RNA–Protein interactions for RNA: ENST00000496360.5

MACF1-223, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 2,080 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-223ENST00000496360 KIF2CQ99661 725 aa18.46■□□□□ 0.55
MACF1-223ENST00000496360 ZSCAN23Q3MJ62 389 aa18.45■□□□□ 0.54
MACF1-223ENST00000496360 SSFA2P28290 1259 aa18.45■□□□□ 0.54
MACF1-223ENST00000496360 DDX17Q92841 729 aaKnown RBP18.45■□□□□ 0.54
MACF1-223ENST00000496360 PRIMPOLQ96LW4 560 aa18.45■□□□□ 0.54
MACF1-223ENST00000496360 PRAM1Q96QH2 718 aa18.45■□□□□ 0.54
MACF1-223ENST00000496360 SBNO2Q9Y2G9 1366 aa18.44■□□□□ 0.54
MACF1-223ENST00000496360 HMGN5P82970 282 aaKnown RBP18.44■□□□□ 0.54
MACF1-223ENST00000496360 CHMP4BQ9H444 224 aaKnown RBP18.44■□□□□ 0.54
MACF1-223ENST00000496360 CWC22Q9HCG8 908 aaKnown RBP18.44■□□□□ 0.54
MACF1-223ENST00000496360 TNNQ9UQP3 1299 aa18.44■□□□□ 0.54
MACF1-223ENST00000496360 SPATA31A6Q5VVP1 1343 aa18.43■□□□□ 0.54
MACF1-223ENST00000496360 TRAK1Q9UPV9 953 aa18.43■□□□□ 0.54
MACF1-223ENST00000496360 USP32Q8NFA0 1604 aa18.42■□□□□ 0.54
MACF1-223ENST00000496360 FGD1P98174 961 aa18.42■□□□□ 0.54
MACF1-223ENST00000496360 XPCQ01831 940 aaPredicted RBP18.42■□□□□ 0.54
MACF1-223ENST00000496360 MYRIPQ8NFW9 859 aa18.42■□□□□ 0.54
MACF1-223ENST00000496360 LRRC59Q96AG4 307 aaKnown RBP18.42■□□□□ 0.54
MACF1-223ENST00000496360 ADGRB2O60241 1585 aa18.42■□□□□ 0.54
MACF1-223ENST00000496360 CYP2E1P05181 493 aaPredicted RBP18.42■□□□□ 0.54
MACF1-223ENST00000496360 SAFB2Q14151 953 aaKnown RBP eCLIP18.42■□□□□ 0.54
MACF1-223ENST00000496360 ESCO1Q5FWF5 840 aa18.42■□□□□ 0.54
MACF1-223ENST00000496360 FMN2Q9NZ56 1722 aa18.41■□□□□ 0.54
MACF1-223ENST00000496360 NUTM2FA1L443 756 aa18.41■□□□□ 0.54
MACF1-223ENST00000496360 RABEP1Q15276 862 aa18.41■□□□□ 0.54
MACF1-223ENST00000496360 CFAP53Q96M91 514 aa18.41■□□□□ 0.54
MACF1-223ENST00000496360 RBSNQ9H1K0 784 aa18.41■□□□□ 0.54
MACF1-223ENST00000496360 LMBRD1Q9NUN5 540 aa18.41■□□□□ 0.54
MACF1-223ENST00000496360 LETM1O95202 739 aaPredicted RBP18.4■□□□□ 0.54
MACF1-223ENST00000496360 GTF2F1P35269 517 aaKnown RBP eCLIP18.4■□□□□ 0.54
MACF1-223ENST00000496360 ATF7IPQ6VMQ6 1270 aa18.4■□□□□ 0.54
MACF1-223ENST00000496360 CHD1LQ86WJ1 897 aa18.4■□□□□ 0.54
MACF1-223ENST00000496360 IPO8O15397 1037 aaKnown RBP18.4■□□□□ 0.54
MACF1-223ENST00000496360 LRSAM1Q6UWE0 723 aa18.4■□□□□ 0.54
MACF1-223ENST00000496360 ZBTB40Q9NUA8 1239 aa18.4■□□□□ 0.54
MACF1-223ENST00000496360 SOS2Q07890 1332 aaPredicted RBP18.39■□□□□ 0.54
MACF1-223ENST00000496360 KIAA2012Q0VF49 1180 aa18.39■□□□□ 0.53
MACF1-223ENST00000496360 TAF3Q5VWG9 929 aa18.39■□□□□ 0.53
MACF1-223ENST00000496360 CAVIN1Q6NZI2 390 aaKnown RBP18.39■□□□□ 0.53
MACF1-223ENST00000496360 GAS2L2Q8NHY3 880 aa18.39■□□□□ 0.53
MACF1-223ENST00000496360 GCC1Q96CN9 775 aa18.39■□□□□ 0.53
MACF1-223ENST00000496360 ZSCAN20P17040 1043 aaPredicted RBP18.38■□□□□ 0.53
MACF1-223ENST00000496360 BCL2L13Q9BXK5 485 aa18.38■□□□□ 0.53
MACF1-223ENST00000496360 RGS17Q9UGC6 210 aaPredicted RBP18.38■□□□□ 0.53
MACF1-223ENST00000496360 LRP6O75581 1613 aa18.38■□□□□ 0.53
MACF1-223ENST00000496360 IL16Q14005 1332 aa18.38■□□□□ 0.53
MACF1-223ENST00000496360 TRIM27P14373 513 aa18.38■□□□□ 0.53
MACF1-223ENST00000496360 ITPRIPQ8IWB1 547 aa18.38■□□□□ 0.53
MACF1-223ENST00000496360 CARD14Q9BXL6 1004 aa18.38■□□□□ 0.53
MACF1-223ENST00000496360 SMC4Q9NTJ3 1288 aa18.37■□□□□ 0.53
MACF1-223ENST00000496360 NPHP3Q7Z494 1330 aa18.37■□□□□ 0.53
MACF1-223ENST00000496360 MBD3O95983 291 aa18.37■□□□□ 0.53
MACF1-223ENST00000496360 PNPLA6Q8IY17 1366 aa18.36■□□□□ 0.53
MACF1-223ENST00000496360 MCTP1Q6DN14 999 aa18.36■□□□□ 0.53
MACF1-223ENST00000496360 MORC1Q86VD1 984 aa18.35■□□□□ 0.53
MACF1-223ENST00000496360 FOXO3O43524 673 aa18.35■□□□□ 0.53
MACF1-223ENST00000496360 PRIM1P49642 420 aaKnown RBP18.35■□□□□ 0.53
MACF1-223ENST00000496360 MEX3CQ5U5Q3 659 aaKnown RBP18.35■□□□□ 0.53
MACF1-223ENST00000496360 ARHGEF28Q8N1W1 1705 aaKnown RBP18.34■□□□□ 0.53
MACF1-223ENST00000496360 NUTM2BA6NNL0 878 aaPredicted RBP18.34■□□□□ 0.53
MACF1-223ENST00000496360 NUTM2EB1AL46 878 aaPredicted RBP18.34■□□□□ 0.53
MACF1-223ENST00000496360 SOCS7O14512 581 aa18.34■□□□□ 0.53
MACF1-223ENST00000496360 CD2BP2O95400 341 aaKnown RBP18.34■□□□□ 0.53
MACF1-223ENST00000496360 NUTM2AQ8IVF1 878 aaPredicted RBP18.34■□□□□ 0.53
MACF1-223ENST00000496360 MINK1Q8N4C8 1332 aaPredicted RBP18.34■□□□□ 0.53
MACF1-223ENST00000496360 CDC45O75419 566 aa18.34■□□□□ 0.53
MACF1-223ENST00000496360 NEUROD2Q15784 382 aa18.34■□□□□ 0.53
MACF1-223ENST00000496360 KLHL34Q8N239 644 aa18.34■□□□□ 0.53
MACF1-223ENST00000496360 KIF1AQ12756 1690 aa18.33■□□□□ 0.53
MACF1-223ENST00000496360 PXDNQ92626 1479 aa18.33■□□□□ 0.52
MACF1-223ENST00000496360 A0A0U1RQG5 324 aaPredicted RBP18.33■□□□□ 0.52
MACF1-223ENST00000496360 ZNF428Q96B54 188 aa18.33■□□□□ 0.52
MACF1-223ENST00000496360 RRP7AQ9Y3A4 280 aaKnown RBP18.33■□□□□ 0.52
MACF1-223ENST00000496360 ANKARQ7Z5J8 1434 aa18.32■□□□□ 0.52
MACF1-223ENST00000496360 NSD2O96028 1365 aa18.32■□□□□ 0.52
MACF1-223ENST00000496360 TBC1D9Q6ZT07 1266 aa18.32■□□□□ 0.52
MACF1-223ENST00000496360 ALDH1L2Q3SY69 923 aa18.32■□□□□ 0.52
MACF1-223ENST00000496360 RGPD8O14715 1765 aaPredicted RBP18.31■□□□□ 0.52
MACF1-223ENST00000496360 BRPF1P55201 1214 aaPredicted RBP18.31■□□□□ 0.52
MACF1-223ENST00000496360 PHF8Q9UPP1 1060 aa18.31■□□□□ 0.52
MACF1-223ENST00000496360 UVSSAQ2YD98 709 aa18.3■□□□□ 0.52
MACF1-223ENST00000496360 SYAP1Q96A49 352 aaPredicted RBP18.3■□□□□ 0.52
MACF1-223ENST00000496360 LNPKQ9C0E8 428 aa18.3■□□□□ 0.52
MACF1-223ENST00000496360 ZHX1Q9UKY1 873 aaPredicted RBP18.3■□□□□ 0.52
MACF1-223ENST00000496360 WASLO00401 505 aaPredicted RBP18.3■□□□□ 0.52
MACF1-223ENST00000496360 POTEAQ6S8J7 498 aa18.3■□□□□ 0.52
MACF1-223ENST00000496360 FOXD4L1Q9NU39 408 aa18.3■□□□□ 0.52
MACF1-223ENST00000496360 NSD3Q9BZ95 1437 aa18.3■□□□□ 0.52
MACF1-223ENST00000496360 FAM184AQ8NB25 1140 aa18.29■□□□□ 0.52
MACF1-223ENST00000496360 SSH1Q8WYL5 1049 aa18.29■□□□□ 0.52
MACF1-223ENST00000496360 TMEM57Q8N5G2 664 aa18.29■□□□□ 0.52
MACF1-223ENST00000496360 PIBF1Q8WXW3 757 aa18.29■□□□□ 0.52
MACF1-223ENST00000496360 PTMAP06454 111 aaKnown RBP18.28■□□□□ 0.52
MACF1-223ENST00000496360 TULP4Q9NRJ4 1543 aa18.28■□□□□ 0.52
MACF1-223ENST00000496360 PHF14O94880 888 aa18.27■□□□□ 0.52
MACF1-223ENST00000496360 NOB1Q9ULX3 412 aaKnown RBP18.27■□□□□ 0.52
MACF1-223ENST00000496360 EXOSC9Q06265 439 aaKnown RBP18.27■□□□□ 0.51
MACF1-223ENST00000496360 PPP4R3BQ5MIZ7 849 aa18.27■□□□□ 0.51
MACF1-223ENST00000496360 KRT28Q7Z3Y7 464 aa18.27■□□□□ 0.51
MACF1-223ENST00000496360 GPT2Q8TD30 523 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms