RNA–Protein interactions for RNA: ENST00000491335.1

NDUFB4-204, Transcript of NADH:ubiquinone oxidoreductase subunit B4, humanhuman

TSL 2

Gene NDUFB4, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB4-204ENST00000491335 EIF4A2Q14240 407 aaKnown RBP25.28■■□□□ 1.64
NDUFB4-204ENST00000491335 ACSBG1Q96GR2 724 aa25.28■■□□□ 1.64
NDUFB4-204ENST00000491335 CNGB1Q14028 1251 aaPredicted RBP25.25■■□□□ 1.63
NDUFB4-204ENST00000491335 PARD3Q8TEW0 1356 aa25.25■■□□□ 1.63
NDUFB4-204ENST00000491335 SHANK3Q9BYB0 1731 aa25.24■■□□□ 1.63
NDUFB4-204ENST00000491335 NCAPD2Q15021 1401 aa25.24■■□□□ 1.63
NDUFB4-204ENST00000491335 PLSCR1O15162 318 aa25.24■■□□□ 1.63
NDUFB4-204ENST00000491335 NPC1L1Q9UHC9 1359 aa25.22■■□□□ 1.63
NDUFB4-204ENST00000491335 NHSQ6T4R5 1651 aa25.21■■□□□ 1.63
NDUFB4-204ENST00000491335 MTHFSP49914 203 aa25.2■■□□□ 1.62
NDUFB4-204ENST00000491335 RREB1Q92766 1687 aa25.2■■□□□ 1.62
NDUFB4-204ENST00000491335 PSDA5PKW4 1024 aaPredicted RBP25.19■■□□□ 1.62
NDUFB4-204ENST00000491335 IGSF1Q8N6C5 1336 aa25.17■■□□□ 1.62
NDUFB4-204ENST00000491335 PROM2Q8N271 834 aa25.17■■□□□ 1.62
NDUFB4-204ENST00000491335 RGPD3A6NKT7 1758 aaPredicted RBP25.17■■□□□ 1.62
NDUFB4-204ENST00000491335 RGPD4Q7Z3J3 1758 aa25.17■■□□□ 1.62
NDUFB4-204ENST00000491335 NUP188Q5SRE5 1749 aa25.17■■□□□ 1.62
NDUFB4-204ENST00000491335 PCDH11XQ9BZA7 1347 aa25.16■■□□□ 1.62
NDUFB4-204ENST00000491335 PCDH11YQ9BZA8 1340 aa25.16■■□□□ 1.62
NDUFB4-204ENST00000491335 PRIM1P49642 420 aaKnown RBP25.16■■□□□ 1.62
NDUFB4-204ENST00000491335 BTAF1O14981 1849 aa25.16■■□□□ 1.62
NDUFB4-204ENST00000491335 CYP27B1O15528 508 aa25.15■■□□□ 1.62
NDUFB4-204ENST00000491335 R3HDM1Q15032 1099 aaKnown RBP25.15■■□□□ 1.62
NDUFB4-204ENST00000491335 PKD1L3Q7Z443 1732 aa25.15■■□□□ 1.62
NDUFB4-204ENST00000491335 IL13P35225 146 aa25.14■■□□□ 1.62
NDUFB4-204ENST00000491335 SYTL4Q96C24 671 aaPredicted RBP25.14■■□□□ 1.62
NDUFB4-204ENST00000491335 SPG7Q9UQ90 795 aa25.14■■□□□ 1.62
NDUFB4-204ENST00000491335 DOT1LQ8TEK3 1739 aa25.13■■□□□ 1.61
NDUFB4-204ENST00000491335 TXNRD1Q16881 649 aa25.13■■□□□ 1.61
NDUFB4-204ENST00000491335 NBPF14Q5TI25 921 aa25.13■■□□□ 1.61
NDUFB4-204ENST00000491335 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.12■■□□□ 1.61
NDUFB4-204ENST00000491335 AEBP1Q8IUX7 1158 aa25.1■■□□□ 1.61
NDUFB4-204ENST00000491335 SULT6B1Q6IMI4 303 aa25.09■■□□□ 1.61
NDUFB4-204ENST00000491335 ZEB1P37275 1124 aaPredicted RBP25.07■■□□□ 1.6
NDUFB4-204ENST00000491335 NKX1-1Q15270 411 aaPredicted RBP25.07■■□□□ 1.6
NDUFB4-204ENST00000491335 DIAPH1O60610 1272 aaKnown RBP25.06■■□□□ 1.6
NDUFB4-204ENST00000491335 PHKG2P15735 406 aa25.05■■□□□ 1.6
NDUFB4-204ENST00000491335 PLEKHO1Q53GL0 409 aaPredicted RBP25.05■■□□□ 1.6
NDUFB4-204ENST00000491335 IFNL2Q8IZJ0 200 aa25.05■■□□□ 1.6
NDUFB4-204ENST00000491335 ANO8Q9HCE9 1232 aaPredicted RBP25.05■■□□□ 1.6
NDUFB4-204ENST00000491335 KDRP35968 1356 aa25.04■■□□□ 1.6
NDUFB4-204ENST00000491335 PLEKHG2Q9H7P9 1386 aa25.04■■□□□ 1.6
NDUFB4-204ENST00000491335 MPRIPQ6WCQ1 1025 aa25.03■■□□□ 1.6
NDUFB4-204ENST00000491335 TOGARAM1Q9Y4F4 1720 aa25.03■■□□□ 1.6
NDUFB4-204ENST00000491335 ITGB4P16144 1822 aa25.02■■□□□ 1.6
NDUFB4-204ENST00000491335 HMOX1P09601 288 aa25.01■■□□□ 1.59
NDUFB4-204ENST00000491335 PPP2R1AP30153 589 aa25.01■■□□□ 1.59
NDUFB4-204ENST00000491335 AMOTQ4VCS5 1084 aa25.01■■□□□ 1.59
NDUFB4-204ENST00000491335 LRRC4BQ9NT99 713 aa25.01■■□□□ 1.59
NDUFB4-204ENST00000491335 DDX10Q13206 875 aaKnown RBP25■■□□□ 1.59
NDUFB4-204ENST00000491335 ZNF530Q6P9A1 599 aaPredicted RBP25■■□□□ 1.59
NDUFB4-204ENST00000491335 COL3A1P02461 1466 aaPredicted RBP25■■□□□ 1.59
NDUFB4-204ENST00000491335 STK32BQ9NY57 414 aa24.99■■□□□ 1.59
NDUFB4-204ENST00000491335 KCNQ4P56696 695 aa24.98■■□□□ 1.59
NDUFB4-204ENST00000491335 SLC27A3Q5K4L6 730 aa24.98■■□□□ 1.59
NDUFB4-204ENST00000491335 PIGBQ92521 554 aa24.98■■□□□ 1.59
NDUFB4-204ENST00000491335 SLC15A2Q16348 729 aa24.97■■□□□ 1.59
NDUFB4-204ENST00000491335 CFAP53Q96M91 514 aa24.97■■□□□ 1.59
NDUFB4-204ENST00000491335 LY75O60449 1722 aa24.97■■□□□ 1.59
NDUFB4-204ENST00000491335 U2SURPO15042 1029 aaKnown RBP24.96■■□□□ 1.59
NDUFB4-204ENST00000491335 SRCAPQ6ZRS2 3230 aa24.96■■□□□ 1.59
NDUFB4-204ENST00000491335 HSP90AB1P08238 724 aaKnown RBP24.94■■□□□ 1.58
NDUFB4-204ENST00000491335 DCAF5Q96JK2 942 aa24.94■■□□□ 1.58
NDUFB4-204ENST00000491335 TMOD3Q9NYL9 352 aa24.94■■□□□ 1.58
NDUFB4-204ENST00000491335 C1orf141Q5JVX7 400 aa24.93■■□□□ 1.58
NDUFB4-204ENST00000491335 PDGFDQ9GZP0 370 aaPredicted RBP24.93■■□□□ 1.58
NDUFB4-204ENST00000491335 CCNL1Q9UK58 526 aaPredicted RBP24.93■■□□□ 1.58
NDUFB4-204ENST00000491335 PAPPAQ13219 1627 aa24.93■■□□□ 1.58
NDUFB4-204ENST00000491335 PALLDQ8WX93 1383 aa24.92■■□□□ 1.58
NDUFB4-204ENST00000491335 ERVV-2B6SEH9 535 aa24.91■■□□□ 1.58
NDUFB4-204ENST00000491335 ZNF827Q17R98 1081 aa24.91■■□□□ 1.58
NDUFB4-204ENST00000491335 SMARCC1Q92922 1105 aaPredicted RBP24.91■■□□□ 1.58
NDUFB4-204ENST00000491335 LRP5O75197 1615 aa24.9■■□□□ 1.58
NDUFB4-204ENST00000491335 KDM6AO15550 1401 aaPredicted RBP24.9■■□□□ 1.58
NDUFB4-204ENST00000491335 AKT1S1Q96B36 256 aa24.89■■□□□ 1.58
NDUFB4-204ENST00000491335 ASAP1Q9ULH1 1129 aa24.89■■□□□ 1.58
NDUFB4-204ENST00000491335 NUDCQ9Y266 331 aa24.89■■□□□ 1.58
NDUFB4-204ENST00000491335 MTHFSDQ2M296 383 aaKnown RBP24.88■■□□□ 1.57
NDUFB4-204ENST00000491335 CASZ1Q86V15 1759 aa24.88■■□□□ 1.57
NDUFB4-204ENST00000491335 AKAP4Q5JQC9 854 aa24.87■■□□□ 1.57
NDUFB4-204ENST00000491335 CABP4P57796 275 aa24.86■■□□□ 1.57
NDUFB4-204ENST00000491335 ATG3Q9NT62 314 aa24.86■■□□□ 1.57
NDUFB4-204ENST00000491335 SPON1Q9HCB6 807 aa24.85■■□□□ 1.57
NDUFB4-204ENST00000491335 U2AF1L5P0DN76 240 aaPredicted RBP24.84■■□□□ 1.57
NDUFB4-204ENST00000491335 U2AF1Q01081 240 aaKnown RBP eCLIP24.84■■□□□ 1.57
NDUFB4-204ENST00000491335 RALBP1Q15311 655 aa24.84■■□□□ 1.57
NDUFB4-204ENST00000491335 SCN11AQ9UI33 1791 aa24.84■■□□□ 1.57
NDUFB4-204ENST00000491335 ZBTB7AO95365 584 aa24.83■■□□□ 1.57
NDUFB4-204ENST00000491335 NFATC2IPQ8NCF5 419 aa24.83■■□□□ 1.57
NDUFB4-204ENST00000491335 RSPH6AQ9H0K4 717 aa24.83■■□□□ 1.57
NDUFB4-204ENST00000491335 LGR6Q9HBX8 967 aa24.83■■□□□ 1.57
NDUFB4-204ENST00000491335 TFCP2L1Q9NZI6 479 aa24.83■■□□□ 1.57
NDUFB4-204ENST00000491335 TAF1LQ8IZX4 1826 aa24.83■■□□□ 1.57
NDUFB4-204ENST00000491335 LOC102724428A0A0B4J2F2 783 aa24.82■■□□□ 1.56
NDUFB4-204ENST00000491335 SIK1P57059 783 aa24.82■■□□□ 1.56
NDUFB4-204ENST00000491335 PRKAR2BP31323 418 aa24.81■■□□□ 1.56
NDUFB4-204ENST00000491335 PHACTR3Q96KR7 559 aa24.81■■□□□ 1.56
NDUFB4-204ENST00000491335 C5P01031 1676 aa24.81■■□□□ 1.56
NDUFB4-204ENST00000491335 VIRMAQ69YN4 1812 aaKnown RBP24.8■■□□□ 1.56
NDUFB4-204ENST00000491335 TUBGCP6Q96RT7 1819 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms