RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 CLUAP1Q96AJ1 413 aa17.58■□□□□ 0.4
SPTBN1-205ENST00000496323 KDM2BQ8NHM5 1336 aa17.58■□□□□ 0.4
SPTBN1-205ENST00000496323 ELL2O00472 640 aaPredicted RBP17.57■□□□□ 0.4
SPTBN1-205ENST00000496323 NOB1Q9ULX3 412 aaKnown RBP17.57■□□□□ 0.4
SPTBN1-205ENST00000496323 TRIM27P14373 513 aa17.57■□□□□ 0.4
SPTBN1-205ENST00000496323 CABLES1Q8TDN4 633 aa17.57■□□□□ 0.4
SPTBN1-205ENST00000496323 ANKRD24Q8TF21 1146 aa17.57■□□□□ 0.4
SPTBN1-205ENST00000496323 RTF1Q92541 710 aaKnown RBP17.57■□□□□ 0.4
SPTBN1-205ENST00000496323 HTATSF1O43719 755 aaKnown RBP17.56■□□□□ 0.4
SPTBN1-205ENST00000496323 BRPF1P55201 1214 aaPredicted RBP17.56■□□□□ 0.4
SPTBN1-205ENST00000496323 TWISTNBQ3B726 338 aaPredicted RBP17.56■□□□□ 0.4
SPTBN1-205ENST00000496323 NCAPD2Q15021 1401 aa17.56■□□□□ 0.4
SPTBN1-205ENST00000496323 GNAT3A8MTJ3 354 aa17.55■□□□□ 0.4
SPTBN1-205ENST00000496323 ATF7IPQ6VMQ6 1270 aa17.55■□□□□ 0.4
SPTBN1-205ENST00000496323 DZIP1LQ8IYY4 767 aaKnown RBP17.55■□□□□ 0.4
SPTBN1-205ENST00000496323 KRT24Q2M2I5 525 aa17.55■□□□□ 0.4
SPTBN1-205ENST00000496323 MRPL50Q8N5N7 158 aaKnown RBP17.54■□□□□ 0.4
SPTBN1-205ENST00000496323 MIS18AQ9NYP9 233 aa17.54■□□□□ 0.4
SPTBN1-205ENST00000496323 SOS2Q07890 1332 aaPredicted RBP17.54■□□□□ 0.4
SPTBN1-205ENST00000496323 IL17REQ8NFR9 667 aa17.53■□□□□ 0.4
SPTBN1-205ENST00000496323 KIF16BQ96L93 1317 aa17.53■□□□□ 0.4
SPTBN1-205ENST00000496323 MAP3K5Q99683 1374 aa17.53■□□□□ 0.4
SPTBN1-205ENST00000496323 MVPQ14764 893 aaKnown RBP17.53■□□□□ 0.4
SPTBN1-205ENST00000496323 ERBB3P21860 1342 aa17.52■□□□□ 0.4
SPTBN1-205ENST00000496323 FTSJ3Q8IY81 847 aaKnown RBP17.52■□□□□ 0.4
SPTBN1-205ENST00000496323 KIAA0232Q92628 1395 aa17.51■□□□□ 0.39
SPTBN1-205ENST00000496323 TCERG1O14776 1098 aaKnown RBP17.51■□□□□ 0.39
SPTBN1-205ENST00000496323 MS4A1P11836 297 aa17.51■□□□□ 0.39
SPTBN1-205ENST00000496323 CENPQQ7L2Z9 268 aaPredicted RBP17.51■□□□□ 0.39
SPTBN1-205ENST00000496323 IPO8O15397 1037 aaKnown RBP17.51■□□□□ 0.39
SPTBN1-205ENST00000496323 AAMPQ13685 434 aa17.5■□□□□ 0.39
SPTBN1-205ENST00000496323 TSPYL4Q9UJ04 414 aa17.5■□□□□ 0.39
SPTBN1-205ENST00000496323 IGHDP01880 384 aa17.49■□□□□ 0.39
SPTBN1-205ENST00000496323 SKAP1Q86WV1 359 aa17.49■□□□□ 0.39
SPTBN1-205ENST00000496323 CHRNA2Q15822 529 aa17.49■□□□□ 0.39
SPTBN1-205ENST00000496323 TMEM57Q8N5G2 664 aa17.48■□□□□ 0.39
SPTBN1-205ENST00000496323 ARHGAP45Q92619 1136 aa17.48■□□□□ 0.39
SPTBN1-205ENST00000496323 RBM19Q9Y4C8 960 aaKnown RBP17.48■□□□□ 0.39
SPTBN1-205ENST00000496323 PCDHB15Q9Y5E8 787 aa17.48■□□□□ 0.39
SPTBN1-205ENST00000496323 CPDO75976 1380 aa17.48■□□□□ 0.39
SPTBN1-205ENST00000496323 LRRC37A3O60309 1634 aa17.48■□□□□ 0.39
SPTBN1-205ENST00000496323 CEMIPQ8WUJ3 1361 aa17.48■□□□□ 0.39
SPTBN1-205ENST00000496323 RGPD2P0DJD1 1756 aa17.47■□□□□ 0.39
SPTBN1-205ENST00000496323 PLEKHO1Q53GL0 409 aaPredicted RBP17.47■□□□□ 0.39
SPTBN1-205ENST00000496323 CAMTA1Q9Y6Y1 1673 aa17.47■□□□□ 0.39
SPTBN1-205ENST00000496323 CRYBG1Q9Y4K1 1723 aa17.46■□□□□ 0.39
SPTBN1-205ENST00000496323 AMOTQ4VCS5 1084 aa17.46■□□□□ 0.39
SPTBN1-205ENST00000496323 ITPRIPQ8IWB1 547 aa17.46■□□□□ 0.39
SPTBN1-205ENST00000496323 LGR6Q9HBX8 967 aa17.46■□□□□ 0.39
SPTBN1-205ENST00000496323 COL18A1P39060 1754 aa17.46■□□□□ 0.39
SPTBN1-205ENST00000496323 TAF7Q15545 349 aaPredicted RBP17.45■□□□□ 0.38
SPTBN1-205ENST00000496323 ZNF530Q6P9A1 599 aaPredicted RBP17.45■□□□□ 0.38
SPTBN1-205ENST00000496323 LMO7Q8WWI1 1683 aa17.45■□□□□ 0.38
SPTBN1-205ENST00000496323 AKAP4Q5JQC9 854 aa17.45■□□□□ 0.38
SPTBN1-205ENST00000496323 HAP1P54257 671 aaPredicted RBP17.44■□□□□ 0.38
SPTBN1-205ENST00000496323 BABAM1Q9NWV8 329 aa17.44■□□□□ 0.38
SPTBN1-205ENST00000496323 NLRP2Q9NX02 1062 aa17.44■□□□□ 0.38
SPTBN1-205ENST00000496323 DDX19BQ9UMR2 479 aa17.44■□□□□ 0.38
SPTBN1-205ENST00000496323 ABCC6O95255 1503 aa17.43■□□□□ 0.38
SPTBN1-205ENST00000496323 ABCC4O15439 1325 aa17.42■□□□□ 0.38
SPTBN1-205ENST00000496323 MPRIPQ6WCQ1 1025 aa17.42■□□□□ 0.38
SPTBN1-205ENST00000496323 ZBTB40Q9NUA8 1239 aa17.42■□□□□ 0.38
SPTBN1-205ENST00000496323 RGPD5Q99666 1765 aa17.42■□□□□ 0.38
SPTBN1-205ENST00000496323 CSB-PGBD3P0DP91 1061 aa17.41■□□□□ 0.38
SPTBN1-205ENST00000496323 API5Q9BZZ5 524 aaKnown RBP17.4■□□□□ 0.38
SPTBN1-205ENST00000496323 C1orf141Q5JVX7 400 aa17.4■□□□□ 0.38
SPTBN1-205ENST00000496323 PRDM11Q9NQV5 511 aa17.4■□□□□ 0.38
SPTBN1-205ENST00000496323 RNMTO43148 476 aaKnown RBP17.39■□□□□ 0.37
SPTBN1-205ENST00000496323 RAPGEF4Q8WZA2 1011 aa17.39■□□□□ 0.37
SPTBN1-205ENST00000496323 RGS12O14924 1447 aa17.39■□□□□ 0.37
SPTBN1-205ENST00000496323 FAM208AQ9UK61 1670 aaKnown RBP17.39■□□□□ 0.37
SPTBN1-205ENST00000496323 NHSL1Q5SYE7 1610 aa17.39■□□□□ 0.37
SPTBN1-205ENST00000496323 MEGF6O75095 1541 aa17.39■□□□□ 0.37
SPTBN1-205ENST00000496323 ZBTB7BO15156 539 aaPredicted RBP17.39■□□□□ 0.37
SPTBN1-205ENST00000496323 SLC4A2P04920 1241 aa17.39■□□□□ 0.37
SPTBN1-205ENST00000496323 LTBP4Q8N2S1 1624 aa17.38■□□□□ 0.37
SPTBN1-205ENST00000496323 KCNQ3O43525 872 aa17.36■□□□□ 0.37
SPTBN1-205ENST00000496323 TATP17735 454 aaPredicted RBP17.36■□□□□ 0.37
SPTBN1-205ENST00000496323 TEFQ10587 303 aa17.36■□□□□ 0.37
SPTBN1-205ENST00000496323 G2E3Q7L622 706 aa17.36■□□□□ 0.37
SPTBN1-205ENST00000496323 RWDD1Q9H446 243 aaPredicted RBP17.36■□□□□ 0.37
SPTBN1-205ENST00000496323 OVOS2A0A0G2JMS6 1433 aa17.36■□□□□ 0.37
SPTBN1-205ENST00000496323 PTPRCP08575 1304 aa17.36■□□□□ 0.37
SPTBN1-205ENST00000496323 EIF4A1P60842 406 aaKnown RBP17.36■□□□□ 0.37
SPTBN1-205ENST00000496323 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.36■□□□□ 0.378e-22■□□□□ 10.8
SPTBN1-205ENST00000496323 SOS1Q07889 1333 aaPredicted RBP17.35■□□□□ 0.37
SPTBN1-205ENST00000496323 WDR17Q8IZU2 1322 aa17.35■□□□□ 0.37
SPTBN1-205ENST00000496323 BTBD11A6QL63 1104 aa17.35■□□□□ 0.37
SPTBN1-205ENST00000496323 HDAC1Q13547 482 aaPredicted RBP17.35■□□□□ 0.37
SPTBN1-205ENST00000496323 INTS3Q68E01 1043 aaKnown RBP17.34■□□□□ 0.37
SPTBN1-205ENST00000496323 COL5A2P05997 1499 aaPredicted RBP17.34■□□□□ 0.37
SPTBN1-205ENST00000496323 PHKG2P15735 406 aa17.33■□□□□ 0.37
SPTBN1-205ENST00000496323 CCDC30Q5VVM6 783 aa17.33■□□□□ 0.37
SPTBN1-205ENST00000496323 SPG7Q9UQ90 795 aa17.33■□□□□ 0.37
SPTBN1-205ENST00000496323 NECTIN2Q92692 538 aa17.33■□□□□ 0.36
SPTBN1-205ENST00000496323 PLEKHG2Q9H7P9 1386 aa17.33■□□□□ 0.36
SPTBN1-205ENST00000496323 RGS3P49796 1198 aa17.32■□□□□ 0.36
SPTBN1-205ENST00000496323 MYT1Q01538 1121 aa17.32■□□□□ 0.36
SPTBN1-205ENST00000496323 KDM6AO15550 1401 aaPredicted RBP17.32■□□□□ 0.36
SPTBN1-205ENST00000496323 STK31Q9BXU1 1019 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms