RNA–Protein interactions for RNA: ENST00000491383.5

KDM3A-214, Transcript of lysine demethylase 3A, humanhuman

TSL 1 (best)

Gene KDM3A, Length 4,485 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-214ENST00000491383 DNAJC2Q99543 621 aaKnown RBP6.23□□□□□ -1.41
KDM3A-214ENST00000491383 ACBD3Q9H3P7 528 aa6.23□□□□□ -1.41
KDM3A-214ENST00000491383 CFAP70Q5T0N1 1121 aa6.22□□□□□ -1.41
KDM3A-214ENST00000491383 NUTM2DQ5VT03 806 aaPredicted RBP6.22□□□□□ -1.41
KDM3A-214ENST00000491383 TXNDC2Q86VQ3 553 aa6.22□□□□□ -1.41
KDM3A-214ENST00000491383 BICD2Q8TD16 824 aa6.22□□□□□ -1.41
KDM3A-214ENST00000491383 DEF6Q9H4E7 631 aa6.22□□□□□ -1.41
KDM3A-214ENST00000491383 SENP3Q9H4L4 574 aaPredicted RBP6.22□□□□□ -1.41
KDM3A-214ENST00000491383 PPP2R1AP30153 589 aa6.22□□□□□ -1.41
KDM3A-214ENST00000491383 ANO2Q9NQ90 1003 aa6.22□□□□□ -1.41
KDM3A-214ENST00000491383 SLIT1O75093 1534 aa6.22□□□□□ -1.41
KDM3A-214ENST00000491383 NEK4P51957 841 aa6.22□□□□□ -1.41
KDM3A-214ENST00000491383 SF3A1Q15459 793 aaKnown RBP6.22□□□□□ -1.41
KDM3A-214ENST00000491383 ANKLE2Q86XL3 938 aa6.22□□□□□ -1.41
KDM3A-214ENST00000491383 ZKSCAN5Q9Y2L8 839 aa6.22□□□□□ -1.41
KDM3A-214ENST00000491383 VPS37CA5D8V6 355 aaPredicted RBP6.21□□□□□ -1.41
KDM3A-214ENST00000491383 H3BQV1 296 aa6.21□□□□□ -1.41
KDM3A-214ENST00000491383 SSFA2P28290 1259 aa6.21□□□□□ -1.41
KDM3A-214ENST00000491383 SRPK2P78362 688 aaKnown RBP6.21□□□□□ -1.41
KDM3A-214ENST00000491383 SLFN5Q08AF3 891 aa6.21□□□□□ -1.41
KDM3A-214ENST00000491383 IFFO2Q5TF58 517 aa6.21□□□□□ -1.41
KDM3A-214ENST00000491383 PLEKHG1Q9ULL1 1385 aa6.21□□□□□ -1.41
KDM3A-214ENST00000491383 CCDC192P0DO97 292 aa6.21□□□□□ -1.42
KDM3A-214ENST00000491383 ARHGAP23Q9P227 1491 aa6.21□□□□□ -1.42
KDM3A-214ENST00000491383 TRERF1Q96PN7 1200 aa6.21□□□□□ -1.42
KDM3A-214ENST00000491383 SLC4A10Q6U841 1118 aa6.21□□□□□ -1.42
KDM3A-214ENST00000491383 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.21□□□□□ -1.42
KDM3A-214ENST00000491383 ELL2O00472 640 aaPredicted RBP6.2□□□□□ -1.42
KDM3A-214ENST00000491383 IRX3P78415 501 aaPredicted RBP6.2□□□□□ -1.42
KDM3A-214ENST00000491383 ZNF428Q96B54 188 aa6.2□□□□□ -1.42
KDM3A-214ENST00000491383 GCC1Q96CN9 775 aa6.2□□□□□ -1.42
KDM3A-214ENST00000491383 API5Q9BZZ5 524 aaKnown RBP6.2□□□□□ -1.42
KDM3A-214ENST00000491383 RDXP35241 583 aaKnown RBP6.2□□□□□ -1.42
KDM3A-214ENST00000491383 MVPQ14764 893 aaKnown RBP6.2□□□□□ -1.42
KDM3A-214ENST00000491383 RNF20Q5VTR2 975 aa6.2□□□□□ -1.42
KDM3A-214ENST00000491383 BAG4O95429 457 aaKnown RBP6.2□□□□□ -1.42
KDM3A-214ENST00000491383 GORABQ5T7V8 394 aa6.2□□□□□ -1.42
KDM3A-214ENST00000491383 PLCD3Q8N3E9 789 aa6.2□□□□□ -1.42
KDM3A-214ENST00000491383 CCDC34Q96HJ3 373 aa6.2□□□□□ -1.42
KDM3A-214ENST00000491383 GPATCH3Q96I76 525 aa6.2□□□□□ -1.42
KDM3A-214ENST00000491383 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.2□□□□□ -1.42
KDM3A-214ENST00000491383 ALKQ9UM73 1620 aa6.2□□□□□ -1.42
KDM3A-214ENST00000491383 IQGAP1P46940 1657 aa6.2□□□□□ -1.42
KDM3A-214ENST00000491383 DIP2AQ14689 1571 aa6.2□□□□□ -1.42
KDM3A-214ENST00000491383 H0YHG0 523 aa6.19□□□□□ -1.42
KDM3A-214ENST00000491383 LMOD3Q0VAK6 560 aa6.19□□□□□ -1.42
KDM3A-214ENST00000491383 WDR33Q9C0J8 1336 aaKnown RBP6.19□□□□□ -1.42
KDM3A-214ENST00000491383 FIBPO43427 364 aa6.19□□□□□ -1.42
KDM3A-214ENST00000491383 CCDC70Q6NSX1 233 aa6.19□□□□□ -1.42
KDM3A-214ENST00000491383 RTF1Q92541 710 aaKnown RBP6.19□□□□□ -1.42
KDM3A-214ENST00000491383 STK31Q9BXU1 1019 aa6.19□□□□□ -1.42
KDM3A-214ENST00000491383 CCP110O43303 1012 aa6.19□□□□□ -1.42
KDM3A-214ENST00000491383 NOLC1Q14978 699 aaKnown RBP eCLIP6.19□□□□□ -1.42
KDM3A-214ENST00000491383 ZSCAN23Q3MJ62 389 aa6.19□□□□□ -1.42
KDM3A-214ENST00000491383 HDGFL2Q7Z4V5 671 aaPredicted RBP6.19□□□□□ -1.42
KDM3A-214ENST00000491383 CHD1LQ86WJ1 897 aa6.19□□□□□ -1.42
KDM3A-214ENST00000491383 TCP11L2Q8N4U5 519 aa6.19□□□□□ -1.42
KDM3A-214ENST00000491383 IGHDP01880 384 aa6.19□□□□□ -1.42
KDM3A-214ENST00000491383 CCDC27Q2M243 656 aa6.19□□□□□ -1.42
KDM3A-214ENST00000491383 NAT10Q9H0A0 1025 aaKnown RBP6.19□□□□□ -1.42
KDM3A-214ENST00000491383 RNF123Q5XPI4 1314 aa6.19□□□□□ -1.42
KDM3A-214ENST00000491383 ZKSCAN1P17029 563 aaPredicted RBP6.18□□□□□ -1.42
KDM3A-214ENST00000491383 USP8P40818 1118 aa6.18□□□□□ -1.42
KDM3A-214ENST00000491383 ERCC4Q92889 916 aaPredicted RBP6.18□□□□□ -1.42
KDM3A-214ENST00000491383 USP25Q9UHP3 1055 aa6.18□□□□□ -1.42
KDM3A-214ENST00000491383 KDM4FA0A1W2PPD8 638 aa6.18□□□□□ -1.42
KDM3A-214ENST00000491383 CCDC73Q6ZRK6 1079 aa6.18□□□□□ -1.42
KDM3A-214ENST00000491383 KRT222Q8N1A0 295 aa6.18□□□□□ -1.42
KDM3A-214ENST00000491383 NOL7Q9UMY1 257 aaKnown RBP6.18□□□□□ -1.42
KDM3A-214ENST00000491383 TRAK1Q9UPV9 953 aa6.18□□□□□ -1.42
KDM3A-214ENST00000491383 LRPPRCP42704 1394 aaKnown RBP6.18□□□□□ -1.42
KDM3A-214ENST00000491383 YTHDC2Q9H6S0 1430 aaKnown RBP6.18□□□□□ -1.42
KDM3A-214ENST00000491383 SAFB2Q14151 953 aaKnown RBP eCLIP6.18□□□□□ -1.42
KDM3A-214ENST00000491383 TMEM132EQ6IEE7 984 aa6.18□□□□□ -1.42
KDM3A-214ENST00000491383 TMCO3Q6UWJ1 677 aa6.18□□□□□ -1.42
KDM3A-214ENST00000491383 RUFY2Q8WXA3 655 aa6.18□□□□□ -1.42
KDM3A-214ENST00000491383 TBX22Q9Y458 520 aa6.18□□□□□ -1.42
KDM3A-214ENST00000491383 ADGRB1O14514 1584 aa6.18□□□□□ -1.42
KDM3A-214ENST00000491383 TPM1P09493 284 aa6.17□□□□□ -1.42
KDM3A-214ENST00000491383 LTKP29376 864 aa6.17□□□□□ -1.42
KDM3A-214ENST00000491383 GTF2F1P35269 517 aaKnown RBP eCLIP6.17□□□□□ -1.42
KDM3A-214ENST00000491383 RIPK4P57078 832 aa6.17□□□□□ -1.42
KDM3A-214ENST00000491383 UVSSAQ2YD98 709 aa6.17□□□□□ -1.42
KDM3A-214ENST00000491383 DUSP27Q5VZP5 1158 aa6.17□□□□□ -1.42
KDM3A-214ENST00000491383 STK26Q9P289 416 aa6.17□□□□□ -1.42
KDM3A-214ENST00000491383 TNNT1P13805 278 aa6.17□□□□□ -1.42
KDM3A-214ENST00000491383 LRSAM1Q6UWE0 723 aa6.17□□□□□ -1.42
KDM3A-214ENST00000491383 FAM43BQ6ZT52 329 aaPredicted RBP6.17□□□□□ -1.42
KDM3A-214ENST00000491383 UBXN4Q92575 508 aa6.17□□□□□ -1.42
KDM3A-214ENST00000491383 FEZ1Q99689 392 aa6.17□□□□□ -1.42
KDM3A-214ENST00000491383 NOL10Q9BSC4 688 aaKnown RBP6.17□□□□□ -1.42
KDM3A-214ENST00000491383 POLR1AO95602 1720 aaPredicted RBP6.17□□□□□ -1.42
KDM3A-214ENST00000491383 DLC1Q96QB1 1528 aa6.17□□□□□ -1.42
KDM3A-214ENST00000491383 PIK3R4Q99570 1358 aa6.17□□□□□ -1.42
KDM3A-214ENST00000491383 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.17□□□□□ -1.42
KDM3A-214ENST00000491383 KIF2AO00139 706 aaPredicted RBP6.17□□□□□ -1.42
KDM3A-214ENST00000491383 CHRM1P11229 460 aaPredicted RBP6.17□□□□□ -1.42
KDM3A-214ENST00000491383 GTF2E1P29083 439 aaPredicted RBP6.17□□□□□ -1.42
KDM3A-214ENST00000491383 RBM25P49756 843 aaKnown RBP6.17□□□□□ -1.42
KDM3A-214ENST00000491383 DHX8Q14562 1220 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms