RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 MORC1Q86VD1 984 aa20.14■□□□□ 0.81
ATG4B-224ENST00000494132 KCNQ2O43526 872 aa20.13■□□□□ 0.81
ATG4B-224ENST00000494132 BCL9O00512 1426 aa20.12■□□□□ 0.81
ATG4B-224ENST00000494132 AMER1Q5JTC6 1135 aaPredicted RBP20.11■□□□□ 0.81
ATG4B-224ENST00000494132 BCL11BQ9C0K0 894 aaPredicted RBP20.11■□□□□ 0.81
ATG4B-224ENST00000494132 CC2D1BQ5T0F9 858 aaKnown RBP20.1■□□□□ 0.81
ATG4B-224ENST00000494132 ZCRB1Q8TBF4 217 aaKnown RBP20.1■□□□□ 0.81
ATG4B-224ENST00000494132 RAPGEF4Q8WZA2 1011 aa20.1■□□□□ 0.81
ATG4B-224ENST00000494132 PKD1L3Q7Z443 1732 aa20.1■□□□□ 0.81
ATG4B-224ENST00000494132 PARD3Q8TEW0 1356 aa20.08■□□□□ 0.81
ATG4B-224ENST00000494132 PER1O15534 1290 aaPredicted RBP20.08■□□□□ 0.81
ATG4B-224ENST00000494132 TATP17735 454 aaPredicted RBP20.08■□□□□ 0.81
ATG4B-224ENST00000494132 EIF4A2Q14240 407 aaKnown RBP20.08■□□□□ 0.81
ATG4B-224ENST00000494132 R3HDM1Q15032 1099 aaKnown RBP20.08■□□□□ 0.81
ATG4B-224ENST00000494132 EYA1Q99502 592 aa20.08■□□□□ 0.81
ATG4B-224ENST00000494132 NCAPD2Q15021 1401 aa20.06■□□□□ 0.8
ATG4B-224ENST00000494132 TOGARAM1Q9Y4F4 1720 aa20.05■□□□□ 0.8
ATG4B-224ENST00000494132 ITGB4P16144 1822 aa20.05■□□□□ 0.8
ATG4B-224ENST00000494132 SYTL4Q96C24 671 aaPredicted RBP20.04■□□□□ 0.8
ATG4B-224ENST00000494132 PLSCR1O15162 318 aa20.03■□□□□ 0.8
ATG4B-224ENST00000494132 PROM2Q8N271 834 aa20.02■□□□□ 0.8
ATG4B-224ENST00000494132 PCDH11XQ9BZA7 1347 aa20.01■□□□□ 0.79
ATG4B-224ENST00000494132 PCDH11YQ9BZA8 1340 aa20.01■□□□□ 0.79
ATG4B-224ENST00000494132 PRIM1P49642 420 aaKnown RBP20■□□□□ 0.79
ATG4B-224ENST00000494132 TXNRD1Q16881 649 aa20■□□□□ 0.79
ATG4B-224ENST00000494132 ANO8Q9HCE9 1232 aaPredicted RBP20■□□□□ 0.79
ATG4B-224ENST00000494132 CYP27B1O15528 508 aa19.99■□□□□ 0.79
ATG4B-224ENST00000494132 MTHFSP49914 203 aa19.99■□□□□ 0.79
ATG4B-224ENST00000494132 NBPF14Q5TI25 921 aa19.99■□□□□ 0.79
ATG4B-224ENST00000494132 IGSF1Q8N6C5 1336 aa19.99■□□□□ 0.79
ATG4B-224ENST00000494132 LY75O60449 1722 aa19.99■□□□□ 0.79
ATG4B-224ENST00000494132 AEBP1Q8IUX7 1158 aa19.98■□□□□ 0.79
ATG4B-224ENST00000494132 LRP5O75197 1615 aa19.96■□□□□ 0.79
ATG4B-224ENST00000494132 PAPPAQ13219 1627 aa19.95■□□□□ 0.78
ATG4B-224ENST00000494132 SPG7Q9UQ90 795 aa19.95■□□□□ 0.78
ATG4B-224ENST00000494132 NPC1L1Q9UHC9 1359 aa19.95■□□□□ 0.78
ATG4B-224ENST00000494132 IL13P35225 146 aa19.94■□□□□ 0.78
ATG4B-224ENST00000494132 KCNQ4P56696 695 aa19.94■□□□□ 0.78
ATG4B-224ENST00000494132 VIRMAQ69YN4 1812 aaKnown RBP19.94■□□□□ 0.78
ATG4B-224ENST00000494132 CASZ1Q86V15 1759 aa19.93■□□□□ 0.78
ATG4B-224ENST00000494132 TUBGCP6Q96RT7 1819 aa19.93■□□□□ 0.78
ATG4B-224ENST00000494132 SULT6B1Q6IMI4 303 aa19.92■□□□□ 0.78
ATG4B-224ENST00000494132 MPRIPQ6WCQ1 1025 aa19.92■□□□□ 0.78
ATG4B-224ENST00000494132 PDGFDQ9GZP0 370 aaPredicted RBP19.91■□□□□ 0.78
ATG4B-224ENST00000494132 LRRC4BQ9NT99 713 aa19.91■□□□□ 0.78
ATG4B-224ENST00000494132 COL3A1P02461 1466 aaPredicted RBP19.91■□□□□ 0.78
ATG4B-224ENST00000494132 SRCAPQ6ZRS2 3230 aa19.9■□□□□ 0.78
ATG4B-224ENST00000494132 PHKG2P15735 406 aa19.9■□□□□ 0.78
ATG4B-224ENST00000494132 TAF1LQ8IZX4 1826 aa19.9■□□□□ 0.78
ATG4B-224ENST00000494132 HMOX1P09601 288 aa19.89■□□□□ 0.77
ATG4B-224ENST00000494132 IFNL2Q8IZJ0 200 aa19.89■□□□□ 0.77
ATG4B-224ENST00000494132 STK32BQ9NY57 414 aa19.89■□□□□ 0.77
ATG4B-224ENST00000494132 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.89■□□□□ 0.77
ATG4B-224ENST00000494132 DIAPH1O60610 1272 aaKnown RBP19.88■□□□□ 0.77
ATG4B-224ENST00000494132 C5P01031 1676 aa19.87■□□□□ 0.77
ATG4B-224ENST00000494132 KDRP35968 1356 aa19.87■□□□□ 0.77
ATG4B-224ENST00000494132 NKX1-1Q15270 411 aaPredicted RBP19.87■□□□□ 0.77
ATG4B-224ENST00000494132 SLC15A2Q16348 729 aa19.87■□□□□ 0.77
ATG4B-224ENST00000494132 ZNF827Q17R98 1081 aa19.87■□□□□ 0.77
ATG4B-224ENST00000494132 ZNF530Q6P9A1 599 aaPredicted RBP19.87■□□□□ 0.77
ATG4B-224ENST00000494132 PLEKHO1Q53GL0 409 aaPredicted RBP19.86■□□□□ 0.77
ATG4B-224ENST00000494132 SCN11AQ9UI33 1791 aa19.85■□□□□ 0.77
ATG4B-224ENST00000494132 PIGBQ92521 554 aa19.85■□□□□ 0.77
ATG4B-224ENST00000494132 CCNL1Q9UK58 526 aaPredicted RBP19.85■□□□□ 0.77
ATG4B-224ENST00000494132 PALLDQ8WX93 1383 aa19.84■□□□□ 0.77
ATG4B-224ENST00000494132 U2SURPO15042 1029 aaKnown RBP19.84■□□□□ 0.77
ATG4B-224ENST00000494132 QSER1Q2KHR3 1735 aa19.84■□□□□ 0.77
ATG4B-224ENST00000494132 KDM6AO15550 1401 aaPredicted RBP19.84■□□□□ 0.77
ATG4B-224ENST00000494132 PPP2R1AP30153 589 aa19.83■□□□□ 0.77
ATG4B-224ENST00000494132 SLC27A3Q5K4L6 730 aa19.83■□□□□ 0.77
ATG4B-224ENST00000494132 PLEKHG2Q9H7P9 1386 aa19.83■□□□□ 0.76
ATG4B-224ENST00000494132 ZBTB7AO95365 584 aa19.82■□□□□ 0.76
ATG4B-224ENST00000494132 AMOTQ4VCS5 1084 aa19.82■□□□□ 0.76
ATG4B-224ENST00000494132 TMOD3Q9NYL9 352 aa19.82■□□□□ 0.76
ATG4B-224ENST00000494132 DDX10Q13206 875 aaKnown RBP19.81■□□□□ 0.76
ATG4B-224ENST00000494132 C1orf141Q5JVX7 400 aa19.8■□□□□ 0.76
ATG4B-224ENST00000494132 AKT1S1Q96B36 256 aa19.8■□□□□ 0.76
ATG4B-224ENST00000494132 ASAP1Q9ULH1 1129 aa19.79■□□□□ 0.76
ATG4B-224ENST00000494132 DCAF5Q96JK2 942 aa19.78■□□□□ 0.76
ATG4B-224ENST00000494132 CFAP53Q96M91 514 aa19.78■□□□□ 0.76
ATG4B-224ENST00000494132 SPON1Q9HCB6 807 aa19.78■□□□□ 0.76
ATG4B-224ENST00000494132 ATF5Q9Y2D1 282 aaPredicted RBP19.78■□□□□ 0.76
ATG4B-224ENST00000494132 C4BP0C0L5 1744 aa19.78■□□□□ 0.76
ATG4B-224ENST00000494132 HSP90AB1P08238 724 aaKnown RBP19.77■□□□□ 0.76
ATG4B-224ENST00000494132 SMARCC1Q92922 1105 aaPredicted RBP19.77■□□□□ 0.76
ATG4B-224ENST00000494132 UBR3Q6ZT12 1888 aa19.76■□□□□ 0.75
ATG4B-224ENST00000494132 MTHFSDQ2M296 383 aaKnown RBP19.76■□□□□ 0.75
ATG4B-224ENST00000494132 TFCP2L1Q9NZI6 479 aa19.76■□□□□ 0.75
ATG4B-224ENST00000494132 PNPLA7Q6ZV29 1317 aa19.76■□□□□ 0.75
ATG4B-224ENST00000494132 CABP4P57796 275 aa19.75■□□□□ 0.75
ATG4B-224ENST00000494132 ATG3Q9NT62 314 aa19.75■□□□□ 0.75
ATG4B-224ENST00000494132 ERVV-2B6SEH9 535 aa19.74■□□□□ 0.75
ATG4B-224ENST00000494132 LOC102724428A0A0B4J2F2 783 aa19.73■□□□□ 0.75
ATG4B-224ENST00000494132 SIK1P57059 783 aa19.73■□□□□ 0.75
ATG4B-224ENST00000494132 AKAP4Q5JQC9 854 aa19.73■□□□□ 0.75
ATG4B-224ENST00000494132 LGR6Q9HBX8 967 aa19.73■□□□□ 0.75
ATG4B-224ENST00000494132 PPP1R1BQ9UD71 204 aaPredicted RBP19.73■□□□□ 0.75
ATG4B-224ENST00000494132 ADAMTS7Q9UKP4 1686 aa19.72■□□□□ 0.75
ATG4B-224ENST00000494132 COL5A3P25940 1745 aaPredicted RBP19.72■□□□□ 0.75
ATG4B-224ENST00000494132 ZEB1P37275 1124 aaPredicted RBP19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms