RNA–Protein interactions for RNA: ENST00000493627.1

NFIA-213, Transcript of nuclear factor I A, humanhuman

TSL 1 (best)

Gene NFIA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-213ENST00000493627 RGPD2P0DJD1 1756 aa12.71□□□□□ -0.37
NFIA-213ENST00000493627 ZNF827Q17R98 1081 aa12.71□□□□□ -0.37
NFIA-213ENST00000493627 MTFR1LQ9H019 292 aa12.71□□□□□ -0.37
NFIA-213ENST00000493627 ATF5Q9Y2D1 282 aaPredicted RBP12.71□□□□□ -0.37
NFIA-213ENST00000493627 NSD2O96028 1365 aa12.7□□□□□ -0.38
NFIA-213ENST00000493627 FLT4P35916 1363 aa12.7□□□□□ -0.38
NFIA-213ENST00000493627 KIF24Q5T7B8 1368 aa12.7□□□□□ -0.38
NFIA-213ENST00000493627 CLSPNQ9HAW4 1339 aa12.7□□□□□ -0.38
NFIA-213ENST00000493627 NBPF6Q5VWK0 638 aa12.7□□□□□ -0.38
NFIA-213ENST00000493627 USHBP1Q8N6Y0 703 aa12.7□□□□□ -0.38
NFIA-213ENST00000493627 ZCRB1Q8TBF4 217 aaKnown RBP12.7□□□□□ -0.38
NFIA-213ENST00000493627 SYTL4Q96C24 671 aaPredicted RBP12.7□□□□□ -0.38
NFIA-213ENST00000493627 NBPF4Q96M43 638 aa12.7□□□□□ -0.38
NFIA-213ENST00000493627 LRRC4BQ9NT99 713 aa12.7□□□□□ -0.38
NFIA-213ENST00000493627 TIMELESSQ9UNS1 1208 aa12.7□□□□□ -0.38
NFIA-213ENST00000493627 INSRP06213 1382 aa12.69□□□□□ -0.38
NFIA-213ENST00000493627 CGNL1Q0VF96 1302 aa12.68□□□□□ -0.38
NFIA-213ENST00000493627 DCAF8L1A6NGE4 600 aa12.68□□□□□ -0.38
NFIA-213ENST00000493627 PRIM1P49642 420 aaKnown RBP12.68□□□□□ -0.38
NFIA-213ENST00000493627 HSP90AB2PQ58FF8 381 aa12.68□□□□□ -0.38
NFIA-213ENST00000493627 SLC27A3Q5K4L6 730 aa12.68□□□□□ -0.38
NFIA-213ENST00000493627 RAPGEF4Q8WZA2 1011 aa12.68□□□□□ -0.38
NFIA-213ENST00000493627 SGIP1Q9BQI5 828 aa12.68□□□□□ -0.38
NFIA-213ENST00000493627 CARD14Q9BXL6 1004 aa12.68□□□□□ -0.38
NFIA-213ENST00000493627 YY1P25490 414 aa12.67□□□□□ -0.38
NFIA-213ENST00000493627 PCGF6Q9BYE7 350 aa12.67□□□□□ -0.38
NFIA-213ENST00000493627 LY75O60449 1722 aa12.66□□□□□ -0.38
NFIA-213ENST00000493627 ANKRD26Q9UPS8 1709 aa12.66□□□□□ -0.38
NFIA-213ENST00000493627 AKT1S1Q96B36 256 aa12.66□□□□□ -0.38
NFIA-213ENST00000493627 FHDC1Q9C0D6 1143 aaPredicted RBP12.66□□□□□ -0.38
NFIA-213ENST00000493627 EMILIN1Q9Y6C2 1016 aa12.66□□□□□ -0.38
NFIA-213ENST00000493627 QSER1Q2KHR3 1735 aa12.65□□□□□ -0.38
NFIA-213ENST00000493627 PCDH11XQ9BZA7 1347 aa12.65□□□□□ -0.38
NFIA-213ENST00000493627 PCDH11YQ9BZA8 1340 aa12.65□□□□□ -0.38
NFIA-213ENST00000493627 TATP17735 454 aaPredicted RBP12.65□□□□□ -0.38
NFIA-213ENST00000493627 NCAPD2Q15021 1401 aa12.64□□□□□ -0.39
NFIA-213ENST00000493627 KCNQ4P56696 695 aa12.64□□□□□ -0.39
NFIA-213ENST00000493627 SYT17Q9BSW7 474 aa12.64□□□□□ -0.39
NFIA-213ENST00000493627 PNPLA7Q6ZV29 1317 aa12.63□□□□□ -0.39
NFIA-213ENST00000493627 KAT6BQ8WYB5 2073 aa12.63□□□□□ -0.39
NFIA-213ENST00000493627 ARXQ96QS3 562 aa12.63□□□□□ -0.39
NFIA-213ENST00000493627 CCNL1Q9UK58 526 aaPredicted RBP12.63□□□□□ -0.39
NFIA-213ENST00000493627 MAP3K5Q99683 1374 aa12.63□□□□□ -0.39
NFIA-213ENST00000493627 PKD1L3Q7Z443 1732 aa12.62□□□□□ -0.39
NFIA-213ENST00000493627 TUBGCP6Q96RT7 1819 aa12.62□□□□□ -0.39
NFIA-213ENST00000493627 PPM1GO15355 546 aaPredicted RBP12.62□□□□□ -0.39
NFIA-213ENST00000493627 SLC16A10Q8TF71 515 aa12.62□□□□□ -0.39
NFIA-213ENST00000493627 POLR3GLQ9BT43 218 aa12.62□□□□□ -0.39
NFIA-213ENST00000493627 TFCP2L1Q9NZI6 479 aa12.62□□□□□ -0.39
NFIA-213ENST00000493627 TOGARAM1Q9Y4F4 1720 aa12.62□□□□□ -0.39
NFIA-213ENST00000493627 PALLDQ8WX93 1383 aa12.6□□□□□ -0.39
NFIA-213ENST00000493627 UTRNP46939 3433 aa12.6□□□□□ -0.39
NFIA-213ENST00000493627 CYP27B1O15528 508 aa12.6□□□□□ -0.39
NFIA-213ENST00000493627 POLD1P28340 1107 aa12.6□□□□□ -0.39
NFIA-213ENST00000493627 WASHC2AQ641Q2 1341 aa12.6□□□□□ -0.39
NFIA-213ENST00000493627 COL24A1Q17RW2 1714 aa12.59□□□□□ -0.39
NFIA-213ENST00000493627 C5P01031 1676 aa12.59□□□□□ -0.39
NFIA-213ENST00000493627 EIF4G2P78344 907 aaKnown RBP eCLIP12.59□□□□□ -0.39
NFIA-213ENST00000493627 MPRIPQ6WCQ1 1025 aa12.58□□□□□ -0.4
NFIA-213ENST00000493627 KLHL34Q8N239 644 aa12.58□□□□□ -0.4
NFIA-213ENST00000493627 POLKQ9UBT6 870 aa12.58□□□□□ -0.4
NFIA-213ENST00000493627 HSPA5P11021 654 aaKnown RBP12.57□□□□□ -0.4
NFIA-213ENST00000493627 EYA1Q99502 592 aa12.57□□□□□ -0.4
NFIA-213ENST00000493627 SPG7Q9UQ90 795 aa12.57□□□□□ -0.4
NFIA-213ENST00000493627 TNNT2P45379 298 aaPredicted RBP12.56□□□□□ -0.4
NFIA-213ENST00000493627 COL23A1Q86Y22 540 aaPredicted RBP12.56□□□□□ -0.4
NFIA-213ENST00000493627 CCER1Q8TC90 406 aaPredicted RBP12.56□□□□□ -0.4
NFIA-213ENST00000493627 C4BP0C0L5 1744 aa12.55□□□□□ -0.4
NFIA-213ENST00000493627 EIF4A2Q14240 407 aaKnown RBP12.55□□□□□ -0.4
NFIA-213ENST00000493627 NKX1-1Q15270 411 aaPredicted RBP12.55□□□□□ -0.4
NFIA-213ENST00000493627 SMARCC1Q92922 1105 aaPredicted RBP12.55□□□□□ -0.4
NFIA-213ENST00000493627 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.55□□□□□ -0.4
NFIA-213ENST00000493627 MAP2P11137 1827 aaKnown RBP12.55□□□□□ -0.4
NFIA-213ENST00000493627 PLEKHG2Q9H7P9 1386 aa12.55□□□□□ -0.4
NFIA-213ENST00000493627 ITGB4P16144 1822 aa12.54□□□□□ -0.4
NFIA-213ENST00000493627 HMGB2P26583 209 aaKnown RBP12.54□□□□□ -0.4
NFIA-213ENST00000493627 PIGBQ92521 554 aa12.54□□□□□ -0.4
NFIA-213ENST00000493627 PANK3Q9H999 370 aa12.54□□□□□ -0.4
NFIA-213ENST00000493627 TAF1LQ8IZX4 1826 aa12.53□□□□□ -0.4
NFIA-213ENST00000493627 PHKG2P15735 406 aa12.53□□□□□ -0.4
NFIA-213ENST00000493627 MSL1Q68DK7 614 aa12.53□□□□□ -0.4
NFIA-213ENST00000493627 NLGN2Q8NFZ4 835 aa12.53□□□□□ -0.4
NFIA-213ENST00000493627 IGSF1Q8N6C5 1336 aa12.53□□□□□ -0.4
NFIA-213ENST00000493627 GOLGB1Q14789 3259 aaKnown RBP12.52□□□□□ -0.41
NFIA-213ENST00000493627 GPR162Q16538 588 aa12.52□□□□□ -0.41
NFIA-213ENST00000493627 IFNL2Q8IZJ0 200 aa12.52□□□□□ -0.41
NFIA-213ENST00000493627 ZNF784Q8NCA9 323 aaPredicted RBP12.52□□□□□ -0.41
NFIA-213ENST00000493627 FLAD1Q8NFF5 587 aa12.52□□□□□ -0.41
NFIA-213ENST00000493627 AK7Q96M32 723 aa12.52□□□□□ -0.41
NFIA-213ENST00000493627 TMOD3Q9NYL9 352 aa12.52□□□□□ -0.41
NFIA-213ENST00000493627 AMIGO3Q86WK7 504 aa12.51□□□□□ -0.41
NFIA-213ENST00000493627 PELP1Q8IZL8 1130 aaKnown RBP12.51□□□□□ -0.41
NFIA-213ENST00000493627 LOC102724428A0A0B4J2F2 783 aa12.5□□□□□ -0.41
NFIA-213ENST00000493627 SIK1P57059 783 aa12.5□□□□□ -0.41
NFIA-213ENST00000493627 LINC00116Q8NCU8 138 aa12.5□□□□□ -0.41
NFIA-213ENST00000493627 UBR3Q6ZT12 1888 aa12.49□□□□□ -0.41
NFIA-213ENST00000493627 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.49□□□□□ -0.41
NFIA-213ENST00000493627 PHF14O94880 888 aa12.49□□□□□ -0.41
NFIA-213ENST00000493627 MORC1Q86VD1 984 aa12.49□□□□□ -0.41
NFIA-213ENST00000493627 ASAP1Q9ULH1 1129 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms