RNA–Protein interactions for RNA: ENST00000490554.5

LMNB2-203, Transcript of lamin B2, humanhuman

TSL 2

Gene LMNB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-203ENST00000490554 NSD2O96028 1365 aa21.86■■□□□ 1.09
LMNB2-203ENST00000490554 GPR162Q16538 588 aa21.85■■□□□ 1.09
LMNB2-203ENST00000490554 CHD4Q14839 1912 aa21.84■■□□□ 1.09
LMNB2-203ENST00000490554 QSER1Q2KHR3 1735 aa21.83■■□□□ 1.09
LMNB2-203ENST00000490554 SLC24A1O60721 1099 aa21.83■■□□□ 1.09
LMNB2-203ENST00000490554 MEGF6O75095 1541 aa21.83■■□□□ 1.09
LMNB2-203ENST00000490554 KLHL34Q8N239 644 aa21.82■■□□□ 1.08
LMNB2-203ENST00000490554 COL24A1Q17RW2 1714 aa21.81■■□□□ 1.08
LMNB2-203ENST00000490554 RTL1A6NKG5 1358 aa21.81■■□□□ 1.08
LMNB2-203ENST00000490554 C1QTNF8P60827 252 aa21.8■■□□□ 1.08
LMNB2-203ENST00000490554 NBPF6Q5VWK0 638 aa21.8■■□□□ 1.08
LMNB2-203ENST00000490554 NBPF4Q96M43 638 aa21.8■■□□□ 1.08
LMNB2-203ENST00000490554 CCNL1Q9UK58 526 aaPredicted RBP21.8■■□□□ 1.08
LMNB2-203ENST00000490554 DOT1LQ8TEK3 1739 aa21.8■■□□□ 1.08
LMNB2-203ENST00000490554 RRS1Q15050 365 aaKnown RBP21.79■■□□□ 1.08
LMNB2-203ENST00000490554 LY75O60449 1722 aa21.78■■□□□ 1.08
LMNB2-203ENST00000490554 SHANK3Q9BYB0 1731 aa21.78■■□□□ 1.08
LMNB2-203ENST00000490554 FYB1O15117 783 aa21.78■■□□□ 1.08
LMNB2-203ENST00000490554 NLGN2Q8NFZ4 835 aa21.78■■□□□ 1.08
LMNB2-203ENST00000490554 CGNL1Q0VF96 1302 aa21.78■■□□□ 1.08
LMNB2-203ENST00000490554 TUBGCP6Q96RT7 1819 aa21.77■■□□□ 1.08
LMNB2-203ENST00000490554 RGPD2P0DJD1 1756 aa21.76■■□□□ 1.07
LMNB2-203ENST00000490554 USP47Q96K76 1375 aa21.76■■□□□ 1.07
LMNB2-203ENST00000490554 SENP3-EIF4A1A0A087X0R7 540 aa21.76■■□□□ 1.07
LMNB2-203ENST00000490554 COL23A1Q86Y22 540 aaPredicted RBP21.76■■□□□ 1.07
LMNB2-203ENST00000490554 PELP1Q8IZL8 1130 aaKnown RBP21.76■■□□□ 1.07
LMNB2-203ENST00000490554 USHBP1Q8N6Y0 703 aa21.76■■□□□ 1.07
LMNB2-203ENST00000490554 GGNBP2Q9H3C7 697 aa21.76■■□□□ 1.07
LMNB2-203ENST00000490554 RAPGEF4Q8WZA2 1011 aa21.75■■□□□ 1.07
LMNB2-203ENST00000490554 TATP17735 454 aaPredicted RBP21.73■■□□□ 1.07
LMNB2-203ENST00000490554 SMG6Q86US8 1419 aaKnown RBP21.72■■□□□ 1.07
LMNB2-203ENST00000490554 MSH5O43196 834 aa21.72■■□□□ 1.07
LMNB2-203ENST00000490554 TMF1P82094 1093 aa21.71■■□□□ 1.07
LMNB2-203ENST00000490554 HSP90AB2PQ58FF8 381 aa21.71■■□□□ 1.07
LMNB2-203ENST00000490554 INSRP06213 1382 aa21.71■■□□□ 1.07
LMNB2-203ENST00000490554 GOLGB1Q14789 3259 aaKnown RBP21.7■■□□□ 1.06
LMNB2-203ENST00000490554 YBX3P16989 372 aaKnown RBP eCLIP21.7■■□□□ 1.06
LMNB2-203ENST00000490554 PCDH11XQ9BZA7 1347 aa21.7■■□□□ 1.06
LMNB2-203ENST00000490554 PCDH11YQ9BZA8 1340 aa21.7■■□□□ 1.06
LMNB2-203ENST00000490554 GRIN3BO60391 1043 aa21.69■■□□□ 1.06
LMNB2-203ENST00000490554 GIGYF1O75420 1035 aaPredicted RBP21.69■■□□□ 1.06
LMNB2-203ENST00000490554 MSL1Q68DK7 614 aa21.69■■□□□ 1.06
LMNB2-203ENST00000490554 FLT4P35916 1363 aa21.68■■□□□ 1.06
LMNB2-203ENST00000490554 KIF24Q5T7B8 1368 aa21.68■■□□□ 1.06
LMNB2-203ENST00000490554 PALLDQ8WX93 1383 aa21.67■■□□□ 1.06
LMNB2-203ENST00000490554 HMGB2P26583 209 aaKnown RBP21.67■■□□□ 1.06
LMNB2-203ENST00000490554 CYP27B1O15528 508 aa21.66■■□□□ 1.06
LMNB2-203ENST00000490554 FLAD1Q8NFF5 587 aa21.66■■□□□ 1.06
LMNB2-203ENST00000490554 MPRIPQ6WCQ1 1025 aa21.65■■□□□ 1.06
LMNB2-203ENST00000490554 CD2APQ9Y5K6 639 aa21.64■■□□□ 1.05
LMNB2-203ENST00000490554 CDCA8Q53HL2 280 aa21.63■■□□□ 1.05
LMNB2-203ENST00000490554 C5P01031 1676 aa21.63■■□□□ 1.05
LMNB2-203ENST00000490554 SMARCC1Q92922 1105 aaPredicted RBP21.62■■□□□ 1.05
LMNB2-203ENST00000490554 CARD14Q9BXL6 1004 aa21.62■■□□□ 1.05
LMNB2-203ENST00000490554 EMILIN1Q9Y6C2 1016 aa21.62■■□□□ 1.05
LMNB2-203ENST00000490554 AMIGO3Q86WK7 504 aa21.6■■□□□ 1.05
LMNB2-203ENST00000490554 PIGBQ92521 554 aa21.6■■□□□ 1.05
LMNB2-203ENST00000490554 NCAPD2Q15021 1401 aa21.6■■□□□ 1.05
LMNB2-203ENST00000490554 NKX1-1Q15270 411 aaPredicted RBP21.59■■□□□ 1.05
LMNB2-203ENST00000490554 AK7Q96M32 723 aa21.59■■□□□ 1.05
LMNB2-203ENST00000490554 KIF20BQ96Q89 1820 aa21.59■■□□□ 1.05
LMNB2-203ENST00000490554 TAF1LQ8IZX4 1826 aa21.58■■□□□ 1.05
LMNB2-203ENST00000490554 TOGARAM1Q9Y4F4 1720 aa21.58■■□□□ 1.04
LMNB2-203ENST00000490554 NSD3Q9BZ95 1437 aa21.57■■□□□ 1.04
LMNB2-203ENST00000490554 C4BP0C0L5 1744 aa21.57■■□□□ 1.04
LMNB2-203ENST00000490554 ATP10DQ9P241 1426 aa21.56■■□□□ 1.04
LMNB2-203ENST00000490554 PKD1L3Q7Z443 1732 aa21.56■■□□□ 1.04
LMNB2-203ENST00000490554 SPG7Q9UQ90 795 aa21.56■■□□□ 1.04
LMNB2-203ENST00000490554 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.55■■□□□ 1.04
LMNB2-203ENST00000490554 PPM1GO15355 546 aaPredicted RBP21.55■■□□□ 1.04
LMNB2-203ENST00000490554 SMIM5Q71RC9 77 aa21.55■■□□□ 1.04
LMNB2-203ENST00000490554 WASHC2AQ641Q2 1341 aa21.55■■□□□ 1.04
LMNB2-203ENST00000490554 LOC102724428A0A0B4J2F2 783 aa21.54■■□□□ 1.04
LMNB2-203ENST00000490554 PHF14O94880 888 aa21.54■■□□□ 1.04
LMNB2-203ENST00000490554 SIK1P57059 783 aa21.54■■□□□ 1.04
LMNB2-203ENST00000490554 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.54■■□□□ 1.04
LMNB2-203ENST00000490554 ITGB4P16144 1822 aa21.53■■□□□ 1.04
LMNB2-203ENST00000490554 SSFA2P28290 1259 aa21.53■■□□□ 1.04
LMNB2-203ENST00000490554 LINC00116Q8NCU8 138 aa21.53■■□□□ 1.04
LMNB2-203ENST00000490554 EYA1Q99502 592 aa21.53■■□□□ 1.04
LMNB2-203ENST00000490554 ADCY9O60503 1353 aa21.52■■□□□ 1.04
LMNB2-203ENST00000490554 TMOD3Q9NYL9 352 aa21.51■■□□□ 1.03
LMNB2-203ENST00000490554 IGSF1Q8N6C5 1336 aa21.51■■□□□ 1.03
LMNB2-203ENST00000490554 UBR3Q6ZT12 1888 aa21.5■■□□□ 1.03
LMNB2-203ENST00000490554 GPBP1L1Q9HC44 474 aaPredicted RBP21.5■■□□□ 1.03
LMNB2-203ENST00000490554 ASAP1Q9ULH1 1129 aa21.5■■□□□ 1.03
LMNB2-203ENST00000490554 MAP2P11137 1827 aaKnown RBP21.5■■□□□ 1.03
LMNB2-203ENST00000490554 PHKG2P15735 406 aa21.49■■□□□ 1.03
LMNB2-203ENST00000490554 ITPK1Q13572 414 aa21.49■■□□□ 1.03
LMNB2-203ENST00000490554 POLKQ9UBT6 870 aa21.49■■□□□ 1.03
LMNB2-203ENST00000490554 ANKRD26Q9UPS8 1709 aa21.49■■□□□ 1.03
LMNB2-203ENST00000490554 IFNL2Q8IZJ0 200 aa21.48■■□□□ 1.03
LMNB2-203ENST00000490554 CEP350Q5VT06 3117 aa21.47■■□□□ 1.03
LMNB2-203ENST00000490554 GNPATO15228 680 aa21.47■■□□□ 1.03
LMNB2-203ENST00000490554 ATP6V1AP38606 617 aa21.47■■□□□ 1.03
LMNB2-203ENST00000490554 WWC3Q9ULE0 1092 aa21.47■■□□□ 1.03
LMNB2-203ENST00000490554 ATG3Q9NT62 314 aa21.46■■□□□ 1.03
LMNB2-203ENST00000490554 EIF4A2Q14240 407 aaKnown RBP21.44■■□□□ 1.02
LMNB2-203ENST00000490554 ZNF526Q8TF50 670 aaPredicted RBP21.44■■□□□ 1.02
LMNB2-203ENST00000490554 PLEKHG2Q9H7P9 1386 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms