RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 SMG6Q86US8 1419 aaKnown RBP24.87■■□□□ 1.57
HMGN1-219ENST00000491183 MAP2P11137 1827 aaKnown RBP24.87■■□□□ 1.57
HMGN1-219ENST00000491183 PANK3Q9H999 370 aa24.87■■□□□ 1.57
HMGN1-219ENST00000491183 ANKRD26Q9UPS8 1709 aa24.84■■□□□ 1.57
HMGN1-219ENST00000491183 PPM1GO15355 546 aaPredicted RBP24.84■■□□□ 1.57
HMGN1-219ENST00000491183 POLKQ9UBT6 870 aa24.84■■□□□ 1.57
HMGN1-219ENST00000491183 RAPGEF4Q8WZA2 1011 aa24.83■■□□□ 1.57
HMGN1-219ENST00000491183 PDGFDQ9GZP0 370 aaPredicted RBP24.83■■□□□ 1.57
HMGN1-219ENST00000491183 WASHC2AQ641Q2 1341 aa24.83■■□□□ 1.56
HMGN1-219ENST00000491183 PRIM1P49642 420 aaKnown RBP24.82■■□□□ 1.56
HMGN1-219ENST00000491183 CASZ1Q86V15 1759 aa24.81■■□□□ 1.56
HMGN1-219ENST00000491183 TATP17735 454 aaPredicted RBP24.81■■□□□ 1.56
HMGN1-219ENST00000491183 SLC15A2Q16348 729 aa24.81■■□□□ 1.56
HMGN1-219ENST00000491183 SPON1Q9HCB6 807 aa24.8■■□□□ 1.56
HMGN1-219ENST00000491183 LRRC4BQ9NT99 713 aa24.8■■□□□ 1.56
HMGN1-219ENST00000491183 STK32BQ9NY57 414 aa24.8■■□□□ 1.56
HMGN1-219ENST00000491183 DOT1LQ8TEK3 1739 aa24.8■■□□□ 1.56
HMGN1-219ENST00000491183 TNNT2P45379 298 aaPredicted RBP24.79■■□□□ 1.56
HMGN1-219ENST00000491183 SYTL4Q96C24 671 aaPredicted RBP24.78■■□□□ 1.56
HMGN1-219ENST00000491183 NSD2O96028 1365 aa24.78■■□□□ 1.56
HMGN1-219ENST00000491183 NCAPD2Q15021 1401 aa24.77■■□□□ 1.56
HMGN1-219ENST00000491183 PAPPAQ13219 1627 aa24.76■■□□□ 1.55
HMGN1-219ENST00000491183 EYA1Q99502 592 aa24.76■■□□□ 1.55
HMGN1-219ENST00000491183 PCDH11XQ9BZA7 1347 aa24.73■■□□□ 1.55
HMGN1-219ENST00000491183 PCDH11YQ9BZA8 1340 aa24.73■■□□□ 1.55
HMGN1-219ENST00000491183 CYP27B1O15528 508 aa24.73■■□□□ 1.55
HMGN1-219ENST00000491183 KIF7Q2M1P5 1343 aa24.72■■□□□ 1.55
HMGN1-219ENST00000491183 ZBTB7AO95365 584 aa24.72■■□□□ 1.55
HMGN1-219ENST00000491183 EIF4A2Q14240 407 aaKnown RBP24.72■■□□□ 1.55
HMGN1-219ENST00000491183 ZNF827Q17R98 1081 aa24.72■■□□□ 1.55
HMGN1-219ENST00000491183 SLC27A3Q5K4L6 730 aa24.72■■□□□ 1.55
HMGN1-219ENST00000491183 KCNQ4P56696 695 aa24.71■■□□□ 1.55
HMGN1-219ENST00000491183 LY75O60449 1722 aa24.71■■□□□ 1.55
HMGN1-219ENST00000491183 PKD1L3Q7Z443 1732 aa24.71■■□□□ 1.55
HMGN1-219ENST00000491183 ATF5Q9Y2D1 282 aaPredicted RBP24.7■■□□□ 1.54
HMGN1-219ENST00000491183 AKT1S1Q96B36 256 aa24.69■■□□□ 1.54
HMGN1-219ENST00000491183 PPP1R1BQ9UD71 204 aaPredicted RBP24.69■■□□□ 1.54
HMGN1-219ENST00000491183 PTGER2P43116 358 aa24.68■■□□□ 1.54
HMGN1-219ENST00000491183 MORC1Q86VD1 984 aa24.68■■□□□ 1.54
HMGN1-219ENST00000491183 KNSTRNQ9Y448 316 aa24.68■■□□□ 1.54
HMGN1-219ENST00000491183 SPG7Q9UQ90 795 aa24.66■■□□□ 1.54
HMGN1-219ENST00000491183 NKX1-1Q15270 411 aaPredicted RBP24.65■■□□□ 1.54
HMGN1-219ENST00000491183 AMER1Q5JTC6 1135 aaPredicted RBP24.65■■□□□ 1.54
HMGN1-219ENST00000491183 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.65■■□□□ 1.54
HMGN1-219ENST00000491183 TOGARAM1Q9Y4F4 1720 aa24.65■■□□□ 1.54
HMGN1-219ENST00000491183 ITGB4P16144 1822 aa24.64■■□□□ 1.54
HMGN1-219ENST00000491183 MTFR1LQ9H019 292 aa24.64■■□□□ 1.54
HMGN1-219ENST00000491183 MPRIPQ6WCQ1 1025 aa24.63■■□□□ 1.53
HMGN1-219ENST00000491183 SGIP1Q9BQI5 828 aa24.63■■□□□ 1.53
HMGN1-219ENST00000491183 CCNL1Q9UK58 526 aaPredicted RBP24.63■■□□□ 1.53
HMGN1-219ENST00000491183 IGSF1Q8N6C5 1336 aa24.62■■□□□ 1.53
HMGN1-219ENST00000491183 PER1O15534 1290 aaPredicted RBP24.62■■□□□ 1.53
HMGN1-219ENST00000491183 QSER1Q2KHR3 1735 aa24.61■■□□□ 1.53
HMGN1-219ENST00000491183 TUBGCP6Q96RT7 1819 aa24.6■■□□□ 1.53
HMGN1-219ENST00000491183 PNPLA7Q6ZV29 1317 aa24.6■■□□□ 1.53
HMGN1-219ENST00000491183 PHKG2P15735 406 aa24.59■■□□□ 1.53
HMGN1-219ENST00000491183 PIGBQ92521 554 aa24.59■■□□□ 1.53
HMGN1-219ENST00000491183 IFNL2Q8IZJ0 200 aa24.58■■□□□ 1.53
HMGN1-219ENST00000491183 TFCP2L1Q9NZI6 479 aa24.58■■□□□ 1.53
HMGN1-219ENST00000491183 PALLDQ8WX93 1383 aa24.57■■□□□ 1.52
HMGN1-219ENST00000491183 SLC16A10Q8TF71 515 aa24.55■■□□□ 1.52
HMGN1-219ENST00000491183 PLEKHG2Q9H7P9 1386 aa24.54■■□□□ 1.52
HMGN1-219ENST00000491183 AEBP1Q8IUX7 1158 aa24.54■■□□□ 1.52
HMGN1-219ENST00000491183 IL13P35225 146 aa24.53■■□□□ 1.52
HMGN1-219ENST00000491183 SMARCC1Q92922 1105 aaPredicted RBP24.53■■□□□ 1.52
HMGN1-219ENST00000491183 TAF1LQ8IZX4 1826 aa24.53■■□□□ 1.52
HMGN1-219ENST00000491183 C5P01031 1676 aa24.53■■□□□ 1.52
HMGN1-219ENST00000491183 MTHFSP49914 203 aa24.52■■□□□ 1.52
HMGN1-219ENST00000491183 CC2D1BQ5T0F9 858 aaKnown RBP24.52■■□□□ 1.52
HMGN1-219ENST00000491183 ARXQ96QS3 562 aa24.52■■□□□ 1.52
HMGN1-219ENST00000491183 FHDC1Q9C0D6 1143 aaPredicted RBP24.52■■□□□ 1.52
HMGN1-219ENST00000491183 PLEKHO1Q53GL0 409 aaPredicted RBP24.51■■□□□ 1.51
HMGN1-219ENST00000491183 COL23A1Q86Y22 540 aaPredicted RBP24.51■■□□□ 1.51
HMGN1-219ENST00000491183 SYT17Q9BSW7 474 aa24.51■■□□□ 1.51
HMGN1-219ENST00000491183 TMOD3Q9NYL9 352 aa24.51■■□□□ 1.51
HMGN1-219ENST00000491183 COL24A1Q17RW2 1714 aa24.5■■□□□ 1.51
HMGN1-219ENST00000491183 SULT6B1Q6IMI4 303 aa24.5■■□□□ 1.51
HMGN1-219ENST00000491183 ASAP1Q9ULH1 1129 aa24.5■■□□□ 1.51
HMGN1-219ENST00000491183 AMOTQ4VCS5 1084 aa24.48■■□□□ 1.51
HMGN1-219ENST00000491183 KDRP35968 1356 aa24.47■■□□□ 1.51
HMGN1-219ENST00000491183 ATG3Q9NT62 314 aa24.47■■□□□ 1.51
HMGN1-219ENST00000491183 LOC102724428A0A0B4J2F2 783 aa24.46■■□□□ 1.51
HMGN1-219ENST00000491183 SIK1P57059 783 aa24.46■■□□□ 1.51
HMGN1-219ENST00000491183 ZNF530Q6P9A1 599 aaPredicted RBP24.46■■□□□ 1.51
HMGN1-219ENST00000491183 NPC1L1Q9UHC9 1359 aa24.45■■□□□ 1.5
HMGN1-219ENST00000491183 C4BP0C0L5 1744 aa24.45■■□□□ 1.5
HMGN1-219ENST00000491183 ERVV-2B6SEH9 535 aa24.45■■□□□ 1.5
HMGN1-219ENST00000491183 MSH5O43196 834 aa24.45■■□□□ 1.5
HMGN1-219ENST00000491183 HSP90AB1P08238 724 aaKnown RBP24.45■■□□□ 1.5
HMGN1-219ENST00000491183 HMGB2P26583 209 aaKnown RBP24.45■■□□□ 1.5
HMGN1-219ENST00000491183 DCAF5Q96JK2 942 aa24.45■■□□□ 1.5
HMGN1-219ENST00000491183 AMIGO3Q86WK7 504 aa24.44■■□□□ 1.5
HMGN1-219ENST00000491183 KDM6AO15550 1401 aaPredicted RBP24.44■■□□□ 1.5
HMGN1-219ENST00000491183 DCAF8L1A6NGE4 600 aa24.43■■□□□ 1.5
HMGN1-219ENST00000491183 CNGB1Q14028 1251 aaPredicted RBP24.43■■□□□ 1.5
HMGN1-219ENST00000491183 POLD1P28340 1107 aa24.42■■□□□ 1.5
HMGN1-219ENST00000491183 ITPK1Q13572 414 aa24.42■■□□□ 1.5
HMGN1-219ENST00000491183 SMIM5Q71RC9 77 aa24.42■■□□□ 1.5
HMGN1-219ENST00000491183 LINC00116Q8NCU8 138 aa24.42■■□□□ 1.5
HMGN1-219ENST00000491183 MAP3K5Q99683 1374 aa24.42■■□□□ 1.5
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