RNA–Protein interactions for RNA: ENST00000489764.1

SLC6A9-208, Transcript of solute carrier family 6 member 9, humanhuman

TSL 3

Gene SLC6A9, Length 930 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9-208ENST00000489764 SLC27A3Q5K4L6 730 aa25.87■■□□□ 1.73
SLC6A9-208ENST00000489764 CLSPNQ9HAW4 1339 aa25.87■■□□□ 1.73
SLC6A9-208ENST00000489764 INSRP06213 1382 aa25.86■■□□□ 1.73
SLC6A9-208ENST00000489764 AKT1S1Q96B36 256 aa25.86■■□□□ 1.73
SLC6A9-208ENST00000489764 RGPD2P0DJD1 1756 aa25.85■■□□□ 1.73
SLC6A9-208ENST00000489764 PAPPAQ13219 1627 aa25.85■■□□□ 1.73
SLC6A9-208ENST00000489764 KCNQ4P56696 695 aa25.84■■□□□ 1.73
SLC6A9-208ENST00000489764 RAPGEF4Q8WZA2 1011 aa25.84■■□□□ 1.73
SLC6A9-208ENST00000489764 CGNL1Q0VF96 1302 aa25.84■■□□□ 1.73
SLC6A9-208ENST00000489764 NSD2O96028 1365 aa25.83■■□□□ 1.73
SLC6A9-208ENST00000489764 DCAF8L1A6NGE4 600 aa25.83■■□□□ 1.73
SLC6A9-208ENST00000489764 NSD3Q9BZ95 1437 aa25.82■■□□□ 1.72
SLC6A9-208ENST00000489764 YY1P25490 414 aa25.82■■□□□ 1.72
SLC6A9-208ENST00000489764 FHDC1Q9C0D6 1143 aaPredicted RBP25.82■■□□□ 1.72
SLC6A9-208ENST00000489764 EMILIN1Q9Y6C2 1016 aa25.82■■□□□ 1.72
SLC6A9-208ENST00000489764 FLT4P35916 1363 aa25.82■■□□□ 1.72
SLC6A9-208ENST00000489764 KIF24Q5T7B8 1368 aa25.82■■□□□ 1.72
SLC6A9-208ENST00000489764 TATP17735 454 aaPredicted RBP25.81■■□□□ 1.72
SLC6A9-208ENST00000489764 SYT17Q9BSW7 474 aa25.81■■□□□ 1.72
SLC6A9-208ENST00000489764 SMG6Q86US8 1419 aaKnown RBP25.8■■□□□ 1.72
SLC6A9-208ENST00000489764 MYOM1P52179 1685 aa25.79■■□□□ 1.72
SLC6A9-208ENST00000489764 ARXQ96QS3 562 aa25.78■■□□□ 1.72
SLC6A9-208ENST00000489764 SHANK3Q9BYB0 1731 aa25.77■■□□□ 1.72
SLC6A9-208ENST00000489764 SLC16A10Q8TF71 515 aa25.76■■□□□ 1.71
SLC6A9-208ENST00000489764 PNPLA7Q6ZV29 1317 aa25.76■■□□□ 1.71
SLC6A9-208ENST00000489764 KIF20BQ96Q89 1820 aa25.75■■□□□ 1.71
SLC6A9-208ENST00000489764 PPM1GO15355 546 aaPredicted RBP25.75■■□□□ 1.71
SLC6A9-208ENST00000489764 TFCP2L1Q9NZI6 479 aa25.75■■□□□ 1.71
SLC6A9-208ENST00000489764 CCNL1Q9UK58 526 aaPredicted RBP25.75■■□□□ 1.71
SLC6A9-208ENST00000489764 CYP27B1O15528 508 aa25.74■■□□□ 1.71
SLC6A9-208ENST00000489764 WASHC2AQ641Q2 1341 aa25.73■■□□□ 1.71
SLC6A9-208ENST00000489764 PCDH11XQ9BZA7 1347 aa25.73■■□□□ 1.71
SLC6A9-208ENST00000489764 PCDH11YQ9BZA8 1340 aa25.73■■□□□ 1.71
SLC6A9-208ENST00000489764 POLR3GLQ9BT43 218 aa25.73■■□□□ 1.71
SLC6A9-208ENST00000489764 DOT1LQ8TEK3 1739 aa25.73■■□□□ 1.71
SLC6A9-208ENST00000489764 POLKQ9UBT6 870 aa25.71■■□□□ 1.71
SLC6A9-208ENST00000489764 HSPA5P11021 654 aaKnown RBP25.69■■□□□ 1.7
SLC6A9-208ENST00000489764 EIF4G2P78344 907 aaKnown RBP eCLIP25.69■■□□□ 1.7
SLC6A9-208ENST00000489764 EYA1Q99502 592 aa25.69■■□□□ 1.7
SLC6A9-208ENST00000489764 MPRIPQ6WCQ1 1025 aa25.68■■□□□ 1.7
SLC6A9-208ENST00000489764 LY75O60449 1722 aa25.68■■□□□ 1.7
SLC6A9-208ENST00000489764 UTRNP46939 3433 aa25.68■■□□□ 1.7
SLC6A9-208ENST00000489764 NCAPD2Q15021 1401 aa25.67■■□□□ 1.7
SLC6A9-208ENST00000489764 MAP3K5Q99683 1374 aa25.67■■□□□ 1.7
SLC6A9-208ENST00000489764 NKX1-1Q15270 411 aaPredicted RBP25.66■■□□□ 1.7
SLC6A9-208ENST00000489764 COL23A1Q86Y22 540 aaPredicted RBP25.66■■□□□ 1.7
SLC6A9-208ENST00000489764 POLD1P28340 1107 aa25.65■■□□□ 1.7
SLC6A9-208ENST00000489764 TNNT2P45379 298 aaPredicted RBP25.65■■□□□ 1.7
SLC6A9-208ENST00000489764 PANK3Q9H999 370 aa25.65■■□□□ 1.7
SLC6A9-208ENST00000489764 SPG7Q9UQ90 795 aa25.64■■□□□ 1.7
SLC6A9-208ENST00000489764 CCER1Q8TC90 406 aaPredicted RBP25.63■■□□□ 1.69
SLC6A9-208ENST00000489764 PIGBQ92521 554 aa25.63■■□□□ 1.69
SLC6A9-208ENST00000489764 QSER1Q2KHR3 1735 aa25.63■■□□□ 1.69
SLC6A9-208ENST00000489764 PALLDQ8WX93 1383 aa25.62■■□□□ 1.69
SLC6A9-208ENST00000489764 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.62■■□□□ 1.69
SLC6A9-208ENST00000489764 MSH5O43196 834 aa25.61■■□□□ 1.69
SLC6A9-208ENST00000489764 EIF4A2Q14240 407 aaKnown RBP25.61■■□□□ 1.69
SLC6A9-208ENST00000489764 SMARCC1Q92922 1105 aaPredicted RBP25.6■■□□□ 1.69
SLC6A9-208ENST00000489764 MAP2P11137 1827 aaKnown RBP25.59■■□□□ 1.69
SLC6A9-208ENST00000489764 TUBGCP6Q96RT7 1819 aa25.59■■□□□ 1.69
SLC6A9-208ENST00000489764 KLHL34Q8N239 644 aa25.59■■□□□ 1.69
SLC6A9-208ENST00000489764 ANKRD26Q9UPS8 1709 aa25.59■■□□□ 1.69
SLC6A9-208ENST00000489764 COL24A1Q17RW2 1714 aa25.57■■□□□ 1.68
SLC6A9-208ENST00000489764 HMGB2P26583 209 aaKnown RBP25.57■■□□□ 1.68
SLC6A9-208ENST00000489764 PHKG2P15735 406 aa25.56■■□□□ 1.68
SLC6A9-208ENST00000489764 IFNL2Q8IZJ0 200 aa25.56■■□□□ 1.68
SLC6A9-208ENST00000489764 PKD1L3Q7Z443 1732 aa25.56■■□□□ 1.68
SLC6A9-208ENST00000489764 GPR162Q16538 588 aa25.55■■□□□ 1.68
SLC6A9-208ENST00000489764 NLGN2Q8NFZ4 835 aa25.55■■□□□ 1.68
SLC6A9-208ENST00000489764 TOGARAM1Q9Y4F4 1720 aa25.54■■□□□ 1.68
SLC6A9-208ENST00000489764 MSL1Q68DK7 614 aa25.54■■□□□ 1.68
SLC6A9-208ENST00000489764 FLAD1Q8NFF5 587 aa25.54■■□□□ 1.68
SLC6A9-208ENST00000489764 AMIGO3Q86WK7 504 aa25.53■■□□□ 1.68
SLC6A9-208ENST00000489764 ZNF784Q8NCA9 323 aaPredicted RBP25.53■■□□□ 1.68
SLC6A9-208ENST00000489764 ASAP1Q9ULH1 1129 aa25.53■■□□□ 1.68
SLC6A9-208ENST00000489764 TMOD3Q9NYL9 352 aa25.52■■□□□ 1.68
SLC6A9-208ENST00000489764 IGSF1Q8N6C5 1336 aa25.52■■□□□ 1.68
SLC6A9-208ENST00000489764 LOC102724428A0A0B4J2F2 783 aa25.51■■□□□ 1.67
SLC6A9-208ENST00000489764 SIK1P57059 783 aa25.51■■□□□ 1.67
SLC6A9-208ENST00000489764 SMIM5Q71RC9 77 aa25.51■■□□□ 1.67
SLC6A9-208ENST00000489764 ITGB4P16144 1822 aa25.51■■□□□ 1.67
SLC6A9-208ENST00000489764 AK7Q96M32 723 aa25.5■■□□□ 1.67
SLC6A9-208ENST00000489764 C5P01031 1676 aa25.49■■□□□ 1.67
SLC6A9-208ENST00000489764 MORC1Q86VD1 984 aa25.49■■□□□ 1.67
SLC6A9-208ENST00000489764 LINC00116Q8NCU8 138 aa25.49■■□□□ 1.67
SLC6A9-208ENST00000489764 ATG3Q9NT62 314 aa25.48■■□□□ 1.67
SLC6A9-208ENST00000489764 GOLGB1Q14789 3259 aaKnown RBP25.48■■□□□ 1.67
SLC6A9-208ENST00000489764 ITPK1Q13572 414 aa25.47■■□□□ 1.67
SLC6A9-208ENST00000489764 PELP1Q8IZL8 1130 aaKnown RBP25.47■■□□□ 1.67
SLC6A9-208ENST00000489764 TAF1LQ8IZX4 1826 aa25.46■■□□□ 1.67
SLC6A9-208ENST00000489764 PLEKHG2Q9H7P9 1386 aa25.45■■□□□ 1.67
SLC6A9-208ENST00000489764 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.45■■□□□ 1.66
SLC6A9-208ENST00000489764 ATP6V1AP38606 617 aa25.45■■□□□ 1.66
SLC6A9-208ENST00000489764 PLEKHO1Q53GL0 409 aaPredicted RBP25.45■■□□□ 1.66
SLC6A9-208ENST00000489764 KNSTRNQ9Y448 316 aa25.45■■□□□ 1.66
SLC6A9-208ENST00000489764 C4BP0C0L5 1744 aa25.45■■□□□ 1.66
SLC6A9-208ENST00000489764 ERVV-2B6SEH9 535 aa25.44■■□□□ 1.66
SLC6A9-208ENST00000489764 PHF14O94880 888 aa25.44■■□□□ 1.66
SLC6A9-208ENST00000489764 YBX3P16989 372 aaKnown RBP eCLIP25.43■■□□□ 1.66
SLC6A9-208ENST00000489764 AEBP1Q8IUX7 1158 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms