RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 IL13P35225 146 aa9.8□□□□□ -0.84
PDLIM1-204ENST00000492511 MTHFSP49914 203 aa9.8□□□□□ -0.84
PDLIM1-204ENST00000492511 PROM2Q8N271 834 aa9.8□□□□□ -0.84
PDLIM1-204ENST00000492511 ACSBG1Q96GR2 724 aa9.8□□□□□ -0.84
PDLIM1-204ENST00000492511 PLSCR1O15162 318 aa9.79□□□□□ -0.84
PDLIM1-204ENST00000492511 TATP17735 454 aaPredicted RBP9.79□□□□□ -0.84
PDLIM1-204ENST00000492511 CNGB1Q14028 1251 aaPredicted RBP9.79□□□□□ -0.84
PDLIM1-204ENST00000492511 RAPGEF4Q8WZA2 1011 aa9.79□□□□□ -0.84
PDLIM1-204ENST00000492511 MAP2P11137 1827 aaKnown RBP9.79□□□□□ -0.84
PDLIM1-204ENST00000492511 IGSF1Q8N6C5 1336 aa9.79□□□□□ -0.84
PDLIM1-204ENST00000492511 CYP27B1O15528 508 aa9.78□□□□□ -0.84
PDLIM1-204ENST00000492511 PSDA5PKW4 1024 aaPredicted RBP9.77□□□□□ -0.85
PDLIM1-204ENST00000492511 AEBP1Q8IUX7 1158 aa9.77□□□□□ -0.85
PDLIM1-204ENST00000492511 PARD3Q8TEW0 1356 aa9.76□□□□□ -0.85
PDLIM1-204ENST00000492511 PRIM1P49642 420 aaKnown RBP9.76□□□□□ -0.85
PDLIM1-204ENST00000492511 SHANK3Q9BYB0 1731 aa9.76□□□□□ -0.85
PDLIM1-204ENST00000492511 SBF2Q86WG5 1849 aa9.75□□□□□ -0.85
PDLIM1-204ENST00000492511 DCAF8L1A6NGE4 600 aa9.75□□□□□ -0.85
PDLIM1-204ENST00000492511 ZEB1P37275 1124 aaPredicted RBP9.75□□□□□ -0.85
PDLIM1-204ENST00000492511 NKX1-1Q15270 411 aaPredicted RBP9.75□□□□□ -0.85
PDLIM1-204ENST00000492511 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.75□□□□□ -0.852e-7■□□□□ 9.4
PDLIM1-204ENST00000492511 PCDH11XQ9BZA7 1347 aa9.75□□□□□ -0.85
PDLIM1-204ENST00000492511 PCDH11YQ9BZA8 1340 aa9.75□□□□□ -0.85
PDLIM1-204ENST00000492511 PPP2R1AP30153 589 aa9.74□□□□□ -0.85
PDLIM1-204ENST00000492511 DDX10Q13206 875 aaKnown RBP9.74□□□□□ -0.85
PDLIM1-204ENST00000492511 TXNRD1Q16881 649 aa9.74□□□□□ -0.85
PDLIM1-204ENST00000492511 SULT6B1Q6IMI4 303 aa9.74□□□□□ -0.85
PDLIM1-204ENST00000492511 SPG7Q9UQ90 795 aa9.74□□□□□ -0.85
PDLIM1-204ENST00000492511 KDRP35968 1356 aa9.74□□□□□ -0.85
PDLIM1-204ENST00000492511 COL3A1P02461 1466 aaPredicted RBP9.73□□□□□ -0.85
PDLIM1-204ENST00000492511 DIAPH1O60610 1272 aaKnown RBP9.73□□□□□ -0.85
PDLIM1-204ENST00000492511 PHKG2P15735 406 aa9.73□□□□□ -0.85
PDLIM1-204ENST00000492511 R3HDM1Q15032 1099 aaKnown RBP9.73□□□□□ -0.85
PDLIM1-204ENST00000492511 SYTL4Q96C24 671 aaPredicted RBP9.73□□□□□ -0.85
PDLIM1-204ENST00000492511 LRRC4BQ9NT99 713 aa9.73□□□□□ -0.85
PDLIM1-204ENST00000492511 NHSQ6T4R5 1651 aa9.73□□□□□ -0.85
PDLIM1-204ENST00000492511 RREB1Q92766 1687 aa9.72□□□□□ -0.85
PDLIM1-204ENST00000492511 IFNL2Q8IZJ0 200 aa9.72□□□□□ -0.85
PDLIM1-204ENST00000492511 ANO8Q9HCE9 1232 aaPredicted RBP9.72□□□□□ -0.85
PDLIM1-204ENST00000492511 PLEKHG2Q9H7P9 1386 aa9.72□□□□□ -0.85
PDLIM1-204ENST00000492511 PKD1L3Q7Z443 1732 aa9.71□□□□□ -0.85
PDLIM1-204ENST00000492511 HMOX1P09601 288 aa9.71□□□□□ -0.86
PDLIM1-204ENST00000492511 PLEKHO1Q53GL0 409 aaPredicted RBP9.71□□□□□ -0.86
PDLIM1-204ENST00000492511 NBPF14Q5TI25 921 aa9.71□□□□□ -0.86
PDLIM1-204ENST00000492511 KCNQ4P56696 695 aa9.7□□□□□ -0.86
PDLIM1-204ENST00000492511 AMOTQ4VCS5 1084 aa9.7□□□□□ -0.86
PDLIM1-204ENST00000492511 MPRIPQ6WCQ1 1025 aa9.7□□□□□ -0.86
PDLIM1-204ENST00000492511 PIGBQ92521 554 aa9.7□□□□□ -0.86
PDLIM1-204ENST00000492511 NUP188Q5SRE5 1749 aa9.7□□□□□ -0.86
PDLIM1-204ENST00000492511 RGPD3A6NKT7 1758 aaPredicted RBP9.69□□□□□ -0.86
PDLIM1-204ENST00000492511 ZNF530Q6P9A1 599 aaPredicted RBP9.69□□□□□ -0.86
PDLIM1-204ENST00000492511 RGPD4Q7Z3J3 1758 aa9.69□□□□□ -0.86
PDLIM1-204ENST00000492511 PDGFDQ9GZP0 370 aaPredicted RBP9.69□□□□□ -0.86
PDLIM1-204ENST00000492511 PPP1R1BQ9UD71 204 aaPredicted RBP9.69□□□□□ -0.86
PDLIM1-204ENST00000492511 BTAF1O14981 1849 aa9.68□□□□□ -0.86
PDLIM1-204ENST00000492511 DOT1LQ8TEK3 1739 aa9.68□□□□□ -0.86
PDLIM1-204ENST00000492511 KDM6AO15550 1401 aaPredicted RBP9.68□□□□□ -0.86
PDLIM1-204ENST00000492511 U2SURPO15042 1029 aaKnown RBP9.68□□□□□ -0.86
PDLIM1-204ENST00000492511 SLC15A2Q16348 729 aa9.68□□□□□ -0.86
PDLIM1-204ENST00000492511 ZNF827Q17R98 1081 aa9.68□□□□□ -0.86
PDLIM1-204ENST00000492511 MTHFSDQ2M296 383 aaKnown RBP9.68□□□□□ -0.86
PDLIM1-204ENST00000492511 TOGARAM1Q9Y4F4 1720 aa9.68□□□□□ -0.86
PDLIM1-204ENST00000492511 ERVV-2B6SEH9 535 aa9.67□□□□□ -0.86
PDLIM1-204ENST00000492511 YY1P25490 414 aa9.67□□□□□ -0.86
PDLIM1-204ENST00000492511 SLC27A3Q5K4L6 730 aa9.67□□□□□ -0.86
PDLIM1-204ENST00000492511 AKT1S1Q96B36 256 aa9.67□□□□□ -0.86
PDLIM1-204ENST00000492511 DCAF5Q96JK2 942 aa9.67□□□□□ -0.86
PDLIM1-204ENST00000492511 CFAP53Q96M91 514 aa9.67□□□□□ -0.86
PDLIM1-204ENST00000492511 RSPH6AQ9H0K4 717 aa9.67□□□□□ -0.86
PDLIM1-204ENST00000492511 LGR6Q9HBX8 967 aa9.67□□□□□ -0.86
PDLIM1-204ENST00000492511 ATG3Q9NT62 314 aa9.67□□□□□ -0.86
PDLIM1-204ENST00000492511 ASAP1Q9ULH1 1129 aa9.67□□□□□ -0.86
PDLIM1-204ENST00000492511 HSP90AB1P08238 724 aaKnown RBP9.66□□□□□ -0.86
PDLIM1-204ENST00000492511 RALBP1Q15311 655 aa9.66□□□□□ -0.86
PDLIM1-204ENST00000492511 AKAP4Q5JQC9 854 aa9.66□□□□□ -0.86
PDLIM1-204ENST00000492511 PHACTR3Q96KR7 559 aa9.66□□□□□ -0.86
PDLIM1-204ENST00000492511 TMOD3Q9NYL9 352 aa9.66□□□□□ -0.86
PDLIM1-204ENST00000492511 PALLDQ8WX93 1383 aa9.65□□□□□ -0.86
PDLIM1-204ENST00000492511 PAPPAQ13219 1627 aa9.65□□□□□ -0.86
PDLIM1-204ENST00000492511 C1orf141Q5JVX7 400 aa9.65□□□□□ -0.86
PDLIM1-204ENST00000492511 SLC4A9Q96Q91 983 aa9.65□□□□□ -0.86
PDLIM1-204ENST00000492511 SPON1Q9HCB6 807 aa9.65□□□□□ -0.86
PDLIM1-204ENST00000492511 STK32BQ9NY57 414 aa9.65□□□□□ -0.86
PDLIM1-204ENST00000492511 CCNL1Q9UK58 526 aaPredicted RBP9.65□□□□□ -0.86
PDLIM1-204ENST00000492511 ZNF316A6NFI3 1004 aaPredicted RBP9.64□□□□□ -0.87
PDLIM1-204ENST00000492511 RNMTO43148 476 aaKnown RBP9.64□□□□□ -0.87
PDLIM1-204ENST00000492511 U2AF1L5P0DN76 240 aaPredicted RBP9.64□□□□□ -0.87
PDLIM1-204ENST00000492511 PRKAR2BP31323 418 aa9.64□□□□□ -0.87
PDLIM1-204ENST00000492511 CABP4P57796 275 aa9.64□□□□□ -0.87
PDLIM1-204ENST00000492511 U2AF1Q01081 240 aaKnown RBP eCLIP9.64□□□□□ -0.87
PDLIM1-204ENST00000492511 NFATC2IPQ8NCF5 419 aa9.64□□□□□ -0.87
PDLIM1-204ENST00000492511 SMARCC1Q92922 1105 aaPredicted RBP9.64□□□□□ -0.87
PDLIM1-204ENST00000492511 NUDCQ9Y266 331 aa9.64□□□□□ -0.87
PDLIM1-204ENST00000492511 LOC102724428A0A0B4J2F2 783 aa9.63□□□□□ -0.87
PDLIM1-204ENST00000492511 FCHSD2O94868 740 aa9.63□□□□□ -0.87
PDLIM1-204ENST00000492511 SIK1P57059 783 aa9.63□□□□□ -0.87
PDLIM1-204ENST00000492511 ITPK1Q13572 414 aa9.63□□□□□ -0.87
PDLIM1-204ENST00000492511 AMIGO3Q86WK7 504 aa9.63□□□□□ -0.87
PDLIM1-204ENST00000492511 IL17REQ8NFR9 667 aa9.63□□□□□ -0.87
PDLIM1-204ENST00000492511 PRKRIP1Q9H875 184 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms