RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 PPP1R18Q6NYC8 613 aa8.48□□□□□ -1.05
CPSF7-213ENST00000494016 C14orf37Q86TY3 774 aa8.48□□□□□ -1.05
CPSF7-213ENST00000494016 PRR7Q8TB68 274 aa8.48□□□□□ -1.05
CPSF7-213ENST00000494016 ZNF775Q96BV0 537 aaPredicted RBP8.48□□□□□ -1.05
CPSF7-213ENST00000494016 RPRD2Q5VT52 1461 aaKnown RBP8.48□□□□□ -1.05
CPSF7-213ENST00000494016 NEO1Q92859 1461 aa8.48□□□□□ -1.05
CPSF7-213ENST00000494016 MYO5CQ9NQX4 1742 aa8.48□□□□□ -1.05
CPSF7-213ENST00000494016 NUTM2BA6NNL0 878 aaPredicted RBP8.47□□□□□ -1.05
CPSF7-213ENST00000494016 NUTM2EB1AL46 878 aaPredicted RBP8.47□□□□□ -1.05
CPSF7-213ENST00000494016 GGCXP38435 758 aa8.47□□□□□ -1.05
CPSF7-213ENST00000494016 RTL5Q5HYW3 569 aaPredicted RBP8.47□□□□□ -1.05
CPSF7-213ENST00000494016 NUTM2DQ5VT03 806 aaPredicted RBP8.47□□□□□ -1.05
CPSF7-213ENST00000494016 FBXO31Q5XUX0 539 aaPredicted RBP8.47□□□□□ -1.05
CPSF7-213ENST00000494016 NUTM2AQ8IVF1 878 aaPredicted RBP8.47□□□□□ -1.05
CPSF7-213ENST00000494016 YTHDC1Q96MU7 727 aaKnown RBP8.47□□□□□ -1.05
CPSF7-213ENST00000494016 PRKD2Q9BZL6 878 aa8.47□□□□□ -1.05
CPSF7-213ENST00000494016 PRDM9Q9NQV7 894 aa8.47□□□□□ -1.05
CPSF7-213ENST00000494016 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.47□□□□□ -1.05
CPSF7-213ENST00000494016 PLCH2O75038 1416 aa8.46□□□□□ -1.05
CPSF7-213ENST00000494016 KIAA1107Q9UPP5 1409 aa8.46□□□□□ -1.05
CPSF7-213ENST00000494016 CCDC141Q6ZP82 1450 aa8.46□□□□□ -1.05
CPSF7-213ENST00000494016 CFAP99D6REC4 459 aa8.46□□□□□ -1.06
CPSF7-213ENST00000494016 DXOO77932 396 aaKnown RBP8.46□□□□□ -1.06
CPSF7-213ENST00000494016 MAST1Q9Y2H9 1570 aa8.46□□□□□ -1.06
CPSF7-213ENST00000494016 FANCAO15360 1455 aa8.45□□□□□ -1.06
CPSF7-213ENST00000494016 ARHGAP5Q13017 1502 aa8.45□□□□□ -1.06
CPSF7-213ENST00000494016 KDM5DQ9BY66 1539 aa8.45□□□□□ -1.06
CPSF7-213ENST00000494016 ARHGEF12Q9NZN5 1544 aa8.45□□□□□ -1.06
CPSF7-213ENST00000494016 RNF223E7ERA6 249 aa8.45□□□□□ -1.06
CPSF7-213ENST00000494016 HSPA5P11021 654 aaKnown RBP8.45□□□□□ -1.06
CPSF7-213ENST00000494016 JUNDP17535 347 aa8.45□□□□□ -1.06
CPSF7-213ENST00000494016 DESI1Q6ICB0 168 aa8.45□□□□□ -1.06
CPSF7-213ENST00000494016 NUP155O75694 1391 aa8.45□□□□□ -1.06
CPSF7-213ENST00000494016 KIF15Q9NS87 1388 aa8.45□□□□□ -1.06
CPSF7-213ENST00000494016 LMTK3Q96Q04 1460 aa8.45□□□□□ -1.06
CPSF7-213ENST00000494016 ZMYM4Q5VZL5 1548 aa8.44□□□□□ -1.06
CPSF7-213ENST00000494016 ADAMTSL3P82987 1691 aa8.44□□□□□ -1.06
CPSF7-213ENST00000494016 BCORL1Q5H9F3 1711 aa8.44□□□□□ -1.06
CPSF7-213ENST00000494016 EFCAB2Q5VUJ9 269 aa8.44□□□□□ -1.06
CPSF7-213ENST00000494016 PLEKHH2Q8IVE3 1493 aa8.44□□□□□ -1.06
CPSF7-213ENST00000494016 MADDQ8WXG6 1647 aa8.43□□□□□ -1.06
CPSF7-213ENST00000494016 RAPGEF3O95398 923 aa8.43□□□□□ -1.06
CPSF7-213ENST00000494016 ANKLE1Q8NAG6 615 aa8.43□□□□□ -1.06
CPSF7-213ENST00000494016 SYCP2Q9BX26 1530 aa8.43□□□□□ -1.06
CPSF7-213ENST00000494016 C11orf95C9JLR9 678 aaPredicted RBP8.42□□□□□ -1.06
CPSF7-213ENST00000494016 PPEF1O14829 653 aaPredicted RBP8.42□□□□□ -1.06
CPSF7-213ENST00000494016 RFC5P40937 340 aa8.42□□□□□ -1.06
CPSF7-213ENST00000494016 ZFYVE16Q7Z3T8 1539 aa8.41□□□□□ -1.06
CPSF7-213ENST00000494016 POGZQ7Z3K3 1410 aa8.41□□□□□ -1.06
CPSF7-213ENST00000494016 YEATS2Q9ULM3 1422 aa8.41□□□□□ -1.06
CPSF7-213ENST00000494016 SOCS7O14512 581 aa8.41□□□□□ -1.06
CPSF7-213ENST00000494016 EIF4G2P78344 907 aaKnown RBP eCLIP8.41□□□□□ -1.06
CPSF7-213ENST00000494016 RIMS1Q86UR5 1692 aaKnown RBP8.4□□□□□ -1.06
CPSF7-213ENST00000494016 SPATA31E1Q6ZUB1 1445 aa8.4□□□□□ -1.06
CPSF7-213ENST00000494016 TRAPPC8Q9Y2L5 1435 aa8.4□□□□□ -1.06
CPSF7-213ENST00000494016 WASHC2AQ641Q2 1341 aa8.4□□□□□ -1.06
CPSF7-213ENST00000494016 MYT1Q01538 1121 aa8.4□□□□□ -1.06
CPSF7-213ENST00000494016 PTPRNQ16849 979 aa8.4□□□□□ -1.06
CPSF7-213ENST00000494016 LYPD8Q6UX82 237 aa8.4□□□□□ -1.06
CPSF7-213ENST00000494016 HELBQ8NG08 1087 aaPredicted RBP8.4□□□□□ -1.06
CPSF7-213ENST00000494016 FCF1Q9Y324 198 aaKnown RBP8.4□□□□□ -1.06
CPSF7-213ENST00000494016 PLXNC1O60486 1568 aa8.39□□□□□ -1.07
CPSF7-213ENST00000494016 ABCC1P33527 1531 aa8.39□□□□□ -1.07
CPSF7-213ENST00000494016 ILDR2Q71H61 639 aa8.39□□□□□ -1.07
CPSF7-213ENST00000494016 UNC13BO14795 1591 aa8.39□□□□□ -1.07
CPSF7-213ENST00000494016 KDM5CP41229 1560 aa8.39□□□□□ -1.07
CPSF7-213ENST00000494016 CCER2I3L3R5 266 aa8.38□□□□□ -1.07
CPSF7-213ENST00000494016 TMEM259Q4ZIN3 620 aa8.38□□□□□ -1.07
CPSF7-213ENST00000494016 PLA2G2CQ5R387 149 aa8.38□□□□□ -1.07
CPSF7-213ENST00000494016 TSC1Q92574 1164 aa8.38□□□□□ -1.07
CPSF7-213ENST00000494016 NUDT12Q9BQG2 462 aa8.38□□□□□ -1.07
CPSF7-213ENST00000494016 PDZRN3Q9UPQ7 1066 aa8.38□□□□□ -1.07
CPSF7-213ENST00000494016 V9GY48 417 aaPredicted RBP8.38□□□□□ -1.07
CPSF7-213ENST00000494016 ABCA6Q8N139 1617 aa8.38□□□□□ -1.07
CPSF7-213ENST00000494016 DUOX2Q9NRD8 1548 aa8.38□□□□□ -1.07
CPSF7-213ENST00000494016 FAM135AQ9P2D6 1515 aa8.38□□□□□ -1.07
CPSF7-213ENST00000494016 FER1L4A9Z1Z3 1794 aa8.38□□□□□ -1.07
CPSF7-213ENST00000494016 UHRF1BP1Q6BDS2 1440 aa8.37□□□□□ -1.07
CPSF7-213ENST00000494016 DIP2CQ9Y2E4 1556 aa8.37□□□□□ -1.07
CPSF7-213ENST00000494016 PER1O15534 1290 aaPredicted RBP8.37□□□□□ -1.07
CPSF7-213ENST00000494016 CCNYL3P0C7X3 344 aa8.37□□□□□ -1.07
CPSF7-213ENST00000494016 CTDSPL2Q05D32 466 aa8.37□□□□□ -1.07
CPSF7-213ENST00000494016 AFAP1Q8N556 730 aa8.37□□□□□ -1.07
CPSF7-213ENST00000494016 PTPRMP28827 1452 aa8.37□□□□□ -1.07
CPSF7-213ENST00000494016 PLA2R1Q13018 1463 aa8.37□□□□□ -1.07
CPSF7-213ENST00000494016 RTEL1-TNFRSF6BF6WH68 1400 aa8.37□□□□□ -1.07
CPSF7-213ENST00000494016 SCAPERQ9BY12 1400 aa8.37□□□□□ -1.07
CPSF7-213ENST00000494016 ANP32CO43423 234 aa8.36□□□□□ -1.07
CPSF7-213ENST00000494016 AP1G2O75843 785 aa8.36□□□□□ -1.07
CPSF7-213ENST00000494016 EMID1Q96A84 441 aaPredicted RBP8.36□□□□□ -1.07
CPSF7-213ENST00000494016 EVA1BQ9NVM1 165 aa8.36□□□□□ -1.07
CPSF7-213ENST00000494016 IQGAP3Q86VI3 1631 aa8.36□□□□□ -1.07
CPSF7-213ENST00000494016 CCDC7Q96M83 1385 aa8.35□□□□□ -1.07
CPSF7-213ENST00000494016 DISP3Q9P2K9 1392 aa8.35□□□□□ -1.07
CPSF7-213ENST00000494016 SPAG9O60271 1321 aaKnown RBP8.35□□□□□ -1.07
CPSF7-213ENST00000494016 F12P00748 615 aaPredicted RBP8.35□□□□□ -1.07
CPSF7-213ENST00000494016 CCDC24Q8N4L8 307 aa8.35□□□□□ -1.07
CPSF7-213ENST00000494016 ERBINQ96RT1 1412 aa8.35□□□□□ -1.07
CPSF7-213ENST00000494016 ZNF518AQ6AHZ1 1483 aa8.34□□□□□ -1.07
CPSF7-213ENST00000494016 MAGI2Q86UL8 1455 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms