RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 PRIM1P49642 420 aaKnown RBP30.3■■■□□ 2.44
PFDN4-205ENST00000493356 FBLN1P23142 703 aa30.29■■■□□ 2.44
PFDN4-205ENST00000493356 KCNQ4P56696 695 aa30.29■■■□□ 2.44
PFDN4-205ENST00000493356 NSD2O96028 1365 aa30.28■■■□□ 2.44
PFDN4-205ENST00000493356 MEGF6O75095 1541 aa30.27■■■□□ 2.44
PFDN4-205ENST00000493356 POLD1P28340 1107 aa30.27■■■□□ 2.44
PFDN4-205ENST00000493356 AMPHP49418 695 aa30.27■■■□□ 2.44
PFDN4-205ENST00000493356 TFCP2L1Q9NZI6 479 aa30.27■■■□□ 2.44
PFDN4-205ENST00000493356 ST20-MTHFSA0A0A6YYL1 179 aa30.26■■■□□ 2.43
PFDN4-205ENST00000493356 GPR162Q16538 588 aa30.26■■■□□ 2.43
PFDN4-205ENST00000493356 ZCRB1Q8TBF4 217 aaKnown RBP30.26■■■□□ 2.43
PFDN4-205ENST00000493356 KLHL34Q8N239 644 aa30.25■■■□□ 2.43
PFDN4-205ENST00000493356 GOLGB1Q14789 3259 aaKnown RBP30.24■■■□□ 2.43
PFDN4-205ENST00000493356 RTL1A6NKG5 1358 aa30.22■■■□□ 2.43
PFDN4-205ENST00000493356 SLC24A1O60721 1099 aa30.19■■■□□ 2.42
PFDN4-205ENST00000493356 CCNL1Q9UK58 526 aaPredicted RBP30.19■■■□□ 2.42
PFDN4-205ENST00000493356 C1QTNF8P60827 252 aa30.18■■■□□ 2.42
PFDN4-205ENST00000493356 NBPF6Q5VWK0 638 aa30.18■■■□□ 2.42
PFDN4-205ENST00000493356 NBPF4Q96M43 638 aa30.18■■■□□ 2.42
PFDN4-205ENST00000493356 RRS1Q15050 365 aaKnown RBP30.17■■■□□ 2.42
PFDN4-205ENST00000493356 NLGN2Q8NFZ4 835 aa30.17■■■□□ 2.42
PFDN4-205ENST00000493356 USP47Q96K76 1375 aa30.16■■■□□ 2.42
PFDN4-205ENST00000493356 PELP1Q8IZL8 1130 aaKnown RBP30.16■■■□□ 2.42
PFDN4-205ENST00000493356 USHBP1Q8N6Y0 703 aa30.15■■■□□ 2.42
PFDN4-205ENST00000493356 CGNL1Q0VF96 1302 aa30.15■■■□□ 2.42
PFDN4-205ENST00000493356 SENP3-EIF4A1A0A087X0R7 540 aa30.14■■■□□ 2.42
PFDN4-205ENST00000493356 FYB1O15117 783 aa30.14■■■□□ 2.42
PFDN4-205ENST00000493356 GGNBP2Q9H3C7 697 aa30.14■■■□□ 2.42
PFDN4-205ENST00000493356 SMG6Q86US8 1419 aaKnown RBP30.13■■■□□ 2.41
PFDN4-205ENST00000493356 COL23A1Q86Y22 540 aaPredicted RBP30.12■■■□□ 2.41
PFDN4-205ENST00000493356 RAPGEF4Q8WZA2 1011 aa30.12■■■□□ 2.41
PFDN4-205ENST00000493356 C5P01031 1676 aa30.11■■■□□ 2.41
PFDN4-205ENST00000493356 MSH5O43196 834 aa30.1■■■□□ 2.41
PFDN4-205ENST00000493356 KIF20BQ96Q89 1820 aa30.08■■■□□ 2.41
PFDN4-205ENST00000493356 TATP17735 454 aaPredicted RBP30.08■■■□□ 2.41
PFDN4-205ENST00000493356 INSRP06213 1382 aa30.07■■■□□ 2.4
PFDN4-205ENST00000493356 HSP90AB2PQ58FF8 381 aa30.07■■■□□ 2.4
PFDN4-205ENST00000493356 TAF1LQ8IZX4 1826 aa30.06■■■□□ 2.4
PFDN4-205ENST00000493356 TMF1P82094 1093 aa30.06■■■□□ 2.4
PFDN4-205ENST00000493356 PCDH11XQ9BZA7 1347 aa30.05■■■□□ 2.4
PFDN4-205ENST00000493356 PCDH11YQ9BZA8 1340 aa30.05■■■□□ 2.4
PFDN4-205ENST00000493356 YBX3P16989 372 aaKnown RBP eCLIP30.05■■■□□ 2.4
PFDN4-205ENST00000493356 MSL1Q68DK7 614 aa30.05■■■□□ 2.4
PFDN4-205ENST00000493356 FLT4P35916 1363 aa30.04■■■□□ 2.4
PFDN4-205ENST00000493356 GIGYF1O75420 1035 aaPredicted RBP30.04■■■□□ 2.4
PFDN4-205ENST00000493356 KIF24Q5T7B8 1368 aa30.03■■■□□ 2.4
PFDN4-205ENST00000493356 PALLDQ8WX93 1383 aa30.03■■■□□ 2.4
PFDN4-205ENST00000493356 GRIN3BO60391 1043 aa30.02■■■□□ 2.4
PFDN4-205ENST00000493356 TOGARAM1Q9Y4F4 1720 aa30.02■■■□□ 2.4
PFDN4-205ENST00000493356 ITGB4P16144 1822 aa30.01■■■□□ 2.39
PFDN4-205ENST00000493356 CYP27B1O15528 508 aa30■■■□□ 2.39
PFDN4-205ENST00000493356 MPRIPQ6WCQ1 1025 aa30■■■□□ 2.39
PFDN4-205ENST00000493356 PKD1L3Q7Z443 1732 aa29.99■■■□□ 2.39
PFDN4-205ENST00000493356 HMGB2P26583 209 aaKnown RBP29.98■■■□□ 2.39
PFDN4-205ENST00000493356 FLAD1Q8NFF5 587 aa29.98■■■□□ 2.39
PFDN4-205ENST00000493356 C4BP0C0L5 1744 aa29.98■■■□□ 2.39
PFDN4-205ENST00000493356 CD2APQ9Y5K6 639 aa29.96■■■□□ 2.39
PFDN4-205ENST00000493356 CDCA8Q53HL2 280 aa29.94■■■□□ 2.38
PFDN4-205ENST00000493356 EMILIN1Q9Y6C2 1016 aa29.94■■■□□ 2.38
PFDN4-205ENST00000493356 SMARCC1Q92922 1105 aaPredicted RBP29.93■■■□□ 2.38
PFDN4-205ENST00000493356 CARD14Q9BXL6 1004 aa29.93■■■□□ 2.38
PFDN4-205ENST00000493356 NCAPD2Q15021 1401 aa29.93■■■□□ 2.38
PFDN4-205ENST00000493356 UBR3Q6ZT12 1888 aa29.93■■■□□ 2.38
PFDN4-205ENST00000493356 ANKRD26Q9UPS8 1709 aa29.91■■■□□ 2.38
PFDN4-205ENST00000493356 AMIGO3Q86WK7 504 aa29.91■■■□□ 2.38
PFDN4-205ENST00000493356 NSD3Q9BZ95 1437 aa29.9■■■□□ 2.38
PFDN4-205ENST00000493356 AK7Q96M32 723 aa29.9■■■□□ 2.38
PFDN4-205ENST00000493356 CEP350Q5VT06 3117 aa29.9■■■□□ 2.38
PFDN4-205ENST00000493356 PIGBQ92521 554 aa29.89■■■□□ 2.38
PFDN4-205ENST00000493356 MAP2P11137 1827 aaKnown RBP29.89■■■□□ 2.38
PFDN4-205ENST00000493356 ATP10DQ9P241 1426 aa29.88■■■□□ 2.37
PFDN4-205ENST00000493356 NKX1-1Q15270 411 aaPredicted RBP29.88■■■□□ 2.37
PFDN4-205ENST00000493356 SMIM5Q71RC9 77 aa29.86■■■□□ 2.37
PFDN4-205ENST00000493356 PPM1GO15355 546 aaPredicted RBP29.85■■■□□ 2.37
PFDN4-205ENST00000493356 PHF14O94880 888 aa29.85■■■□□ 2.37
PFDN4-205ENST00000493356 SPG7Q9UQ90 795 aa29.85■■■□□ 2.37
PFDN4-205ENST00000493356 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.84■■■□□ 2.37
PFDN4-205ENST00000493356 WASHC2AQ641Q2 1341 aa29.82■■■□□ 2.36
PFDN4-205ENST00000493356 LOC102724428A0A0B4J2F2 783 aa29.82■■■□□ 2.36
PFDN4-205ENST00000493356 SIK1P57059 783 aa29.82■■■□□ 2.36
PFDN4-205ENST00000493356 ADCY9O60503 1353 aa29.81■■■□□ 2.36
PFDN4-205ENST00000493356 SSFA2P28290 1259 aa29.81■■■□□ 2.36
PFDN4-205ENST00000493356 LINC00116Q8NCU8 138 aa29.81■■■□□ 2.36
PFDN4-205ENST00000493356 EYA1Q99502 592 aa29.81■■■□□ 2.36
PFDN4-205ENST00000493356 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.8■■■□□ 2.361e-16■■■■□ 23.8
PFDN4-205ENST00000493356 IGSF1Q8N6C5 1336 aa29.79■■■□□ 2.36
PFDN4-205ENST00000493356 TMOD3Q9NYL9 352 aa29.79■■■□□ 2.36
PFDN4-205ENST00000493356 GPBP1L1Q9HC44 474 aaPredicted RBP29.78■■■□□ 2.36
PFDN4-205ENST00000493356 ASAP1Q9ULH1 1129 aa29.77■■■□□ 2.36
PFDN4-205ENST00000493356 ITPK1Q13572 414 aa29.76■■■□□ 2.35
PFDN4-205ENST00000493356 PHKG2P15735 406 aa29.75■■■□□ 2.35
PFDN4-205ENST00000493356 POLKQ9UBT6 870 aa29.75■■■□□ 2.35
PFDN4-205ENST00000493356 WWC3Q9ULE0 1092 aa29.75■■■□□ 2.35
PFDN4-205ENST00000493356 GNPATO15228 680 aa29.74■■■□□ 2.35
PFDN4-205ENST00000493356 IFNL2Q8IZJ0 200 aa29.74■■■□□ 2.35
PFDN4-205ENST00000493356 ATP6V1AP38606 617 aa29.72■■■□□ 2.35
PFDN4-205ENST00000493356 ZNF526Q8TF50 670 aaPredicted RBP29.72■■■□□ 2.35
PFDN4-205ENST00000493356 ATG3Q9NT62 314 aa29.71■■■□□ 2.35
PFDN4-205ENST00000493356 EIF4A2Q14240 407 aaKnown RBP29.68■■■□□ 2.34
PFDN4-205ENST00000493356 KDRP35968 1356 aa29.67■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms