RNA–Protein interactions for RNA: ENST00000493467.5

TSC1-207, Transcript of TSC complex subunit 1, humanhuman

TSL 1 (best)

Gene TSC1, Length 2,219 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-207ENST00000493467 RBM25P49756 843 aaKnown RBP12.22□□□□□ -0.45
TSC1-207ENST00000493467 AKAP12Q02952 1782 aa12.22□□□□□ -0.45
TSC1-207ENST00000493467 NRKQ7Z2Y5 1582 aa12.21□□□□□ -0.45
TSC1-207ENST00000493467 RIMS2Q9UQ26 1411 aa12.21□□□□□ -0.45
TSC1-207ENST00000493467 MLLT3P42568 568 aaPredicted RBP12.21□□□□□ -0.45
TSC1-207ENST00000493467 CABP1Q9NZU7 370 aa12.21□□□□□ -0.45
TSC1-207ENST00000493467 AATKQ6ZMQ8 1374 aa12.21□□□□□ -0.45
TSC1-207ENST00000493467 C3P01024 1663 aa12.2□□□□□ -0.46
TSC1-207ENST00000493467 A6NJR5 290 aa12.2□□□□□ -0.46
TSC1-207ENST00000493467 CALD1Q05682 793 aaKnown RBP12.2□□□□□ -0.46
TSC1-207ENST00000493467 C22orf23Q9BZE7 217 aa12.2□□□□□ -0.46
TSC1-207ENST00000493467 POLKQ9UBT6 870 aa12.2□□□□□ -0.46
TSC1-207ENST00000493467 BRPF3Q9ULD4 1205 aa12.2□□□□□ -0.46
TSC1-207ENST00000493467 NUCB1Q02818 461 aa12.19□□□□□ -0.46
TSC1-207ENST00000493467 NFE2L2Q16236 605 aa12.19□□□□□ -0.46
TSC1-207ENST00000493467 ARHGAP45Q92619 1136 aa12.19□□□□□ -0.46
TSC1-207ENST00000493467 SLKQ9H2G2 1235 aaPredicted RBP12.19□□□□□ -0.46
TSC1-207ENST00000493467 CHMP4BQ9H444 224 aaKnown RBP12.19□□□□□ -0.46
TSC1-207ENST00000493467 ITSN1Q15811 1721 aa12.19□□□□□ -0.46
TSC1-207ENST00000493467 CPS1P31327 1500 aa12.19□□□□□ -0.46
TSC1-207ENST00000493467 NCOA3Q9Y6Q9 1424 aa12.19□□□□□ -0.46
TSC1-207ENST00000493467 PRKAR2BP31323 418 aa12.19□□□□□ -0.46
TSC1-207ENST00000493467 FBXO31Q5XUX0 539 aaPredicted RBP12.19□□□□□ -0.46
TSC1-207ENST00000493467 DLG5Q8TDM6 1919 aa12.19□□□□□ -0.46
TSC1-207ENST00000493467 TMCO4Q5TGY1 634 aa12.18□□□□□ -0.46
TSC1-207ENST00000493467 TECPR2O15040 1411 aa12.18□□□□□ -0.46
TSC1-207ENST00000493467 IFT57Q9NWB7 429 aa12.18□□□□□ -0.46
TSC1-207ENST00000493467 MFAP1P55081 439 aaKnown RBP12.17□□□□□ -0.46
TSC1-207ENST00000493467 NCKAP5LQ9HCH0 1330 aa12.17□□□□□ -0.46
TSC1-207ENST00000493467 ZNF853P0CG23 659 aa12.17□□□□□ -0.46
TSC1-207ENST00000493467 GNAI1P63096 354 aa12.17□□□□□ -0.46
TSC1-207ENST00000493467 MRPL50Q8N5N7 158 aaKnown RBP12.17□□□□□ -0.46
TSC1-207ENST00000493467 GZF1Q9H116 711 aaPredicted RBP12.17□□□□□ -0.46
TSC1-207ENST00000493467 IL13P35225 146 aa12.16□□□□□ -0.46
TSC1-207ENST00000493467 MNX1P50219 401 aaPredicted RBP12.16□□□□□ -0.46
TSC1-207ENST00000493467 ABCC4O15439 1325 aa12.16□□□□□ -0.46
TSC1-207ENST00000493467 KIF24Q5T7B8 1368 aa12.16□□□□□ -0.46
TSC1-207ENST00000493467 GCC1Q96CN9 775 aa12.15□□□□□ -0.46
TSC1-207ENST00000493467 CHMP5Q9NZZ3 219 aa12.15□□□□□ -0.46
TSC1-207ENST00000493467 VAMP4O75379 141 aa12.15□□□□□ -0.46
TSC1-207ENST00000493467 LMOD3Q0VAK6 560 aa12.15□□□□□ -0.46
TSC1-207ENST00000493467 BMP2KLQ5H9B9 411 aa12.15□□□□□ -0.46
TSC1-207ENST00000493467 CHD1LQ86WJ1 897 aa12.15□□□□□ -0.46
TSC1-207ENST00000493467 SIRT1Q96EB6 747 aa12.15□□□□□ -0.46
TSC1-207ENST00000493467 TOPAZ1Q8N9V7 1692 aa12.14□□□□□ -0.47
TSC1-207ENST00000493467 WASLO00401 505 aaPredicted RBP12.14□□□□□ -0.47
TSC1-207ENST00000493467 ZBTB7BO15156 539 aaPredicted RBP12.14□□□□□ -0.47
TSC1-207ENST00000493467 L1TD1Q5T7N2 865 aaKnown RBP12.14□□□□□ -0.47
TSC1-207ENST00000493467 SNX21Q969T3 373 aa12.14□□□□□ -0.47
TSC1-207ENST00000493467 CYB5RLQ6IPT4 315 aa12.14□□□□□ -0.47
TSC1-207ENST00000493467 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.14□□□□□ -0.474e-6■■□□□ 11.7
TSC1-207ENST00000493467 HSCBQ8IWL3 235 aa12.13□□□□□ -0.47
TSC1-207ENST00000493467 PHACTR3Q96KR7 559 aa12.13□□□□□ -0.47
TSC1-207ENST00000493467 NALCNQ8IZF0 1738 aa12.13□□□□□ -0.47
TSC1-207ENST00000493467 MCM4P33991 863 aa12.13□□□□□ -0.47
TSC1-207ENST00000493467 WAPLQ7Z5K2 1190 aa12.13□□□□□ -0.47
TSC1-207ENST00000493467 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.13□□□□□ -0.47
TSC1-207ENST00000493467 DDIT3P35638 169 aa12.12□□□□□ -0.47
TSC1-207ENST00000493467 RETREG2Q8NC44 543 aa12.12□□□□□ -0.47
TSC1-207ENST00000493467 EMILIN1Q9Y6C2 1016 aa12.12□□□□□ -0.47
TSC1-207ENST00000493467 FAM43AQ8N2R8 423 aa12.11□□□□□ -0.47
TSC1-207ENST00000493467 LARP6Q9BRS8 491 aaKnown RBP12.11□□□□□ -0.47
TSC1-207ENST00000493467 LNPKQ9C0E8 428 aa12.11□□□□□ -0.47
TSC1-207ENST00000493467 MBIPQ9NS73 344 aa12.11□□□□□ -0.47
TSC1-207ENST00000493467 RGPD1P0DJD0 1748 aa12.11□□□□□ -0.47
TSC1-207ENST00000493467 IRF5Q13568 498 aa12.11□□□□□ -0.47
TSC1-207ENST00000493467 METP08581 1390 aa12.1□□□□□ -0.47
TSC1-207ENST00000493467 TSPOAP1O95153 1857 aa12.1□□□□□ -0.47
TSC1-207ENST00000493467 HMOX1P09601 288 aa12.1□□□□□ -0.47
TSC1-207ENST00000493467 NME9Q86XW9 330 aa12.1□□□□□ -0.47
TSC1-207ENST00000493467 API5Q9BZZ5 524 aaKnown RBP12.1□□□□□ -0.47
TSC1-207ENST00000493467 TSPYL6Q8N831 410 aa12.1□□□□□ -0.47
TSC1-207ENST00000493467 FSD2A1L4K1 749 aa12.09□□□□□ -0.47
TSC1-207ENST00000493467 TWISTNBQ3B726 338 aaPredicted RBP12.09□□□□□ -0.47
TSC1-207ENST00000493467 COG3Q96JB2 828 aa12.09□□□□□ -0.47
TSC1-207ENST00000493467 UBR1Q8IWV7 1749 aa12.09□□□□□ -0.47
TSC1-207ENST00000493467 EIF5BO60841 1220 aaKnown RBP12.09□□□□□ -0.47
TSC1-207ENST00000493467 FBLN1P23142 703 aa12.09□□□□□ -0.47
TSC1-207ENST00000493467 NUDT16Q96DE0 195 aaKnown RBP12.09□□□□□ -0.47
TSC1-207ENST00000493467 THUMPD2Q9BTF0 503 aaKnown RBP12.09□□□□□ -0.47
TSC1-207ENST00000493467 DDX11L8A8MPP1 907 aa12.08□□□□□ -0.48
TSC1-207ENST00000493467 CCDC61Q9Y6R9 512 aa12.08□□□□□ -0.48
TSC1-207ENST00000493467 OVOS2A0A0J9YW53 1432 aa12.07□□□□□ -0.48
TSC1-207ENST00000493467 OVOS2Q6IE36 1432 aa12.07□□□□□ -0.48
TSC1-207ENST00000493467 SIRT2Q8IXJ6 389 aa12.07□□□□□ -0.48
TSC1-207ENST00000493467 FAM69CQ0P6D2 419 aa12.07□□□□□ -0.48
TSC1-207ENST00000493467 ANKRD45Q5TZF3 282 aa12.07□□□□□ -0.48
TSC1-207ENST00000493467 RGS12O14924 1447 aa12.06□□□□□ -0.48
TSC1-207ENST00000493467 PEAK1Q9H792 1746 aa12.06□□□□□ -0.48
TSC1-207ENST00000493467 KIF2CQ99661 725 aa12.06□□□□□ -0.48
TSC1-207ENST00000493467 ATP10DQ9P241 1426 aa12.06□□□□□ -0.48
TSC1-207ENST00000493467 FMN2Q9NZ56 1722 aa12.06□□□□□ -0.48
TSC1-207ENST00000493467 MCM6Q14566 821 aa12.06□□□□□ -0.48
TSC1-207ENST00000493467 C8orf58Q8NAV2 365 aa12.06□□□□□ -0.48
TSC1-207ENST00000493467 POM121Q96HA1 1249 aa12.06□□□□□ -0.48
TSC1-207ENST00000493467 ZRANB1Q9UGI0 708 aa12.06□□□□□ -0.48
TSC1-207ENST00000493467 ARIH1Q9Y4X5 557 aaPredicted RBP12.06□□□□□ -0.48
TSC1-207ENST00000493467 KIAA0232Q92628 1395 aa12.06□□□□□ -0.48
TSC1-207ENST00000493467 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.05□□□□□ -0.48
TSC1-207ENST00000493467 INTS3Q68E01 1043 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms