RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 CDC45O75419 566 aa23.87■■□□□ 1.41
SNAPC3-206ENST00000490969 PDLIM2Q96JY6 352 aa23.87■■□□□ 1.41
SNAPC3-206ENST00000490969 ZBTB7BO15156 539 aaPredicted RBP23.86■■□□□ 1.41
SNAPC3-206ENST00000490969 NUCB2P80303 420 aa23.86■■□□□ 1.41
SNAPC3-206ENST00000490969 MAP7D2Q96T17 732 aa23.86■■□□□ 1.41
SNAPC3-206ENST00000490969 KCNA6P17658 529 aa23.86■■□□□ 1.41
SNAPC3-206ENST00000490969 RBSNQ9H1K0 784 aa23.86■■□□□ 1.41
SNAPC3-206ENST00000490969 LMBRD1Q9NUN5 540 aa23.86■■□□□ 1.41
SNAPC3-206ENST00000490969 HDGFL2Q7Z4V5 671 aaPredicted RBP23.85■■□□□ 1.41
SNAPC3-206ENST00000490969 RBM33Q96EV2 1170 aaKnown RBP23.85■■□□□ 1.41
SNAPC3-206ENST00000490969 C1orf115Q9H7X2 142 aa23.85■■□□□ 1.41
SNAPC3-206ENST00000490969 RABEP1Q15276 862 aa23.85■■□□□ 1.41
SNAPC3-206ENST00000490969 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.85■■□□□ 1.41
SNAPC3-206ENST00000490969 ZRANB1Q9UGI0 708 aa23.85■■□□□ 1.41
SNAPC3-206ENST00000490969 FAM13BQ9NYF5 915 aa23.84■■□□□ 1.41
SNAPC3-206ENST00000490969 CYP2E1P05181 493 aaPredicted RBP23.84■■□□□ 1.41
SNAPC3-206ENST00000490969 CHMP4BQ9H444 224 aaKnown RBP23.84■■□□□ 1.41
SNAPC3-206ENST00000490969 BRPF1P55201 1214 aaPredicted RBP23.83■■□□□ 1.41
SNAPC3-206ENST00000490969 ATP7BP35670 1465 aa23.83■■□□□ 1.41
SNAPC3-206ENST00000490969 CCDC61Q9Y6R9 512 aa23.83■■□□□ 1.41
SNAPC3-206ENST00000490969 ANKLE2Q86XL3 938 aa23.82■■□□□ 1.4
SNAPC3-206ENST00000490969 ZNF142P52746 1687 aaPredicted RBP23.82■■□□□ 1.4
SNAPC3-206ENST00000490969 XPCQ01831 940 aaPredicted RBP23.82■■□□□ 1.4
SNAPC3-206ENST00000490969 CPSF1Q10570 1443 aaKnown RBP23.81■■□□□ 1.4
SNAPC3-206ENST00000490969 PRIM1P49642 420 aaKnown RBP23.81■■□□□ 1.4
SNAPC3-206ENST00000490969 SIRT2Q8IXJ6 389 aa23.81■■□□□ 1.4
SNAPC3-206ENST00000490969 UQCRHLA0A096LP55 91 aa23.8■■□□□ 1.4
SNAPC3-206ENST00000490969 UQCRHP07919 91 aa23.8■■□□□ 1.4
SNAPC3-206ENST00000490969 ZNF428Q96B54 188 aa23.8■■□□□ 1.4
SNAPC3-206ENST00000490969 PIK3R4Q99570 1358 aa23.8■■□□□ 1.4
SNAPC3-206ENST00000490969 PKP1Q13835 747 aa23.79■■□□□ 1.4
SNAPC3-206ENST00000490969 NME9Q86XW9 330 aa23.79■■□□□ 1.4
SNAPC3-206ENST00000490969 ZKSCAN5Q9Y2L8 839 aa23.79■■□□□ 1.4
SNAPC3-206ENST00000490969 GSPT1P15170 499 aaKnown RBP23.79■■□□□ 1.4
SNAPC3-206ENST00000490969 XRN1Q8IZH2 1706 aaKnown RBP23.77■■□□□ 1.4
SNAPC3-206ENST00000490969 PTCH1Q13635 1447 aa23.77■■□□□ 1.4
SNAPC3-206ENST00000490969 ARHGAP45Q92619 1136 aa23.77■■□□□ 1.4
SNAPC3-206ENST00000490969 PRDM4Q9UKN5 801 aa23.77■■□□□ 1.4
SNAPC3-206ENST00000490969 CSPP1Q1MSJ5 1256 aa23.76■■□□□ 1.39
SNAPC3-206ENST00000490969 PRPF40AO75400 957 aaKnown RBP23.76■■□□□ 1.39
SNAPC3-206ENST00000490969 MCM5P33992 734 aa23.76■■□□□ 1.39
SNAPC3-206ENST00000490969 MRPL50Q8N5N7 158 aaKnown RBP23.76■■□□□ 1.39
SNAPC3-206ENST00000490969 GPT2Q8TD30 523 aa23.76■■□□□ 1.39
SNAPC3-206ENST00000490969 CWC22Q9HCG8 908 aaKnown RBP23.76■■□□□ 1.39
SNAPC3-206ENST00000490969 RBM27Q9P2N5 1060 aaKnown RBP23.76■■□□□ 1.39
SNAPC3-206ENST00000490969 DIP2AQ14689 1571 aa23.75■■□□□ 1.39
SNAPC3-206ENST00000490969 CFAP44Q96MT7 982 aa23.75■■□□□ 1.39
SNAPC3-206ENST00000490969 CDC42BPGQ6DT37 1551 aa23.75■■□□□ 1.39
SNAPC3-206ENST00000490969 KIF20BQ96Q89 1820 aa23.75■■□□□ 1.39
SNAPC3-206ENST00000490969 DIAPH1O60610 1272 aaKnown RBP23.74■■□□□ 1.39
SNAPC3-206ENST00000490969 PLEKHM2Q8IWE5 1019 aa23.74■■□□□ 1.39
SNAPC3-206ENST00000490969 USP26Q9BXU7 913 aa23.74■■□□□ 1.39
SNAPC3-206ENST00000490969 RGPD8O14715 1765 aaPredicted RBP23.74■■□□□ 1.39
SNAPC3-206ENST00000490969 ANKRD26Q9UPS8 1709 aa23.74■■□□□ 1.39
SNAPC3-206ENST00000490969 DYNC1I1O14576 645 aa23.73■■□□□ 1.39
SNAPC3-206ENST00000490969 VAMP4O75379 141 aa23.73■■□□□ 1.39
SNAPC3-206ENST00000490969 MTERF4Q7Z6M4 381 aaKnown RBP23.73■■□□□ 1.39
SNAPC3-206ENST00000490969 ACEP12821 1306 aa23.73■■□□□ 1.39
SNAPC3-206ENST00000490969 LRSAM1Q6UWE0 723 aa23.72■■□□□ 1.39
SNAPC3-206ENST00000490969 ABCC4O15439 1325 aa23.72■■□□□ 1.39
SNAPC3-206ENST00000490969 TTC22Q5TAA0 569 aa23.71■■□□□ 1.39
SNAPC3-206ENST00000490969 CCDC39Q9UFE4 941 aa23.71■■□□□ 1.39
SNAPC3-206ENST00000490969 ZGPATQ8N5A5 531 aaKnown RBP23.71■■□□□ 1.39
SNAPC3-206ENST00000490969 EDC4Q6P2E9 1401 aaKnown RBP23.71■■□□□ 1.39
SNAPC3-206ENST00000490969 ZDHHC9Q9Y397 364 aa23.7■■□□□ 1.38
SNAPC3-206ENST00000490969 TMEM63CQ9P1W3 806 aa23.7■■□□□ 1.38
SNAPC3-206ENST00000490969 AKAP12Q02952 1782 aa23.7■■□□□ 1.38
SNAPC3-206ENST00000490969 CHD2O14647 1828 aaKnown RBP23.69■■□□□ 1.38
SNAPC3-206ENST00000490969 MON2Q7Z3U7 1717 aa23.69■■□□□ 1.38
SNAPC3-206ENST00000490969 TOPAZ1Q8N9V7 1692 aa23.69■■□□□ 1.38
SNAPC3-206ENST00000490969 LRRC7Q96NW7 1537 aa23.69■■□□□ 1.38
SNAPC3-206ENST00000490969 SYCE3A1L190 88 aa23.69■■□□□ 1.38
SNAPC3-206ENST00000490969 FCHSD2O94868 740 aa23.69■■□□□ 1.38
SNAPC3-206ENST00000490969 SASS6Q6UVJ0 657 aa23.69■■□□□ 1.38
SNAPC3-206ENST00000490969 PNPLA6Q8IY17 1366 aa23.68■■□□□ 1.38
SNAPC3-206ENST00000490969 ST18O60284 1047 aa23.68■■□□□ 1.38
SNAPC3-206ENST00000490969 INTS3Q68E01 1043 aaKnown RBP23.68■■□□□ 1.38
SNAPC3-206ENST00000490969 TSPYL6Q8N831 410 aa23.68■■□□□ 1.38
SNAPC3-206ENST00000490969 POLKQ9UBT6 870 aa23.67■■□□□ 1.38
SNAPC3-206ENST00000490969 PLEKHG3A1L390 1219 aa23.67■■□□□ 1.38
SNAPC3-206ENST00000490969 ITSN1Q15811 1721 aa23.67■■□□□ 1.38
SNAPC3-206ENST00000490969 NPHP4O75161 1426 aaPredicted RBP23.67■■□□□ 1.38
SNAPC3-206ENST00000490969 EMILIN1Q9Y6C2 1016 aa23.66■■□□□ 1.38
SNAPC3-206ENST00000490969 PRKAR2BP31323 418 aa23.66■■□□□ 1.38
SNAPC3-206ENST00000490969 DCTPP1Q9H773 170 aa23.66■■□□□ 1.38
SNAPC3-206ENST00000490969 SMAP1Q8IYB5 467 aaPredicted RBP23.65■■□□□ 1.38
SNAPC3-206ENST00000490969 NSFL1CQ9UNZ2 370 aaKnown RBP23.65■■□□□ 1.38
SNAPC3-206ENST00000490969 MAP2P11137 1827 aaKnown RBP23.65■■□□□ 1.38
SNAPC3-206ENST00000490969 CHAMP1Q96JM3 812 aa23.64■■□□□ 1.38
SNAPC3-206ENST00000490969 THUMPD2Q9BTF0 503 aaKnown RBP23.64■■□□□ 1.38
SNAPC3-206ENST00000490969 C16orf71Q8IYS4 520 aaPredicted RBP23.64■■□□□ 1.37
SNAPC3-206ENST00000490969 TTC21BQ7Z4L5 1316 aa23.63■■□□□ 1.37
SNAPC3-206ENST00000490969 ELL2O00472 640 aaPredicted RBP23.63■■□□□ 1.37
SNAPC3-206ENST00000490969 HSPA2P54652 639 aa23.63■■□□□ 1.37
SNAPC3-206ENST00000490969 RRS1Q15050 365 aaKnown RBP23.63■■□□□ 1.37
SNAPC3-206ENST00000490969 ARID3AQ99856 593 aa23.62■■□□□ 1.37
SNAPC3-206ENST00000490969 API5Q9BZZ5 524 aaKnown RBP23.62■■□□□ 1.37
SNAPC3-206ENST00000490969 MBD3O95983 291 aa23.62■■□□□ 1.37
SNAPC3-206ENST00000490969 RNF214Q8ND24 703 aa23.62■■□□□ 1.37
SNAPC3-206ENST00000490969 CASC1Q6TDU7 716 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms