RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 CLP1Q92989 425 aaKnown RBP9.56□□□□□ -0.88
SSR3-208ENST00000496050 CDK15Q96Q40 435 aa9.56□□□□□ -0.88
SSR3-208ENST00000496050 DHX9Q08211 1270 aaKnown RBP9.55□□□□□ -0.88
SSR3-208ENST00000496050 FAM69CQ0P6D2 419 aa9.55□□□□□ -0.88
SSR3-208ENST00000496050 INTS6LQ5JSJ4 861 aaKnown RBP9.55□□□□□ -0.88
SSR3-208ENST00000496050 LIAT1Q6ZQX7 453 aa9.55□□□□□ -0.88
SSR3-208ENST00000496050 ERVH48-1M5A8F1 160 aa9.54□□□□□ -0.88
SSR3-208ENST00000496050 SSFA2P28290 1259 aa9.54□□□□□ -0.88
SSR3-208ENST00000496050 ARID4AP29374 1257 aaPredicted RBP9.54□□□□□ -0.88
SSR3-208ENST00000496050 CCER1Q8TC90 406 aaPredicted RBP9.54□□□□□ -0.88
SSR3-208ENST00000496050 SLC19A1P41440 591 aa9.53□□□□□ -0.88
SSR3-208ENST00000496050 IFFO2Q5TF58 517 aa9.53□□□□□ -0.88
SSR3-208ENST00000496050 TPCN2Q8NHX9 752 aa9.53□□□□□ -0.88
SSR3-208ENST00000496050 GNEQ9Y223 722 aaKnown RBP9.53□□□□□ -0.88
SSR3-208ENST00000496050 IVNS1ABPQ9Y6Y0 642 aa9.53□□□□□ -0.88
SSR3-208ENST00000496050 DKK1O94907 266 aa9.52□□□□□ -0.89
SSR3-208ENST00000496050 GRM5P41594 1212 aa9.52□□□□□ -0.89
SSR3-208ENST00000496050 KIAA1024Q9UPX6 916 aa9.52□□□□□ -0.89
SSR3-208ENST00000496050 SIAH2O43255 324 aa9.51□□□□□ -0.89
SSR3-208ENST00000496050 ATP2B4P23634 1241 aa9.51□□□□□ -0.89
SSR3-208ENST00000496050 CC2D2BQ6DHV5 1058 aa9.51□□□□□ -0.89
SSR3-208ENST00000496050 SFI1A8K8P3 1242 aa9.5□□□□□ -0.89
SSR3-208ENST00000496050 WNT7AO00755 349 aa9.5□□□□□ -0.89
SSR3-208ENST00000496050 NR5A1Q13285 461 aa9.5□□□□□ -0.89
SSR3-208ENST00000496050 HINFPQ9BQA5 517 aa9.5□□□□□ -0.89
SSR3-208ENST00000496050 ERVK-9P63128 1117 aa9.49□□□□□ -0.89
SSR3-208ENST00000496050 PHLDB3Q6NSJ2 640 aa9.49□□□□□ -0.89
SSR3-208ENST00000496050 M0R2N6 131 aa9.48□□□□□ -0.89
SSR3-208ENST00000496050 FSHRP23945 695 aa9.48□□□□□ -0.89
SSR3-208ENST00000496050 SCTRP47872 440 aa9.48□□□□□ -0.89
SSR3-208ENST00000496050 MMRN1Q13201 1228 aa9.48□□□□□ -0.89
SSR3-208ENST00000496050 TXNDC2Q86VQ3 553 aa9.48□□□□□ -0.89
SSR3-208ENST00000496050 MTMR7Q9Y216 660 aa9.48□□□□□ -0.89
SSR3-208ENST00000496050 ADH1CP00326 375 aa9.47□□□□□ -0.89
SSR3-208ENST00000496050 MFAP1P55081 439 aaKnown RBP9.47□□□□□ -0.89
SSR3-208ENST00000496050 MYT1Q01538 1121 aa9.47□□□□□ -0.89
SSR3-208ENST00000496050 CCDC116Q8IYX3 515 aa9.47□□□□□ -0.89
SSR3-208ENST00000496050 C1orf216Q8TAB5 229 aa9.47□□□□□ -0.89
SSR3-208ENST00000496050 MRGPRX2Q96LB1 330 aa9.47□□□□□ -0.89
SSR3-208ENST00000496050 TMPRSS4Q9NRS4 437 aa9.47□□□□□ -0.89
SSR3-208ENST00000496050 SLAIN2Q9P270 581 aa9.47□□□□□ -0.89
SSR3-208ENST00000496050 PRMT3O60678 531 aa9.46□□□□□ -0.9
SSR3-208ENST00000496050 PPP1R26Q5T8A7 1209 aaPredicted RBP9.46□□□□□ -0.9
SSR3-208ENST00000496050 SPRYD7Q5W111 196 aa9.46□□□□□ -0.9
SSR3-208ENST00000496050 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.46□□□□□ -0.9
SSR3-208ENST00000496050 EMID1Q96A84 441 aaPredicted RBP9.46□□□□□ -0.9
SSR3-208ENST00000496050 CYLDQ9NQC7 956 aa9.46□□□□□ -0.9
SSR3-208ENST00000496050 PGPEP1Q9NXJ5 209 aa9.46□□□□□ -0.9
SSR3-208ENST00000496050 BACH1O14867 736 aa9.45□□□□□ -0.9
SSR3-208ENST00000496050 SND1Q7KZF4 910 aaKnown RBP eCLIP9.45□□□□□ -0.93e-9■■■■■ 29
SSR3-208ENST00000496050 PRIMPOLQ96LW4 560 aa9.45□□□□□ -0.9
SSR3-208ENST00000496050 OSBPL3Q9H4L5 887 aa9.45□□□□□ -0.9
SSR3-208ENST00000496050 TLL2Q9Y6L7 1015 aa9.45□□□□□ -0.9
SSR3-208ENST00000496050 ZNF598Q86UK7 904 aaKnown RBP9.44□□□□□ -0.9
SSR3-208ENST00000496050 EMILIN1Q9Y6C2 1016 aa9.44□□□□□ -0.9
SSR3-208ENST00000496050 CCDC27Q2M243 656 aa9.43□□□□□ -0.9
SSR3-208ENST00000496050 TAS1R3Q7RTX0 852 aa9.43□□□□□ -0.9
SSR3-208ENST00000496050 ZNF784Q8NCA9 323 aaPredicted RBP9.43□□□□□ -0.9
SSR3-208ENST00000496050 ZNF358Q9NW07 568 aa9.43□□□□□ -0.9
SSR3-208ENST00000496050 CXXC1Q9P0U4 656 aaPredicted RBP9.43□□□□□ -0.9
SSR3-208ENST00000496050 LILRA1O75019 489 aa9.42□□□□□ -0.9
SSR3-208ENST00000496050 ALDH1A1P00352 501 aa9.42□□□□□ -0.9
SSR3-208ENST00000496050 GNRH1P01148 92 aa9.42□□□□□ -0.9
SSR3-208ENST00000496050 GDF10P55107 478 aa9.42□□□□□ -0.9
SSR3-208ENST00000496050 OCLNQ16625 522 aa9.42□□□□□ -0.9
SSR3-208ENST00000496050 ZNF697Q5TEC3 545 aa9.42□□□□□ -0.9
SSR3-208ENST00000496050 CYP2U1Q7Z449 544 aa9.42□□□□□ -0.9
SSR3-208ENST00000496050 TSEN2Q8NCE0 465 aaKnown RBP9.42□□□□□ -0.9
SSR3-208ENST00000496050 WASF2Q9Y6W5 498 aa9.42□□□□□ -0.9
SSR3-208ENST00000496050 TMEM229AB2RXF0 380 aa9.41□□□□□ -0.9
SSR3-208ENST00000496050 WASLO00401 505 aaPredicted RBP9.41□□□□□ -0.9
SSR3-208ENST00000496050 INHAP05111 366 aa9.41□□□□□ -0.9
SSR3-208ENST00000496050 WEE1P30291 646 aa9.41□□□□□ -0.9
SSR3-208ENST00000496050 ESCO1Q5FWF5 840 aa9.41□□□□□ -0.9
SSR3-208ENST00000496050 NPM2Q86SE8 214 aaKnown RBP9.41□□□□□ -0.9
SSR3-208ENST00000496050 FOXC1Q12948 553 aa9.4□□□□□ -0.9
SSR3-208ENST00000496050 RGS22Q8NE09 1264 aa9.4□□□□□ -0.9
SSR3-208ENST00000496050 SNIP1Q8TAD8 396 aaKnown RBP9.4□□□□□ -0.9
SSR3-208ENST00000496050 PLA2G2EQ9NZK7 142 aa9.4□□□□□ -0.9
SSR3-208ENST00000496050 NR3C2P08235 984 aa9.39□□□□□ -0.91
SSR3-208ENST00000496050 ADD1P35611 737 aaKnown RBP9.39□□□□□ -0.91
SSR3-208ENST00000496050 SCNN1DP51172 638 aa9.39□□□□□ -0.91
SSR3-208ENST00000496050 GAS2L2Q8NHY3 880 aa9.39□□□□□ -0.91
SSR3-208ENST00000496050 SLC4A9Q96Q91 983 aa9.39□□□□□ -0.91
SSR3-208ENST00000496050 V9GY48 417 aaPredicted RBP9.39□□□□□ -0.91
SSR3-208ENST00000496050 LGR5O75473 907 aa9.38□□□□□ -0.91
SSR3-208ENST00000496050 TNS4Q8IZW8 715 aa9.38□□□□□ -0.91
SSR3-208ENST00000496050 PRKD2Q9BZL6 878 aa9.38□□□□□ -0.91
SSR3-208ENST00000496050 SERTAD1Q9UHV2 236 aa9.38□□□□□ -0.91
SSR3-208ENST00000496050 ATAD2Q6PL18 1390 aa9.37□□□□□ -0.91
SSR3-208ENST00000496050 A0A0G2JS52 829 aa9.37□□□□□ -0.91
SSR3-208ENST00000496050 PTCD1O75127 700 aaKnown RBP9.37□□□□□ -0.91
SSR3-208ENST00000496050 IGFBP4P22692 258 aa9.37□□□□□ -0.91
SSR3-208ENST00000496050 NNTQ13423 1086 aa9.37□□□□□ -0.91
SSR3-208ENST00000496050 ETNK1Q9HBU6 452 aa9.37□□□□□ -0.91
SSR3-208ENST00000496050 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.37□□□□□ -0.91
SSR3-208ENST00000496050 PKD2L1Q9P0L9 805 aa9.37□□□□□ -0.91
SSR3-208ENST00000496050 TTC24A2A3L6 582 aaPredicted RBP9.36□□□□□ -0.91
SSR3-208ENST00000496050 SOWAHDA6NJG2 315 aa9.36□□□□□ -0.91
SSR3-208ENST00000496050 SERPINB4P48594 390 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms