RNA–Protein interactions for RNA: ENST00000494397.5

ARHGAP4-223, Transcript of Rho GTPase activating protein 4, human

TSL 5

Gene ARHGAP4, Length 1,752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGAP4-223	ENST00000494397	KIAA0232	Q92628	1395 aa		28.75	■■■□□ 2.19
ARHGAP4-223	ENST00000494397	MRPL50	Q8N5N7	158 aa	Known RBP	28.75	■■■□□ 2.19
ARHGAP4-223	ENST00000494397	ARHGAP45	Q92619	1136 aa		28.75	■■■□□ 2.19
ARHGAP4-223	ENST00000494397	DDX19B	Q9UMR2	479 aa		28.75	■■■□□ 2.19
ARHGAP4-223	ENST00000494397	LMOD2	Q6P5Q4	547 aa		28.73	■■■□□ 2.19
ARHGAP4-223	ENST00000494397	IGHD	P01880	384 aa		28.73	■■■□□ 2.19
ARHGAP4-223	ENST00000494397	ELL2	O00472	640 aa	Predicted RBP	28.7	■■■□□ 2.19
ARHGAP4-223	ENST00000494397	ALS2	Q96Q42	1657 aa		28.7	■■■□□ 2.18
ARHGAP4-223	ENST00000494397	NPHP3	Q7Z494	1330 aa		28.7	■■■□□ 2.18
ARHGAP4-223	ENST00000494397	GNAT3	A8MTJ3	354 aa		28.7	■■■□□ 2.18
ARHGAP4-223	ENST00000494397	PCDHB15	Q9Y5E8	787 aa		28.7	■■■□□ 2.18
ARHGAP4-223	ENST00000494397	STRC	Q7RTU9	1775 aa		28.69	■■■□□ 2.18
ARHGAP4-223	ENST00000494397	NBPF6	Q5VWK0	638 aa		28.69	■■■□□ 2.18
ARHGAP4-223	ENST00000494397	ITPRIP	Q8IWB1	547 aa		28.69	■■■□□ 2.18
ARHGAP4-223	ENST00000494397	NBPF4	Q96M43	638 aa		28.69	■■■□□ 2.18
ARHGAP4-223	ENST00000494397	MAP3K5	Q99683	1374 aa		28.69	■■■□□ 2.18
ARHGAP4-223	ENST00000494397	TMEM57	Q8N5G2	664 aa		28.68	■■■□□ 2.18
ARHGAP4-223	ENST00000494397	ZBTB7C	A1YPR0	619 aa		28.67	■■■□□ 2.18
ARHGAP4-223	ENST00000494397	LRRC37A3	O60309	1634 aa		28.66	■■■□□ 2.18
ARHGAP4-223	ENST00000494397	NCAPD2	Q15021	1401 aa		28.66	■■■□□ 2.18
ARHGAP4-223	ENST00000494397	USHBP1	Q8N6Y0	703 aa		28.66	■■■□□ 2.18
ARHGAP4-223	ENST00000494397	RWDD1	Q9H446	243 aa	Predicted RBP	28.66	■■■□□ 2.18
ARHGAP4-223	ENST00000494397	SKAP1	Q86WV1	359 aa		28.65	■■■□□ 2.18
ARHGAP4-223	ENST00000494397	TSPYL4	Q9UJ04	414 aa		28.64	■■■□□ 2.18
ARHGAP4-223	ENST00000494397	MED1	Q15648	1581 aa	Predicted RBP	28.63	■■■□□ 2.17
ARHGAP4-223	ENST00000494397	PDE4A	P27815	886 aa		28.63	■■■□□ 2.17
ARHGAP4-223	ENST00000494397	API5	Q9BZZ5	524 aa	Known RBP	28.63	■■■□□ 2.17
ARHGAP4-223	ENST00000494397	BABAM1	Q9NWV8	329 aa		28.63	■■■□□ 2.17
ARHGAP4-223	ENST00000494397	TNS3	Q68CZ2	1445 aa		28.63	■■■□□ 2.17
ARHGAP4-223	ENST00000494397	CHMP4B	Q9H444	224 aa	Known RBP	28.62	■■■□□ 2.17
ARHGAP4-223	ENST00000494397	BACH2	Q9BYV9	841 aa		28.62	■■■□□ 2.17
ARHGAP4-223	ENST00000494397	ABCC4	O15439	1325 aa		28.62	■■■□□ 2.17
ARHGAP4-223	ENST00000494397	PXDN	Q92626	1479 aa		28.61	■■■□□ 2.17
ARHGAP4-223	ENST00000494397	ANKRD24	Q8TF21	1146 aa		28.61	■■■□□ 2.17
ARHGAP4-223	ENST00000494397	ZBTB40	Q9NUA8	1239 aa		28.61	■■■□□ 2.17
ARHGAP4-223	ENST00000494397	XIRP1	Q702N8	1843 aa	Known RBP	28.59	■■■□□ 2.17
ARHGAP4-223	ENST00000494397	KRT24	Q2M2I5	525 aa		28.59	■■■□□ 2.17
ARHGAP4-223	ENST00000494397	DDX17	Q92841	729 aa	Known RBP	28.59	■■■□□ 2.17
ARHGAP4-223	ENST00000494397	LRRC59	Q96AG4	307 aa	Known RBP	28.59	■■■□□ 2.17
ARHGAP4-223	ENST00000494397	IL17RE	Q8NFR9	667 aa		28.58	■■■□□ 2.17
ARHGAP4-223	ENST00000494397	PLEKHG5	O94827	1062 aa		28.57	■■■□□ 2.16
ARHGAP4-223	ENST00000494397	HDAC1	Q13547	482 aa	Predicted RBP	28.57	■■■□□ 2.16
ARHGAP4-223	ENST00000494397	CAMTA1	Q9Y6Y1	1673 aa		28.57	■■■□□ 2.16
ARHGAP4-223	ENST00000494397	SPATA31A3	Q5VYP0	1347 aa		28.57	■■■□□ 2.16
ARHGAP4-223	ENST00000494397	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	28.57	■■■□□ 2.16
ARHGAP4-223	ENST00000494397	AMOT	Q4VCS5	1084 aa		28.57	■■■□□ 2.16
ARHGAP4-223	ENST00000494397	MIS18A	Q9NYP9	233 aa		28.57	■■■□□ 2.16
ARHGAP4-223	ENST00000494397	AXIN2	Q9Y2T1	843 aa		28.56	■■■□□ 2.16
ARHGAP4-223	ENST00000494397	CEMIP	Q8WUJ3	1361 aa		28.55	■■■□□ 2.16
ARHGAP4-223	ENST00000494397	SOS1	Q07889	1333 aa	Predicted RBP	28.55	■■■□□ 2.16
ARHGAP4-223	ENST00000494397	PLEKHO1	Q53GL0	409 aa	Predicted RBP	28.55	■■■□□ 2.16
ARHGAP4-223	ENST00000494397	TAF7	Q15545	349 aa	Predicted RBP	28.55	■■■□□ 2.16
ARHGAP4-223	ENST00000494397	BRINP3	Q76B58	766 aa		28.55	■■■□□ 2.16
ARHGAP4-223	ENST00000494397	ERBB3	P21860	1342 aa		28.54	■■■□□ 2.16
ARHGAP4-223	ENST00000494397	ABCC6	O95255	1503 aa		28.54	■■■□□ 2.16
ARHGAP4-223	ENST00000494397	RGS3	P49796	1198 aa		28.53	■■■□□ 2.16
ARHGAP4-223	ENST00000494397	ZC3H6	P61129	1189 aa	Known RBP	28.53	■■■□□ 2.16
ARHGAP4-223	ENST00000494397	PTPRC	P08575	1304 aa		28.53	■■■□□ 2.16
ARHGAP4-223	ENST00000494397	ZBTB7B	O15156	539 aa	Predicted RBP	28.52	■■■□□ 2.16
ARHGAP4-223	ENST00000494397	AKAP4	Q5JQC9	854 aa		28.52	■■■□□ 2.16
ARHGAP4-223	ENST00000494397	ZNF530	Q6P9A1	599 aa	Predicted RBP	28.5	■■■□□ 2.15
ARHGAP4-223	ENST00000494397	SLAIN2	Q9P270	581 aa		28.5	■■■□□ 2.15
ARHGAP4-223	ENST00000494397	LMO7	Q8WWI1	1683 aa		28.49	■■■□□ 2.15
ARHGAP4-223	ENST00000494397	FAM161A	Q3B820	660 aa		28.49	■■■□□ 2.15
ARHGAP4-223	ENST00000494397	RGPD2	P0DJD1	1756 aa		28.48	■■■□□ 2.15
ARHGAP4-223	ENST00000494397	RGS12	O14924	1447 aa		28.48	■■■□□ 2.15
ARHGAP4-223	ENST00000494397	CPD	O75976	1380 aa		28.47	■■■□□ 2.15
ARHGAP4-223	ENST00000494397	INTS3	Q68E01	1043 aa	Known RBP	28.47	■■■□□ 2.15
ARHGAP4-223	ENST00000494397	OVOS2	A0A0G2JMS6	1433 aa		28.47	■■■□□ 2.15
ARHGAP4-223	ENST00000494397	PDZRN3	Q9UPQ7	1066 aa		28.47	■■■□□ 2.15
ARHGAP4-223	ENST00000494397	SLC4A2	P04920	1241 aa		28.45	■■■□□ 2.15
ARHGAP4-223	ENST00000494397	SOS2	Q07890	1332 aa	Predicted RBP	28.45	■■■□□ 2.14
ARHGAP4-223	ENST00000494397	ANP32A	P39687	249 aa	Known RBP	28.45	■■■□□ 2.14
ARHGAP4-223	ENST00000494397	CRYBG1	Q9Y4K1	1723 aa		28.44	■■■□□ 2.14
ARHGAP4-223	ENST00000494397	C1orf141	Q5JVX7	400 aa		28.44	■■■□□ 2.14
ARHGAP4-223	ENST00000494397	SMC5	Q8IY18	1101 aa		28.44	■■■□□ 2.14
ARHGAP4-223	ENST00000494397	PLEKHG2	Q9H7P9	1386 aa		28.43	■■■□□ 2.14
ARHGAP4-223	ENST00000494397	CABLES1	Q8TDN4	633 aa		28.43	■■■□□ 2.14
ARHGAP4-223	ENST00000494397	STK31	Q9BXU1	1019 aa		28.43	■■■□□ 2.14
ARHGAP4-223	ENST00000494397	COL18A1	P39060	1754 aa		28.42	■■■□□ 2.14
ARHGAP4-223	ENST00000494397	C8orf34	Q49A92	452 aa		28.42	■■■□□ 2.14
ARHGAP4-223	ENST00000494397	CCDC30	Q5VVM6	783 aa		28.42	■■■□□ 2.14
ARHGAP4-223	ENST00000494397	LGR6	Q9HBX8	967 aa		28.42	■■■□□ 2.14
ARHGAP4-223	ENST00000494397	NLRP2	Q9NX02	1062 aa		28.39	■■■□□ 2.14
ARHGAP4-223	ENST00000494397	RNMT	O43148	476 aa	Known RBP	28.39	■■■□□ 2.13
ARHGAP4-223	ENST00000494397	TEF	Q10587	303 aa		28.39	■■■□□ 2.13
ARHGAP4-223	ENST00000494397	RAPGEF4	Q8WZA2	1011 aa		28.38	■■■□□ 2.13
ARHGAP4-223	ENST00000494397	HOXB7	P09629	217 aa		28.37	■■■□□ 2.13
ARHGAP4-223	ENST00000494397	RGPD5	Q99666	1765 aa		28.37	■■■□□ 2.13
ARHGAP4-223	ENST00000494397	FAM208A	Q9UK61	1670 aa	Known RBP	28.37	■■■□□ 2.13
ARHGAP4-223	ENST00000494397	MPRIP	Q6WCQ1	1025 aa		28.37	■■■□□ 2.13
ARHGAP4-223	ENST00000494397	CHMP4A	Q9BY43	222 aa		28.37	■■■□□ 2.13
ARHGAP4-223	ENST00000494397	CSB-PGBD3	P0DP91	1061 aa		28.35	■■■□□ 2.13
ARHGAP4-223	ENST00000494397	EIF4A1	P60842	406 aa	Known RBP	28.35	■■■□□ 2.13
ARHGAP4-223	ENST00000494397	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	28.35	■■■□□ 2.13
ARHGAP4-223	ENST00000494397	MSH5	O43196	834 aa		28.34	■■■□□ 2.13
ARHGAP4-223	ENST00000494397	TAT	P17735	454 aa	Predicted RBP	28.34	■■■□□ 2.13
ARHGAP4-223	ENST00000494397	CHRNA2	Q15822	529 aa		28.34	■■■□□ 2.13
ARHGAP4-223	ENST00000494397	G2E3	Q7L622	706 aa		28.34	■■■□□ 2.13
ARHGAP4-223	ENST00000494397	GCC1	Q96CN9	775 aa		28.34	■■■□□ 2.13

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