RNA–Protein interactions for RNA: ENST00000490262.1

SREBF2-207, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 450 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-207ENST00000490262 LRRC4BQ9NT99 713 aa16.43■□□□□ 0.22
SREBF2-207ENST00000490262 PAPPAQ13219 1627 aa16.43■□□□□ 0.22
SREBF2-207ENST00000490262 INSRP06213 1382 aa16.42■□□□□ 0.22
SREBF2-207ENST00000490262 FLT4P35916 1363 aa16.42■□□□□ 0.22
SREBF2-207ENST00000490262 KIF24Q5T7B8 1368 aa16.42■□□□□ 0.22
SREBF2-207ENST00000490262 PRIM1P49642 420 aaKnown RBP16.42■□□□□ 0.22
SREBF2-207ENST00000490262 SYTL4Q96C24 671 aaPredicted RBP16.42■□□□□ 0.22
SREBF2-207ENST00000490262 NSD3Q9BZ95 1437 aa16.42■□□□□ 0.22
SREBF2-207ENST00000490262 CGNL1Q0VF96 1302 aa16.42■□□□□ 0.22
SREBF2-207ENST00000490262 DOT1LQ8TEK3 1739 aa16.42■□□□□ 0.22
SREBF2-207ENST00000490262 RAPGEF4Q8WZA2 1011 aa16.41■□□□□ 0.22
SREBF2-207ENST00000490262 MTFR1LQ9H019 292 aa16.41■□□□□ 0.22
SREBF2-207ENST00000490262 ZNF827Q17R98 1081 aa16.4■□□□□ 0.22
SREBF2-207ENST00000490262 SLC27A3Q5K4L6 730 aa16.4■□□□□ 0.22
SREBF2-207ENST00000490262 DCAF8L1A6NGE4 600 aa16.39■□□□□ 0.21
SREBF2-207ENST00000490262 EMILIN1Q9Y6C2 1016 aa16.39■□□□□ 0.21
SREBF2-207ENST00000490262 NSD2O96028 1365 aa16.38■□□□□ 0.21
SREBF2-207ENST00000490262 TATP17735 454 aaPredicted RBP16.38■□□□□ 0.21
SREBF2-207ENST00000490262 AKT1S1Q96B36 256 aa16.38■□□□□ 0.21
SREBF2-207ENST00000490262 SGIP1Q9BQI5 828 aa16.38■□□□□ 0.21
SREBF2-207ENST00000490262 LY75O60449 1722 aa16.37■□□□□ 0.21
SREBF2-207ENST00000490262 POLR3GLQ9BT43 218 aa16.37■□□□□ 0.21
SREBF2-207ENST00000490262 MAP2P11137 1827 aaKnown RBP16.36■□□□□ 0.21
SREBF2-207ENST00000490262 PPM1GO15355 546 aaPredicted RBP16.36■□□□□ 0.21
SREBF2-207ENST00000490262 KCNQ4P56696 695 aa16.36■□□□□ 0.21
SREBF2-207ENST00000490262 EIF4G2P78344 907 aaKnown RBP eCLIP16.35■□□□□ 0.21
SREBF2-207ENST00000490262 FHDC1Q9C0D6 1143 aaPredicted RBP16.35■□□□□ 0.21
SREBF2-207ENST00000490262 PCDH11XQ9BZA7 1347 aa16.35■□□□□ 0.21
SREBF2-207ENST00000490262 PCDH11YQ9BZA8 1340 aa16.35■□□□□ 0.21
SREBF2-207ENST00000490262 QSER1Q2KHR3 1735 aa16.34■□□□□ 0.21
SREBF2-207ENST00000490262 ANKRD26Q9UPS8 1709 aa16.34■□□□□ 0.21
SREBF2-207ENST00000490262 CCER1Q8TC90 406 aaPredicted RBP16.34■□□□□ 0.21
SREBF2-207ENST00000490262 SYT17Q9BSW7 474 aa16.34■□□□□ 0.21
SREBF2-207ENST00000490262 WASHC2AQ641Q2 1341 aa16.34■□□□□ 0.21
SREBF2-207ENST00000490262 HSPA5P11021 654 aaKnown RBP16.33■□□□□ 0.2
SREBF2-207ENST00000490262 YY1P25490 414 aa16.33■□□□□ 0.2
SREBF2-207ENST00000490262 SLC16A10Q8TF71 515 aa16.33■□□□□ 0.2
SREBF2-207ENST00000490262 ARXQ96QS3 562 aa16.33■□□□□ 0.2
SREBF2-207ENST00000490262 TFCP2L1Q9NZI6 479 aa16.33■□□□□ 0.2
SREBF2-207ENST00000490262 CCNL1Q9UK58 526 aaPredicted RBP16.33■□□□□ 0.2
SREBF2-207ENST00000490262 CYP27B1O15528 508 aa16.32■□□□□ 0.2
SREBF2-207ENST00000490262 PNPLA7Q6ZV29 1317 aa16.32■□□□□ 0.2
SREBF2-207ENST00000490262 POLKQ9UBT6 870 aa16.32■□□□□ 0.2
SREBF2-207ENST00000490262 TUBGCP6Q96RT7 1819 aa16.31■□□□□ 0.2
SREBF2-207ENST00000490262 NCAPD2Q15021 1401 aa16.31■□□□□ 0.2
SREBF2-207ENST00000490262 PKD1L3Q7Z443 1732 aa16.31■□□□□ 0.2
SREBF2-207ENST00000490262 EYA1Q99502 592 aa16.3■□□□□ 0.2
SREBF2-207ENST00000490262 TNNT2P45379 298 aaPredicted RBP16.29■□□□□ 0.2
SREBF2-207ENST00000490262 MPRIPQ6WCQ1 1025 aa16.29■□□□□ 0.2
SREBF2-207ENST00000490262 PANK3Q9H999 370 aa16.29■□□□□ 0.2
SREBF2-207ENST00000490262 ITGB4P16144 1822 aa16.29■□□□□ 0.2
SREBF2-207ENST00000490262 SPG7Q9UQ90 795 aa16.28■□□□□ 0.2
SREBF2-207ENST00000490262 COL24A1Q17RW2 1714 aa16.28■□□□□ 0.2
SREBF2-207ENST00000490262 TOGARAM1Q9Y4F4 1720 aa16.28■□□□□ 0.2
SREBF2-207ENST00000490262 MAP3K5Q99683 1374 aa16.27■□□□□ 0.2
SREBF2-207ENST00000490262 POLD1P28340 1107 aa16.27■□□□□ 0.2
SREBF2-207ENST00000490262 NKX1-1Q15270 411 aaPredicted RBP16.27■□□□□ 0.2
SREBF2-207ENST00000490262 PALLDQ8WX93 1383 aa16.26■□□□□ 0.19
SREBF2-207ENST00000490262 EIF4A2Q14240 407 aaKnown RBP16.26■□□□□ 0.19
SREBF2-207ENST00000490262 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.26■□□□□ 0.19
SREBF2-207ENST00000490262 C5P01031 1676 aa16.26■□□□□ 0.19
SREBF2-207ENST00000490262 TAF1LQ8IZX4 1826 aa16.25■□□□□ 0.19
SREBF2-207ENST00000490262 HMGB2P26583 209 aaKnown RBP16.25■□□□□ 0.19
SREBF2-207ENST00000490262 COL23A1Q86Y22 540 aaPredicted RBP16.25■□□□□ 0.19
SREBF2-207ENST00000490262 UTRNP46939 3433 aa16.25■□□□□ 0.19
SREBF2-207ENST00000490262 MSH5O43196 834 aa16.24■□□□□ 0.19
SREBF2-207ENST00000490262 PIGBQ92521 554 aa16.24■□□□□ 0.19
SREBF2-207ENST00000490262 SMARCC1Q92922 1105 aaPredicted RBP16.24■□□□□ 0.19
SREBF2-207ENST00000490262 IFNL2Q8IZJ0 200 aa16.23■□□□□ 0.19
SREBF2-207ENST00000490262 KLHL34Q8N239 644 aa16.23■□□□□ 0.19
SREBF2-207ENST00000490262 PHKG2P15735 406 aa16.22■□□□□ 0.19
SREBF2-207ENST00000490262 FLAD1Q8NFF5 587 aa16.21■□□□□ 0.19
SREBF2-207ENST00000490262 IGSF1Q8N6C5 1336 aa16.2■□□□□ 0.18
SREBF2-207ENST00000490262 CHD4Q14839 1912 aa16.2■□□□□ 0.18
SREBF2-207ENST00000490262 MORC1Q86VD1 984 aa16.2■□□□□ 0.18
SREBF2-207ENST00000490262 TMOD3Q9NYL9 352 aa16.2■□□□□ 0.18
SREBF2-207ENST00000490262 PLEKHG2Q9H7P9 1386 aa16.2■□□□□ 0.18
SREBF2-207ENST00000490262 C4BP0C0L5 1744 aa16.19■□□□□ 0.18
SREBF2-207ENST00000490262 KNSTRNQ9Y448 316 aa16.19■□□□□ 0.18
SREBF2-207ENST00000490262 LOC102724428A0A0B4J2F2 783 aa16.18■□□□□ 0.18
SREBF2-207ENST00000490262 SIK1P57059 783 aa16.18■□□□□ 0.18
SREBF2-207ENST00000490262 GPR162Q16538 588 aa16.18■□□□□ 0.18
SREBF2-207ENST00000490262 MSL1Q68DK7 614 aa16.18■□□□□ 0.18
SREBF2-207ENST00000490262 AK7Q96M32 723 aa16.18■□□□□ 0.18
SREBF2-207ENST00000490262 ASAP1Q9ULH1 1129 aa16.18■□□□□ 0.18
SREBF2-207ENST00000490262 NLGN2Q8NFZ4 835 aa16.17■□□□□ 0.18
SREBF2-207ENST00000490262 GOLGB1Q14789 3259 aaKnown RBP16.16■□□□□ 0.18
SREBF2-207ENST00000490262 UBR3Q6ZT12 1888 aa16.16■□□□□ 0.18
SREBF2-207ENST00000490262 PLEKHO1Q53GL0 409 aaPredicted RBP16.16■□□□□ 0.18
SREBF2-207ENST00000490262 AMIGO3Q86WK7 504 aa16.16■□□□□ 0.18
SREBF2-207ENST00000490262 PELP1Q8IZL8 1130 aaKnown RBP16.15■□□□□ 0.18
SREBF2-207ENST00000490262 LINC00116Q8NCU8 138 aa16.15■□□□□ 0.18
SREBF2-207ENST00000490262 ATG3Q9NT62 314 aa16.15■□□□□ 0.18
SREBF2-207ENST00000490262 KIF7Q2M1P5 1343 aa16.15■□□□□ 0.18
SREBF2-207ENST00000490262 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.14■□□□□ 0.17
SREBF2-207ENST00000490262 ERVV-2B6SEH9 535 aa16.14■□□□□ 0.17
SREBF2-207ENST00000490262 PHF14O94880 888 aa16.14■□□□□ 0.17
SREBF2-207ENST00000490262 HSP90AB1P08238 724 aaKnown RBP16.14■□□□□ 0.17
SREBF2-207ENST00000490262 ATP6V1AP38606 617 aa16.14■□□□□ 0.17
SREBF2-207ENST00000490262 ITPK1Q13572 414 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms