST00000497179 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.3■□□□□ 0.68
USP11-212ENST00000497179 FCHSD2O94868 740 aa19.28■□□□□ 0.68
USP11-212ENST00000497179 MARCH10Q8NA82 808 aaPredicted RBP19.28■□□□□ 0.68
USP11-212ENST00000497179 SPG7Q9UQ90 795 aa19.28■□□□□ 0.68
USP11-212ENST00000497179 PCDH11XQ9BZA7 1347 aa19.27■□□□□ 0.68
USP11-212ENST00000497179 PCDH11YQ9BZA8 1340 aa19.27■□□□□ 0.68
USP11-212ENST00000497179 BCL9O00512 1426 aa19.27■□□□□ 0.68
USP11-212ENST00000497179 AMOTQ4VCS5 1084 aa19.27■□□□□ 0.68
USP11-212ENST00000497179 MRS2Q9HD23 443 aa19.27■□□□□ 0.68
USP11-212ENST00000497179 PRKAR2BP31323 418 aa19.26■□□□□ 0.67
USP11-212ENST00000497179 WDR43Q15061 677 aaKnown RBP eCLIP19.26■□□□□ 0.67
USP11-212ENST00000497179 PLEKHO1Q53GL0 409 aaPredicted RBP19.26■□□□□ 0.67
USP11-212ENST00000497179 CYP27B1O15528 508 aa19.24■□□□□ 0.67
USP11-212ENST00000497179 FAM182BQ5T319 152 aa19.24■□□□□ 0.67
USP11-212ENST00000497179 DDX54Q8TDD1 881 aaKnown RBP19.24■□□□□ 0.67
USP11-212ENST00000497179 CCER2I3L3R5 266 aa19.22■□□□□ 0.67
USP11-212ENST00000497179 PHKG2P15735 406 aa19.22■□□□□ 0.67
USP11-212ENST00000497179 ZNF530Q6P9A1 599 aaPredicted RBP19.22■□□□□ 0.67
USP11-212ENST00000497179 FAM196AQ6ZSG2 479 aa19.22■□□□□ 0.67
USP11-212ENST00000497179 PNISRQ8TF01 805 aaKnown RBP19.22■□□□□ 0.67
USP11-212ENST00000497179 IFNL2Q8IZJ0 200 aa19.21■□□□□ 0.67
USP11-212ENST00000497179 PHACTR3Q96KR7 559 aa19.21■□□□□ 0.67
USP11-212ENST00000497179 PLEKHF1Q96S99 279 aa19.21■□□□□ 0.67
USP11-212ENST00000497179 PNNQ9H307 717 aaKnown RBP19.21■□□□□ 0.67
USP11-212ENST00000497179 ADAMTS8Q9UP79 889 aa19.21■□□□□ 0.67
USP11-212ENST00000497179 NHSQ6T4R5 1651 aa19.2■□□□□ 0.66
USP11-212ENST00000497179 DOT1LQ8TEK3 1739 aa19.2■□□□□ 0.66
USP11-212ENST00000497179 NKX1-1Q15270 411 aaPredicted RBP19.2■□□□□ 0.66
USP11-212ENST00000497179 MTHFSDQ2M296 383 aaKnown RBP19.2■□□□□ 0.66
USP11-212ENST00000497179 MIER1Q8N108 512 aa19.2■□□□□ 0.66
USP11-212ENST00000497179 TOGARAM1Q9Y4F4 1720 aa19.2■□□□□ 0.66
USP11-212ENST00000497179 SBF2Q86WG5 1849 aa19.19■□□□□ 0.66
USP11-212ENST00000497179 GAS2L2Q8NHY3 880 aa19.19■□□□□ 0.66
USP11-212ENST00000497179 ADAMTS7Q9UKP4 1686 aa19.18■□□□□ 0.66
USP11-212ENST00000497179 C1orf141Q5JVX7 400 aa19.18■□□□□ 0.66
USP11-212ENST00000497179 MAPK8IP3Q9UPT6 1336 aa19.18■□□□□ 0.66
USP11-212ENST00000497179 TNS1Q9HBL0 1735 aaKnown RBP19.17■□□□□ 0.66
USP11-212ENST00000497179 NEFMP07197 916 aa19.17■□□□□ 0.66
USP11-212ENST00000497179 HSP90AB1P08238 724 aaKnown RBP19.17■□□□□ 0.66
USP11-212ENST00000497179 AKAP4Q5JQC9 854 aa19.17■□□□□ 0.66
USP11-212ENST00000497179 KDM6AO15550 1401 aaPredicted RBP19.17■□□□□ 0.66
USP11-212ENST00000497179 MAP3K5Q99683 1374 aa19.16■□□□□ 0.66
USP11-212ENST00000497179 CCDC146Q8IYE0 955 aa19.15■□□□□ 0.66
USP11-212ENST00000497179 RUNDC1Q96C34 613 aa19.15■□□□□ 0.66
USP11-212ENST00000497179 DCAF5Q96JK2 942 aa19.14■□□□□ 0.65
USP11-212ENST00000497179 SCN11AQ9UI33 1791 aa19.14■□□□□ 0.65
USP11-212ENST00000497179 NFE2L2Q16236 605 aa19.13■□□□□ 0.65
USP11-212ENST00000497179 MRC1P22897 1456 aa19.12■□□□□ 0.65
USP11-212ENST00000497179 GNAT3A8MTJ3 354 aa19.12■□□□□ 0.65
USP11-212ENST00000497179 TRIM37O94972 964 aa19.12■□□□□ 0.65
USP11-212ENST00000497179 UPF1Q92900 1129 aaKnown RBP eCLIP19.12■□□□□ 0.65
USP11-212ENST00000497179 ACSBG1Q96GR2 724 aa19.12■□□□□ 0.65
USP11-212ENST00000497179 BCL11BQ9C0K0 894 aaPredicted RBP19.12■□□□□ 0.65
USP11-212ENST00000497179 KCNQ2O43526 872 aa19.11■□□□□ 0.65
USP11-212ENST00000497179 MPRIPQ6WCQ1 1025 aa19.11■□□□□ 0.65
USP11-212ENST00000497179 CCDC125Q86Z20 511 aa19.11■□□□□ 0.65
USP11-212ENST00000497179 DLG5Q8TDM6 1919 aa19.11■□□□□ 0.65
USP11-212ENST00000497179 ITGB4P16144 1822 aa19.11■□□□□ 0.65
USP11-212ENST00000497179 BTAF1O14981 1849 aa19.1■□□□□ 0.65
USP11-212ENST00000497179 VIRMAQ69YN4 1812 aaKnown RBP19.1■□□□□ 0.65
USP11-212ENST00000497179 ERVV-2B6SEH9 535 aa19.1■□□□□ 0.65
USP11-212ENST00000497179 PRIM1P49642 420 aaKnown RBP19.1■□□□□ 0.65
USP11-212ENST00000497179 FAM9BQ8IZU0 186 aa19.1■□□□□ 0.65
USP11-212ENST00000497179 RNMTO43148 476 aaKnown RBP19.09■□□□□ 0.65
USP11-212ENST00000497179 HTATSF1O43719 755 aaKnown RBP19.09■□□□□ 0.65
USP11-212ENST00000497179 TMPOP42166 694 aaKnown RBP19.09■□□□□ 0.65
USP11-212ENST00000497179 PTF1AQ7RTS3 328 aa19.09■□□□□ 0.65
USP11-212ENST00000497179 CEMIPQ8WUJ3 1361 aa19.08■□□□□ 0.65
USP11-212ENST00000497179 SYTL4Q96C24 671 aaPredicted RBP19.08■□□□□ 0.64
USP11-212ENST00000497179 LGR6Q9HBX8 967 aa19.08■□□□□ 0.64
USP11-212ENST00000497179 RGPD3A6NKT7 1758 aaPredicted RBP19.08■□□□□ 0.64
USP11-212ENST00000497179 RGPD4Q7Z3J3 1758 aa19.08■□□□□ 0.64
USP11-212ENST00000497179 SOCS7O14512 581 aa19.06■□□□□ 0.64
USP11-212ENST00000497179 SF3B2Q13435 895 aaKnown RBP19.06■□□□□ 0.64
USP11-212ENST00000497179 IL17REQ8NFR9 667 aa19.06■□□□□ 0.64
USP11-212ENST00000497179 RTF1Q92541 710 aaKnown RBP19.06■□□□□ 0.64
USP11-212ENST00000497179 TMOD3Q9NYL9 352 aa19.06■□□□□ 0.64
USP11-212ENST00000497179 SIPA1L3O60292 1781 aaPredicted RBP19.06■□□□□ 0.64
USP11-212ENST00000497179 APAF1O14727 1248 aa19.05■□□□□ 0.64
USP11-212ENST00000497179 RIPK4P57078 832 aa19.05■□□□□ 0.64
USP11-212ENST00000497179 SLC52A2Q9HAB3 445 aa19.05■□□□□ 0.64
USP11-212ENST00000497179 RRP7AQ9Y3A4 280 aaKnown RBP19.05■□□□□ 0.64
USP11-212ENST00000497179 PAPPAQ13219 1627 aa19.04■□□□□ 0.64
USP11-212ENST00000497179 APBA3O96018 575 aa19.04■□□□□ 0.64
USP11-212ENST00000497179 CABP4P57796 275 aa19.04■□□□□ 0.64
USP11-212ENST00000497179 LMOD3Q0VAK6 560 aa19.04■□□□□ 0.64
USP11-212ENST00000497179 PIGBQ92521 554 aa19.04■□□□□ 0.64
USP11-212ENST00000497179 BAG6P46379 1132 aa19.03■□□□□ 0.64
USP11-212ENST00000497179 MCM10Q7L590 875 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms