RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 PER1O15534 1290 aaPredicted RBP23.99■■□□□ 1.43
HDAC4-211ENST00000494800 KCNQ2O43526 872 aa23.99■■□□□ 1.43
HDAC4-211ENST00000494800 EIF4A2Q14240 407 aaKnown RBP23.99■■□□□ 1.43
HDAC4-211ENST00000494800 PTF1AQ7RTS3 328 aa23.99■■□□□ 1.43
HDAC4-211ENST00000494800 PCDH11XQ9BZA7 1347 aa23.99■■□□□ 1.43
HDAC4-211ENST00000494800 PCDH11YQ9BZA8 1340 aa23.99■■□□□ 1.43
HDAC4-211ENST00000494800 NHSQ6T4R5 1651 aa23.99■■□□□ 1.43
HDAC4-211ENST00000494800 PSDA5PKW4 1024 aaPredicted RBP23.98■■□□□ 1.43
HDAC4-211ENST00000494800 EYA1Q99502 592 aa23.98■■□□□ 1.43
HDAC4-211ENST00000494800 RREB1Q92766 1687 aa23.98■■□□□ 1.43
HDAC4-211ENST00000494800 R3HDM1Q15032 1099 aaKnown RBP23.97■■□□□ 1.43
HDAC4-211ENST00000494800 CC2D1BQ5T0F9 858 aaKnown RBP23.97■■□□□ 1.43
HDAC4-211ENST00000494800 NCAPD2Q15021 1401 aa23.96■■□□□ 1.43
HDAC4-211ENST00000494800 SYTL4Q96C24 671 aaPredicted RBP23.96■■□□□ 1.43
HDAC4-211ENST00000494800 SPG7Q9UQ90 795 aa23.96■■□□□ 1.43
HDAC4-211ENST00000494800 NPC1L1Q9UHC9 1359 aa23.94■■□□□ 1.42
HDAC4-211ENST00000494800 NUP188Q5SRE5 1749 aa23.93■■□□□ 1.42
HDAC4-211ENST00000494800 TXNRD1Q16881 649 aa23.92■■□□□ 1.42
HDAC4-211ENST00000494800 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.92■■□□□ 1.42
HDAC4-211ENST00000494800 PLEKHG2Q9H7P9 1386 aa23.91■■□□□ 1.42
HDAC4-211ENST00000494800 IGSF1Q8N6C5 1336 aa23.91■■□□□ 1.42
HDAC4-211ENST00000494800 PRIM1P49642 420 aaKnown RBP23.91■■□□□ 1.42
HDAC4-211ENST00000494800 SHANK3Q9BYB0 1731 aa23.9■■□□□ 1.42
HDAC4-211ENST00000494800 MTHFSP49914 203 aa23.89■■□□□ 1.41
HDAC4-211ENST00000494800 CNGB1Q14028 1251 aaPredicted RBP23.89■■□□□ 1.41
HDAC4-211ENST00000494800 PROM2Q8N271 834 aa23.88■■□□□ 1.41
HDAC4-211ENST00000494800 CYP27B1O15528 508 aa23.87■■□□□ 1.41
HDAC4-211ENST00000494800 DOT1LQ8TEK3 1739 aa23.87■■□□□ 1.41
HDAC4-211ENST00000494800 BTAF1O14981 1849 aa23.87■■□□□ 1.41
HDAC4-211ENST00000494800 STK32BQ9NY57 414 aa23.86■■□□□ 1.41
HDAC4-211ENST00000494800 PKD1L3Q7Z443 1732 aa23.86■■□□□ 1.41
HDAC4-211ENST00000494800 IFNL2Q8IZJ0 200 aa23.85■■□□□ 1.41
HDAC4-211ENST00000494800 IL13P35225 146 aa23.84■■□□□ 1.41
HDAC4-211ENST00000494800 SLC27A3Q5K4L6 730 aa23.84■■□□□ 1.41
HDAC4-211ENST00000494800 AMOTQ4VCS5 1084 aa23.83■■□□□ 1.41
HDAC4-211ENST00000494800 PLEKHO1Q53GL0 409 aaPredicted RBP23.83■■□□□ 1.41
HDAC4-211ENST00000494800 KAT6BQ8WYB5 2073 aa23.83■■□□□ 1.41
HDAC4-211ENST00000494800 NKX1-1Q15270 411 aaPredicted RBP23.82■■□□□ 1.4
HDAC4-211ENST00000494800 SULT6B1Q6IMI4 303 aa23.82■■□□□ 1.4
HDAC4-211ENST00000494800 DIAPH1O60610 1272 aaKnown RBP23.81■■□□□ 1.4
HDAC4-211ENST00000494800 HMGB2P26583 209 aaKnown RBP23.81■■□□□ 1.4
HDAC4-211ENST00000494800 ANO8Q9HCE9 1232 aaPredicted RBP23.81■■□□□ 1.4
HDAC4-211ENST00000494800 HSP90AB1P08238 724 aaKnown RBP23.8■■□□□ 1.4
HDAC4-211ENST00000494800 PHKG2P15735 406 aa23.8■■□□□ 1.4
HDAC4-211ENST00000494800 MPRIPQ6WCQ1 1025 aa23.8■■□□□ 1.4
HDAC4-211ENST00000494800 LRP5O75197 1615 aa23.8■■□□□ 1.4
HDAC4-211ENST00000494800 SLC15A2Q16348 729 aa23.79■■□□□ 1.4
HDAC4-211ENST00000494800 AEBP1Q8IUX7 1158 aa23.78■■□□□ 1.4
HDAC4-211ENST00000494800 CFAP53Q96M91 514 aa23.78■■□□□ 1.4
HDAC4-211ENST00000494800 SRCAPQ6ZRS2 3230 aa23.78■■□□□ 1.4
HDAC4-211ENST00000494800 KDRP35968 1356 aa23.78■■□□□ 1.4
HDAC4-211ENST00000494800 ZEB1P37275 1124 aaPredicted RBP23.77■■□□□ 1.4
HDAC4-211ENST00000494800 C1orf141Q5JVX7 400 aa23.76■■□□□ 1.39
HDAC4-211ENST00000494800 ZNF530Q6P9A1 599 aaPredicted RBP23.76■■□□□ 1.39
HDAC4-211ENST00000494800 SMARCC1Q92922 1105 aaPredicted RBP23.76■■□□□ 1.39
HDAC4-211ENST00000494800 TMOD3Q9NYL9 352 aa23.76■■□□□ 1.39
HDAC4-211ENST00000494800 CCNL1Q9UK58 526 aaPredicted RBP23.76■■□□□ 1.39
HDAC4-211ENST00000494800 LRRC4BQ9NT99 713 aa23.75■■□□□ 1.39
HDAC4-211ENST00000494800 DCAF5Q96JK2 942 aa23.74■■□□□ 1.39
HDAC4-211ENST00000494800 SPON1Q9HCB6 807 aa23.74■■□□□ 1.39
HDAC4-211ENST00000494800 PALLDQ8WX93 1383 aa23.73■■□□□ 1.39
HDAC4-211ENST00000494800 HMOX1P09601 288 aa23.72■■□□□ 1.39
HDAC4-211ENST00000494800 PIGBQ92521 554 aa23.72■■□□□ 1.39
HDAC4-211ENST00000494800 ERVV-2B6SEH9 535 aa23.71■■□□□ 1.39
HDAC4-211ENST00000494800 U2SURPO15042 1029 aaKnown RBP23.71■■□□□ 1.39
HDAC4-211ENST00000494800 TOGARAM1Q9Y4F4 1720 aa23.7■■□□□ 1.39
HDAC4-211ENST00000494800 PAPPAQ13219 1627 aa23.7■■□□□ 1.39
HDAC4-211ENST00000494800 LY75O60449 1722 aa23.7■■□□□ 1.38
HDAC4-211ENST00000494800 PPP2R1AP30153 589 aa23.69■■□□□ 1.38
HDAC4-211ENST00000494800 TFCP2L1Q9NZI6 479 aa23.69■■□□□ 1.38
HDAC4-211ENST00000494800 NUDCQ9Y266 331 aa23.69■■□□□ 1.38
HDAC4-211ENST00000494800 KCNQ4P56696 695 aa23.68■■□□□ 1.38
HDAC4-211ENST00000494800 ZNF827Q17R98 1081 aa23.68■■□□□ 1.38
HDAC4-211ENST00000494800 AKT1S1Q96B36 256 aa23.68■■□□□ 1.38
HDAC4-211ENST00000494800 PPP1R1BQ9UD71 204 aaPredicted RBP23.68■■□□□ 1.38
HDAC4-211ENST00000494800 COL3A1P02461 1466 aaPredicted RBP23.68■■□□□ 1.38
HDAC4-211ENST00000494800 CABP4P57796 275 aa23.67■■□□□ 1.38
HDAC4-211ENST00000494800 ITGB4P16144 1822 aa23.66■■□□□ 1.38
HDAC4-211ENST00000494800 AKAP4Q5JQC9 854 aa23.66■■□□□ 1.38
HDAC4-211ENST00000494800 ZBTB7AO95365 584 aa23.65■■□□□ 1.38
HDAC4-211ENST00000494800 CASZ1Q86V15 1759 aa23.65■■□□□ 1.38
HDAC4-211ENST00000494800 PDGFDQ9GZP0 370 aaPredicted RBP23.64■■□□□ 1.37
HDAC4-211ENST00000494800 MTFR1LQ9H019 292 aa23.64■■□□□ 1.37
HDAC4-211ENST00000494800 KDM6AO15550 1401 aaPredicted RBP23.63■■□□□ 1.37
HDAC4-211ENST00000494800 LOC102724428A0A0B4J2F2 783 aa23.62■■□□□ 1.37
HDAC4-211ENST00000494800 SIK1P57059 783 aa23.62■■□□□ 1.37
HDAC4-211ENST00000494800 DDX10Q13206 875 aaKnown RBP23.62■■□□□ 1.37
HDAC4-211ENST00000494800 ASAP1Q9ULH1 1129 aa23.62■■□□□ 1.37
HDAC4-211ENST00000494800 SLC16A10Q8TF71 515 aa23.61■■□□□ 1.37
HDAC4-211ENST00000494800 ATG3Q9NT62 314 aa23.6■■□□□ 1.37
HDAC4-211ENST00000494800 ATF5Q9Y2D1 282 aaPredicted RBP23.6■■□□□ 1.37
HDAC4-211ENST00000494800 U2AF1L5P0DN76 240 aaPredicted RBP23.59■■□□□ 1.37
HDAC4-211ENST00000494800 U2AF1Q01081 240 aaKnown RBP eCLIP23.59■■□□□ 1.37
HDAC4-211ENST00000494800 MTHFSDQ2M296 383 aaKnown RBP23.59■■□□□ 1.37
HDAC4-211ENST00000494800 GAS2L2Q8NHY3 880 aa23.59■■□□□ 1.37
HDAC4-211ENST00000494800 AK7Q96M32 723 aa23.59■■□□□ 1.37
HDAC4-211ENST00000494800 PNPLA7Q6ZV29 1317 aa23.59■■□□□ 1.37
HDAC4-211ENST00000494800 C5P01031 1676 aa23.58■■□□□ 1.37
HDAC4-211ENST00000494800 MSH5O43196 834 aa23.58■■□□□ 1.37
HDAC4-211ENST00000494800 ATP6V1AP38606 617 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms