RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 BTAF1O14981 1849 aa18.66■□□□□ 0.58
CDK9-204ENST00000491521 TNNT2P45379 298 aaPredicted RBP18.66■□□□□ 0.58
CDK9-204ENST00000491521 TXNRD1Q16881 649 aa18.66■□□□□ 0.58
CDK9-204ENST00000491521 FLT4P35916 1363 aa18.66■□□□□ 0.58
CDK9-204ENST00000491521 SYTL4Q96C24 671 aaPredicted RBP18.65■□□□□ 0.58
CDK9-204ENST00000491521 ZCRB1Q8TBF4 217 aaKnown RBP18.64■□□□□ 0.57
CDK9-204ENST00000491521 INSRP06213 1382 aa18.64■□□□□ 0.57
CDK9-204ENST00000491521 RAPGEF4Q8WZA2 1011 aa18.63■□□□□ 0.57
CDK9-204ENST00000491521 PANK3Q9H999 370 aa18.63■□□□□ 0.57
CDK9-204ENST00000491521 MAP2P11137 1827 aaKnown RBP18.63■□□□□ 0.57
CDK9-204ENST00000491521 STK32BQ9NY57 414 aa18.62■□□□□ 0.57
CDK9-204ENST00000491521 SHANK3Q9BYB0 1731 aa18.62■□□□□ 0.57
CDK9-204ENST00000491521 DOT1LQ8TEK3 1739 aa18.61■□□□□ 0.57
CDK9-204ENST00000491521 TATP17735 454 aaPredicted RBP18.61■□□□□ 0.57
CDK9-204ENST00000491521 PRIM1P49642 420 aaKnown RBP18.6■□□□□ 0.57
CDK9-204ENST00000491521 PDGFDQ9GZP0 370 aaPredicted RBP18.6■□□□□ 0.57
CDK9-204ENST00000491521 PPP1R1BQ9UD71 204 aaPredicted RBP18.6■□□□□ 0.57
CDK9-204ENST00000491521 KIF24Q5T7B8 1368 aa18.58■□□□□ 0.57
CDK9-204ENST00000491521 ANKRD26Q9UPS8 1709 aa18.58■□□□□ 0.57
CDK9-204ENST00000491521 ZBTB7AO95365 584 aa18.58■□□□□ 0.56
CDK9-204ENST00000491521 SPON1Q9HCB6 807 aa18.58■□□□□ 0.56
CDK9-204ENST00000491521 CASZ1Q86V15 1759 aa18.56■□□□□ 0.56
CDK9-204ENST00000491521 SLC15A2Q16348 729 aa18.56■□□□□ 0.56
CDK9-204ENST00000491521 POLKQ9UBT6 870 aa18.56■□□□□ 0.56
CDK9-204ENST00000491521 KCNQ4P56696 695 aa18.55■□□□□ 0.56
CDK9-204ENST00000491521 DIEXFQ68CQ4 756 aaKnown RBP18.55■□□□□ 0.56
CDK9-204ENST00000491521 ATF5Q9Y2D1 282 aaPredicted RBP18.55■□□□□ 0.56
CDK9-204ENST00000491521 LRRC4BQ9NT99 713 aa18.54■□□□□ 0.56
CDK9-204ENST00000491521 PCDH11XQ9BZA7 1347 aa18.53■□□□□ 0.56
CDK9-204ENST00000491521 PCDH11YQ9BZA8 1340 aa18.53■□□□□ 0.56
CDK9-204ENST00000491521 ZNF827Q17R98 1081 aa18.52■□□□□ 0.56
CDK9-204ENST00000491521 MORC1Q86VD1 984 aa18.52■□□□□ 0.56
CDK9-204ENST00000491521 EYA1Q99502 592 aa18.52■□□□□ 0.56
CDK9-204ENST00000491521 NSD2O96028 1365 aa18.52■□□□□ 0.55
CDK9-204ENST00000491521 EIF4A2Q14240 407 aaKnown RBP18.51■□□□□ 0.55
CDK9-204ENST00000491521 KNSTRNQ9Y448 316 aa18.51■□□□□ 0.55
CDK9-204ENST00000491521 PAPPAQ13219 1627 aa18.51■□□□□ 0.55
CDK9-204ENST00000491521 CYP27B1O15528 508 aa18.5■□□□□ 0.55
CDK9-204ENST00000491521 CNGB1Q14028 1251 aaPredicted RBP18.5■□□□□ 0.55
CDK9-204ENST00000491521 SLC27A3Q5K4L6 730 aa18.49■□□□□ 0.55
CDK9-204ENST00000491521 MPRIPQ6WCQ1 1025 aa18.49■□□□□ 0.55
CDK9-204ENST00000491521 PKD1L3Q7Z443 1732 aa18.49■□□□□ 0.55
CDK9-204ENST00000491521 CCNL1Q9UK58 526 aaPredicted RBP18.48■□□□□ 0.55
CDK9-204ENST00000491521 SPG7Q9UQ90 795 aa18.48■□□□□ 0.55
CDK9-204ENST00000491521 LY75O60449 1722 aa18.47■□□□□ 0.55
CDK9-204ENST00000491521 TOGARAM1Q9Y4F4 1720 aa18.46■□□□□ 0.55
CDK9-204ENST00000491521 TFCP2L1Q9NZI6 479 aa18.46■□□□□ 0.55
CDK9-204ENST00000491521 NCAPD2Q15021 1401 aa18.46■□□□□ 0.55
CDK9-204ENST00000491521 ITGB4P16144 1822 aa18.46■□□□□ 0.55
CDK9-204ENST00000491521 PER1O15534 1290 aaPredicted RBP18.45■□□□□ 0.54
CDK9-204ENST00000491521 PTGER2P43116 358 aa18.45■□□□□ 0.54
CDK9-204ENST00000491521 AKT1S1Q96B36 256 aa18.45■□□□□ 0.54
CDK9-204ENST00000491521 MTFR1LQ9H019 292 aa18.45■□□□□ 0.54
CDK9-204ENST00000491521 TUBGCP6Q96RT7 1819 aa18.44■□□□□ 0.54
CDK9-204ENST00000491521 MSH5O43196 834 aa18.43■□□□□ 0.54
CDK9-204ENST00000491521 ANP32CO43423 234 aa18.43■□□□□ 0.54
CDK9-204ENST00000491521 PALLDQ8WX93 1383 aa18.42■□□□□ 0.54
CDK9-204ENST00000491521 AMER1Q5JTC6 1135 aaPredicted RBP18.41■□□□□ 0.54
CDK9-204ENST00000491521 CC2D1BQ5T0F9 858 aaKnown RBP18.41■□□□□ 0.54
CDK9-204ENST00000491521 PNPLA7Q6ZV29 1317 aa18.41■□□□□ 0.54
CDK9-204ENST00000491521 IGSF1Q8N6C5 1336 aa18.41■□□□□ 0.54
CDK9-204ENST00000491521 PHKG2P15735 406 aa18.4■□□□□ 0.54
CDK9-204ENST00000491521 AEBP1Q8IUX7 1158 aa18.4■□□□□ 0.54
CDK9-204ENST00000491521 IFNL2Q8IZJ0 200 aa18.4■□□□□ 0.54
CDK9-204ENST00000491521 PIGBQ92521 554 aa18.4■□□□□ 0.54
CDK9-204ENST00000491521 C5P01031 1676 aa18.39■□□□□ 0.53
CDK9-204ENST00000491521 DCAF8L1A6NGE4 600 aa18.39■□□□□ 0.53
CDK9-204ENST00000491521 KLHL34Q8N239 644 aa18.39■□□□□ 0.53
CDK9-204ENST00000491521 FHDC1Q9C0D6 1143 aaPredicted RBP18.39■□□□□ 0.53
CDK9-204ENST00000491521 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.39■□□□□ 0.53
CDK9-204ENST00000491521 TMOD3Q9NYL9 352 aa18.39■□□□□ 0.53
CDK9-204ENST00000491521 QSER1Q2KHR3 1735 aa18.39■□□□□ 0.53
CDK9-204ENST00000491521 NKX1-1Q15270 411 aaPredicted RBP18.38■□□□□ 0.53
CDK9-204ENST00000491521 ARXQ96QS3 562 aa18.38■□□□□ 0.53
CDK9-204ENST00000491521 ZNF530Q6P9A1 599 aaPredicted RBP18.37■□□□□ 0.53
CDK9-204ENST00000491521 SMARCC1Q92922 1105 aaPredicted RBP18.37■□□□□ 0.53
CDK9-204ENST00000491521 SGIP1Q9BQI5 828 aa18.37■□□□□ 0.53
CDK9-204ENST00000491521 PLEKHO1Q53GL0 409 aaPredicted RBP18.36■□□□□ 0.53
CDK9-204ENST00000491521 SULT6B1Q6IMI4 303 aa18.36■□□□□ 0.53
CDK9-204ENST00000491521 TAF1LQ8IZX4 1826 aa18.36■□□□□ 0.53
CDK9-204ENST00000491521 POLD1P28340 1107 aa18.35■□□□□ 0.53
CDK9-204ENST00000491521 MTHFSP49914 203 aa18.35■□□□□ 0.53
CDK9-204ENST00000491521 ASAP1Q9ULH1 1129 aa18.35■□□□□ 0.53
CDK9-204ENST00000491521 MSL1Q68DK7 614 aa18.34■□□□□ 0.53
CDK9-204ENST00000491521 COL23A1Q86Y22 540 aaPredicted RBP18.34■□□□□ 0.53
CDK9-204ENST00000491521 SYT17Q9BSW7 474 aa18.34■□□□□ 0.53
CDK9-204ENST00000491521 IL13P35225 146 aa18.33■□□□□ 0.52
CDK9-204ENST00000491521 SMIM5Q71RC9 77 aa18.33■□□□□ 0.52
CDK9-204ENST00000491521 MIER1Q8N108 512 aa18.33■□□□□ 0.52
CDK9-204ENST00000491521 SLC16A10Q8TF71 515 aa18.33■□□□□ 0.52
CDK9-204ENST00000491521 AK7Q96M32 723 aa18.33■□□□□ 0.52
CDK9-204ENST00000491521 C4BP0C0L5 1744 aa18.32■□□□□ 0.52
CDK9-204ENST00000491521 PHF14O94880 888 aa18.32■□□□□ 0.52
CDK9-204ENST00000491521 RALBP1Q15311 655 aa18.32■□□□□ 0.52
CDK9-204ENST00000491521 C1orf141Q5JVX7 400 aa18.32■□□□□ 0.52
CDK9-204ENST00000491521 PRKRIP1Q9H875 184 aaPredicted RBP18.32■□□□□ 0.52
CDK9-204ENST00000491521 LOC102724428A0A0B4J2F2 783 aa18.31■□□□□ 0.52
CDK9-204ENST00000491521 HSP90AB1P08238 724 aaKnown RBP18.31■□□□□ 0.52
CDK9-204ENST00000491521 HMOX1P09601 288 aa18.31■□□□□ 0.52
CDK9-204ENST00000491521 SIK1P57059 783 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms