RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 LY75O60449 1722 aa16.56■□□□□ 0.24
ACTN4-206ENST00000489451 FYB1O15117 783 aa16.55■□□□□ 0.24
ACTN4-206ENST00000489451 TRIM26Q12899 539 aaPredicted RBP16.55■□□□□ 0.24
ACTN4-206ENST00000489451 QSER1Q2KHR3 1735 aa16.55■□□□□ 0.24
ACTN4-206ENST00000489451 HSPA6P17066 643 aa16.54■□□□□ 0.24
ACTN4-206ENST00000489451 RRS1Q15050 365 aaKnown RBP16.54■□□□□ 0.24
ACTN4-206ENST00000489451 GGNBP2Q9H3C7 697 aa16.54■□□□□ 0.24
ACTN4-206ENST00000489451 COL24A1Q17RW2 1714 aa16.53■□□□□ 0.24
ACTN4-206ENST00000489451 RTL1A6NKG5 1358 aa16.53■□□□□ 0.24
ACTN4-206ENST00000489451 CAPN15O75808 1086 aa16.53■□□□□ 0.24
ACTN4-206ENST00000489451 NBPF6Q5VWK0 638 aa16.52■□□□□ 0.24
ACTN4-206ENST00000489451 DDX54Q8TDD1 881 aaKnown RBP16.52■□□□□ 0.24
ACTN4-206ENST00000489451 NBPF4Q96M43 638 aa16.52■□□□□ 0.24
ACTN4-206ENST00000489451 AMPHP49418 695 aa16.51■□□□□ 0.23
ACTN4-206ENST00000489451 TMF1P82094 1093 aa16.51■□□□□ 0.23
ACTN4-206ENST00000489451 PELP1Q8IZL8 1130 aaKnown RBP16.51■□□□□ 0.23
ACTN4-206ENST00000489451 AKT1S1Q96B36 256 aa16.51■□□□□ 0.23
ACTN4-206ENST00000489451 MTFR1LQ9H019 292 aa16.51■□□□□ 0.23
ACTN4-206ENST00000489451 SLC24A1O60721 1099 aa16.5■□□□□ 0.23
ACTN4-206ENST00000489451 USHBP1Q8N6Y0 703 aa16.5■□□□□ 0.23
ACTN4-206ENST00000489451 CARD14Q9BXL6 1004 aa16.5■□□□□ 0.23
ACTN4-206ENST00000489451 ANKRD26Q9UPS8 1709 aa16.5■□□□□ 0.23
ACTN4-206ENST00000489451 MAP3K5Q99683 1374 aa16.5■□□□□ 0.23
ACTN4-206ENST00000489451 KCNQ4P56696 695 aa16.49■□□□□ 0.23
ACTN4-206ENST00000489451 ARXQ96QS3 562 aa16.49■□□□□ 0.23
ACTN4-206ENST00000489451 TOGARAM1Q9Y4F4 1720 aa16.48■□□□□ 0.23
ACTN4-206ENST00000489451 PRIM1P49642 420 aaKnown RBP16.48■□□□□ 0.23
ACTN4-206ENST00000489451 HSP90AB2PQ58FF8 381 aa16.47■□□□□ 0.23
ACTN4-206ENST00000489451 ZCRB1Q8TBF4 217 aaKnown RBP16.47■□□□□ 0.23
ACTN4-206ENST00000489451 INSRP06213 1382 aa16.47■□□□□ 0.23
ACTN4-206ENST00000489451 PNPLA7Q6ZV29 1317 aa16.46■□□□□ 0.23
ACTN4-206ENST00000489451 NSD3Q9BZ95 1437 aa16.46■□□□□ 0.23
ACTN4-206ENST00000489451 PKD1L3Q7Z443 1732 aa16.46■□□□□ 0.23
ACTN4-206ENST00000489451 NCAPD2Q15021 1401 aa16.45■□□□□ 0.22
ACTN4-206ENST00000489451 SLC27A3Q5K4L6 730 aa16.45■□□□□ 0.22
ACTN4-206ENST00000489451 KLHL34Q8N239 644 aa16.45■□□□□ 0.22
ACTN4-206ENST00000489451 ATP10DQ9P241 1426 aa16.45■□□□□ 0.22
ACTN4-206ENST00000489451 FLT4P35916 1363 aa16.44■□□□□ 0.22
ACTN4-206ENST00000489451 SYTL4Q96C24 671 aaPredicted RBP16.44■□□□□ 0.22
ACTN4-206ENST00000489451 KIF24Q5T7B8 1368 aa16.43■□□□□ 0.22
ACTN4-206ENST00000489451 EMILIN1Q9Y6C2 1016 aa16.43■□□□□ 0.22
ACTN4-206ENST00000489451 ITGB4P16144 1822 aa16.42■□□□□ 0.22
ACTN4-206ENST00000489451 TAF1LQ8IZX4 1826 aa16.42■□□□□ 0.22
ACTN4-206ENST00000489451 GPBP1L1Q9HC44 474 aaPredicted RBP16.42■□□□□ 0.22
ACTN4-206ENST00000489451 C5P01031 1676 aa16.42■□□□□ 0.22
ACTN4-206ENST00000489451 SMG6Q86US8 1419 aaKnown RBP16.42■□□□□ 0.22
ACTN4-206ENST00000489451 MAP2P11137 1827 aaKnown RBP16.42■□□□□ 0.22
ACTN4-206ENST00000489451 CGNL1Q0VF96 1302 aa16.41■□□□□ 0.22
ACTN4-206ENST00000489451 GOLGB1Q14789 3259 aaKnown RBP16.4■□□□□ 0.22
ACTN4-206ENST00000489451 CYP27B1O15528 508 aa16.4■□□□□ 0.22
ACTN4-206ENST00000489451 CDCA8Q53HL2 280 aa16.4■□□□□ 0.22
ACTN4-206ENST00000489451 RAPGEF4Q8WZA2 1011 aa16.39■□□□□ 0.21
ACTN4-206ENST00000489451 SLC34A2O95436 690 aa16.38■□□□□ 0.21
ACTN4-206ENST00000489451 TATP17735 454 aaPredicted RBP16.38■□□□□ 0.21
ACTN4-206ENST00000489451 SLC16A10Q8TF71 515 aa16.38■□□□□ 0.21
ACTN4-206ENST00000489451 CCNL1Q9UK58 526 aaPredicted RBP16.38■□□□□ 0.21
ACTN4-206ENST00000489451 PCDH11XQ9BZA7 1347 aa16.38■□□□□ 0.21
ACTN4-206ENST00000489451 PCDH11YQ9BZA8 1340 aa16.38■□□□□ 0.21
ACTN4-206ENST00000489451 PRELPP51888 382 aa16.37■□□□□ 0.21
ACTN4-206ENST00000489451 TFCP2L1Q9NZI6 479 aa16.37■□□□□ 0.21
ACTN4-206ENST00000489451 TIMELESSQ9UNS1 1208 aa16.37■□□□□ 0.21
ACTN4-206ENST00000489451 COL13A1Q5TAT6 717 aaPredicted RBP16.36■□□□□ 0.21
ACTN4-206ENST00000489451 COL23A1Q86Y22 540 aaPredicted RBP16.36■□□□□ 0.21
ACTN4-206ENST00000489451 AMIGO3Q86WK7 504 aa16.35■□□□□ 0.21
ACTN4-206ENST00000489451 TNS4Q8IZW8 715 aa16.35■□□□□ 0.21
ACTN4-206ENST00000489451 ZNF526Q8TF50 670 aaPredicted RBP16.35■□□□□ 0.21
ACTN4-206ENST00000489451 C4BP0C0L5 1744 aa16.35■□□□□ 0.21
ACTN4-206ENST00000489451 WASHC2AQ641Q2 1341 aa16.35■□□□□ 0.21
ACTN4-206ENST00000489451 CLSPNQ9HAW4 1339 aa16.35■□□□□ 0.21
ACTN4-206ENST00000489451 PALLDQ8WX93 1383 aa16.35■□□□□ 0.21
ACTN4-206ENST00000489451 UBR3Q6ZT12 1888 aa16.34■□□□□ 0.21
ACTN4-206ENST00000489451 GRIN3BO60391 1043 aa16.34■□□□□ 0.21
ACTN4-206ENST00000489451 NLGN2Q8NFZ4 835 aa16.34■□□□□ 0.21
ACTN4-206ENST00000489451 EYA1Q99502 592 aa16.34■□□□□ 0.21
ACTN4-206ENST00000489451 POLKQ9UBT6 870 aa16.34■□□□□ 0.21
ACTN4-206ENST00000489451 APLP1P51693 650 aa16.33■□□□□ 0.2
ACTN4-206ENST00000489451 NKX1-1Q15270 411 aaPredicted RBP16.33■□□□□ 0.2
ACTN4-206ENST00000489451 MPRIPQ6WCQ1 1025 aa16.32■□□□□ 0.2
ACTN4-206ENST00000489451 PCGF6Q9BYE7 350 aa16.32■□□□□ 0.2
ACTN4-206ENST00000489451 PPM1GO15355 546 aaPredicted RBP16.31■□□□□ 0.2
ACTN4-206ENST00000489451 POLD1P28340 1107 aa16.31■□□□□ 0.2
ACTN4-206ENST00000489451 PIGBQ92521 554 aa16.31■□□□□ 0.2
ACTN4-206ENST00000489451 MSL1Q68DK7 614 aa16.3■□□□□ 0.2
ACTN4-206ENST00000489451 SMIM5Q71RC9 77 aa16.3■□□□□ 0.2
ACTN4-206ENST00000489451 WDR90Q96KV7 1748 aa16.29■□□□□ 0.2
ACTN4-206ENST00000489451 HSPA5P11021 654 aaKnown RBP16.29■□□□□ 0.2
ACTN4-206ENST00000489451 YBX3P16989 372 aaKnown RBP eCLIP16.29■□□□□ 0.2
ACTN4-206ENST00000489451 EIF4A2Q14240 407 aaKnown RBP16.29■□□□□ 0.2
ACTN4-206ENST00000489451 ADCY9O60503 1353 aa16.27■□□□□ 0.2
ACTN4-206ENST00000489451 POLR3GLQ9BT43 218 aa16.27■□□□□ 0.2
ACTN4-206ENST00000489451 PHKG2P15735 406 aa16.26■□□□□ 0.19
ACTN4-206ENST00000489451 TNNT2P45379 298 aaPredicted RBP16.26■□□□□ 0.19
ACTN4-206ENST00000489451 LINC00116Q8NCU8 138 aa16.26■□□□□ 0.19
ACTN4-206ENST00000489451 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.26■□□□□ 0.19
ACTN4-206ENST00000489451 IGSF1Q8N6C5 1336 aa16.25■□□□□ 0.19
ACTN4-206ENST00000489451 MSH5O43196 834 aa16.25■□□□□ 0.19
ACTN4-206ENST00000489451 ITPK1Q13572 414 aa16.25■□□□□ 0.19
ACTN4-206ENST00000489451 DNAJC5GQ8N7S2 189 aa16.25■□□□□ 0.19
ACTN4-206ENST00000489451 PANK3Q9H999 370 aa16.25■□□□□ 0.19
ACTN4-206ENST00000489451 ASAP1Q9ULH1 1129 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms