RNA–Protein interactions for RNA: ENST00000494742.5

PCCB-219, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 547 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-219ENST00000494742 CGNL1Q0VF96 1302 aa20.54■□□□□ 0.88
PCCB-219ENST00000494742 PRIM1P49642 420 aaKnown RBP20.54■□□□□ 0.88
PCCB-219ENST00000494742 ZNF784Q8NCA9 323 aaPredicted RBP20.53■□□□□ 0.88
PCCB-219ENST00000494742 NSD2O96028 1365 aa20.52■□□□□ 0.88
PCCB-219ENST00000494742 POLD1P28340 1107 aa20.52■□□□□ 0.88
PCCB-219ENST00000494742 SYTL4Q96C24 671 aaPredicted RBP20.52■□□□□ 0.88
PCCB-219ENST00000494742 MEGF6O75095 1541 aa20.52■□□□□ 0.87
PCCB-219ENST00000494742 PNPLA7Q6ZV29 1317 aa20.52■□□□□ 0.87
PCCB-219ENST00000494742 TUBGCP6Q96RT7 1819 aa20.51■□□□□ 0.87
PCCB-219ENST00000494742 TFCP2L1Q9NZI6 479 aa20.51■□□□□ 0.87
PCCB-219ENST00000494742 UTRNP46939 3433 aa20.51■□□□□ 0.87
PCCB-219ENST00000494742 SMG6Q86US8 1419 aaKnown RBP20.51■□□□□ 0.87
PCCB-219ENST00000494742 FYB1O15117 783 aa20.5■□□□□ 0.87
PCCB-219ENST00000494742 FBLN1P23142 703 aa20.5■□□□□ 0.87
PCCB-219ENST00000494742 HMGB2P26583 209 aaKnown RBP20.5■□□□□ 0.87
PCCB-219ENST00000494742 TMF1P82094 1093 aa20.5■□□□□ 0.87
PCCB-219ENST00000494742 KIF24Q5T7B8 1368 aa20.49■□□□□ 0.87
PCCB-219ENST00000494742 NBPF6Q5VWK0 638 aa20.48■□□□□ 0.87
PCCB-219ENST00000494742 NBPF4Q96M43 638 aa20.48■□□□□ 0.87
PCCB-219ENST00000494742 CDCA8Q53HL2 280 aa20.47■□□□□ 0.87
PCCB-219ENST00000494742 RAPGEF4Q8WZA2 1011 aa20.47■□□□□ 0.87
PCCB-219ENST00000494742 KIF20BQ96Q89 1820 aa20.47■□□□□ 0.87
PCCB-219ENST00000494742 INSRP06213 1382 aa20.46■□□□□ 0.87
PCCB-219ENST00000494742 USP47Q96K76 1375 aa20.46■□□□□ 0.87
PCCB-219ENST00000494742 RRS1Q15050 365 aaKnown RBP20.46■□□□□ 0.87
PCCB-219ENST00000494742 CCNL1Q9UK58 526 aaPredicted RBP20.46■□□□□ 0.87
PCCB-219ENST00000494742 GPR162Q16538 588 aa20.45■□□□□ 0.86
PCCB-219ENST00000494742 GGNBP2Q9H3C7 697 aa20.45■□□□□ 0.86
PCCB-219ENST00000494742 TATP17735 454 aaPredicted RBP20.44■□□□□ 0.86
PCCB-219ENST00000494742 KCNQ4P56696 695 aa20.44■□□□□ 0.86
PCCB-219ENST00000494742 FLT4P35916 1363 aa20.44■□□□□ 0.86
PCCB-219ENST00000494742 PCDH11XQ9BZA7 1347 aa20.43■□□□□ 0.86
PCCB-219ENST00000494742 PCDH11YQ9BZA8 1340 aa20.43■□□□□ 0.86
PCCB-219ENST00000494742 C5P01031 1676 aa20.42■□□□□ 0.86
PCCB-219ENST00000494742 KLHL34Q8N239 644 aa20.41■□□□□ 0.86
PCCB-219ENST00000494742 HSP90AB2PQ58FF8 381 aa20.4■□□□□ 0.86
PCCB-219ENST00000494742 USHBP1Q8N6Y0 703 aa20.4■□□□□ 0.86
PCCB-219ENST00000494742 COL23A1Q86Y22 540 aaPredicted RBP20.39■□□□□ 0.85
PCCB-219ENST00000494742 FLAD1Q8NFF5 587 aa20.39■□□□□ 0.85
PCCB-219ENST00000494742 TAF1LQ8IZX4 1826 aa20.39■□□□□ 0.85
PCCB-219ENST00000494742 PKD1L3Q7Z443 1732 aa20.38■□□□□ 0.85
PCCB-219ENST00000494742 MSH5O43196 834 aa20.37■□□□□ 0.85
PCCB-219ENST00000494742 ANKRD26Q9UPS8 1709 aa20.36■□□□□ 0.85
PCCB-219ENST00000494742 PALLDQ8WX93 1383 aa20.36■□□□□ 0.85
PCCB-219ENST00000494742 GRIN3BO60391 1043 aa20.36■□□□□ 0.85
PCCB-219ENST00000494742 C1QTNF8P60827 252 aa20.36■□□□□ 0.85
PCCB-219ENST00000494742 NLGN2Q8NFZ4 835 aa20.36■□□□□ 0.85
PCCB-219ENST00000494742 ITGB4P16144 1822 aa20.36■□□□□ 0.85
PCCB-219ENST00000494742 NCAPD2Q15021 1401 aa20.36■□□□□ 0.85
PCCB-219ENST00000494742 PELP1Q8IZL8 1130 aaKnown RBP20.35■□□□□ 0.85
PCCB-219ENST00000494742 SMARCC1Q92922 1105 aaPredicted RBP20.35■□□□□ 0.85
PCCB-219ENST00000494742 CYP27B1O15528 508 aa20.34■□□□□ 0.85
PCCB-219ENST00000494742 MPRIPQ6WCQ1 1025 aa20.34■□□□□ 0.85
PCCB-219ENST00000494742 CARD14Q9BXL6 1004 aa20.34■□□□□ 0.85
PCCB-219ENST00000494742 TOGARAM1Q9Y4F4 1720 aa20.33■□□□□ 0.85
PCCB-219ENST00000494742 TIMELESSQ9UNS1 1208 aa20.33■□□□□ 0.85
PCCB-219ENST00000494742 C4BP0C0L5 1744 aa20.33■□□□□ 0.84
PCCB-219ENST00000494742 NKX1-1Q15270 411 aaPredicted RBP20.32■□□□□ 0.84
PCCB-219ENST00000494742 CD2APQ9Y5K6 639 aa20.32■□□□□ 0.84
PCCB-219ENST00000494742 NSD3Q9BZ95 1437 aa20.32■□□□□ 0.84
PCCB-219ENST00000494742 TRIM26Q12899 539 aaPredicted RBP20.31■□□□□ 0.84
PCCB-219ENST00000494742 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.31■□□□□ 0.84
PCCB-219ENST00000494742 SPG7Q9UQ90 795 aa20.31■□□□□ 0.84
PCCB-219ENST00000494742 EMILIN1Q9Y6C2 1016 aa20.31■□□□□ 0.84
PCCB-219ENST00000494742 GOLGB1Q14789 3259 aaKnown RBP20.31■□□□□ 0.84
PCCB-219ENST00000494742 WASHC2AQ641Q2 1341 aa20.3■□□□□ 0.84
PCCB-219ENST00000494742 MAP2P11137 1827 aaKnown RBP20.3■□□□□ 0.84
PCCB-219ENST00000494742 SENP3-EIF4A1A0A087X0R7 540 aa20.29■□□□□ 0.84
PCCB-219ENST00000494742 GIGYF1O75420 1035 aaPredicted RBP20.29■□□□□ 0.84
PCCB-219ENST00000494742 YBX3P16989 372 aaKnown RBP eCLIP20.29■□□□□ 0.84
PCCB-219ENST00000494742 MSL1Q68DK7 614 aa20.29■□□□□ 0.84
PCCB-219ENST00000494742 UBR3Q6ZT12 1888 aa20.28■□□□□ 0.84
PCCB-219ENST00000494742 AK7Q96M32 723 aa20.28■□□□□ 0.84
PCCB-219ENST00000494742 PLEKHG2Q9H7P9 1386 aa20.28■□□□□ 0.84
PCCB-219ENST00000494742 PIGBQ92521 554 aa20.27■□□□□ 0.84
PCCB-219ENST00000494742 PPM1GO15355 546 aaPredicted RBP20.26■□□□□ 0.83
PCCB-219ENST00000494742 SSFA2P28290 1259 aa20.24■□□□□ 0.83
PCCB-219ENST00000494742 EYA1Q99502 592 aa20.24■□□□□ 0.83
PCCB-219ENST00000494742 LOC102724428A0A0B4J2F2 783 aa20.23■□□□□ 0.83
PCCB-219ENST00000494742 SIK1P57059 783 aa20.23■□□□□ 0.83
PCCB-219ENST00000494742 IFNL2Q8IZJ0 200 aa20.23■□□□□ 0.83
PCCB-219ENST00000494742 TMOD3Q9NYL9 352 aa20.23■□□□□ 0.83
PCCB-219ENST00000494742 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.22■□□□□ 0.83
PCCB-219ENST00000494742 POLKQ9UBT6 870 aa20.22■□□□□ 0.83
PCCB-219ENST00000494742 CLSPNQ9HAW4 1339 aa20.22■□□□□ 0.83
PCCB-219ENST00000494742 PHKG2P15735 406 aa20.21■□□□□ 0.83
PCCB-219ENST00000494742 AMIGO3Q86WK7 504 aa20.2■□□□□ 0.82
PCCB-219ENST00000494742 PHF14O94880 888 aa20.19■□□□□ 0.82
PCCB-219ENST00000494742 LINC00116Q8NCU8 138 aa20.19■□□□□ 0.82
PCCB-219ENST00000494742 ZNF831Q5JPB2 1677 aa20.19■□□□□ 0.82
PCCB-219ENST00000494742 ASAP1Q9ULH1 1129 aa20.18■□□□□ 0.82
PCCB-219ENST00000494742 ATP10DQ9P241 1426 aa20.18■□□□□ 0.82
PCCB-219ENST00000494742 ATP6V1AP38606 617 aa20.17■□□□□ 0.82
PCCB-219ENST00000494742 EIF4A2Q14240 407 aaKnown RBP20.17■□□□□ 0.82
PCCB-219ENST00000494742 ITPK1Q13572 414 aa20.16■□□□□ 0.82
PCCB-219ENST00000494742 IGSF1Q8N6C5 1336 aa20.16■□□□□ 0.82
PCCB-219ENST00000494742 ADCY9O60503 1353 aa20.16■□□□□ 0.82
PCCB-219ENST00000494742 ERVV-2B6SEH9 535 aa20.15■□□□□ 0.82
PCCB-219ENST00000494742 GNPATO15228 680 aa20.15■□□□□ 0.82
PCCB-219ENST00000494742 ATG3Q9NT62 314 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms