RNA–Protein interactions for RNA: ENST00000489390.1

SHOC2-205, Transcript of SHOC2, leucine rich repeat scaffold protein, humanhuman

TSL 5

Gene SHOC2, Length 815 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOC2-205ENST00000489390 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.43■□□□□ 0.865e-7■□□□□ 10.5
SHOC2-205ENST00000489390 CCNL1Q9UK58 526 aaPredicted RBP20.43■□□□□ 0.86
SHOC2-205ENST00000489390 NME9Q86XW9 330 aa20.41■□□□□ 0.86
SHOC2-205ENST00000489390 C5P01031 1676 aa20.41■□□□□ 0.86
SHOC2-205ENST00000489390 ZNF526Q8TF50 670 aaPredicted RBP20.4■□□□□ 0.86
SHOC2-205ENST00000489390 SBNO2Q9Y2G9 1366 aa20.39■□□□□ 0.85
SHOC2-205ENST00000489390 MSL1Q68DK7 614 aa20.39■□□□□ 0.85
SHOC2-205ENST00000489390 CD163L1Q9NR16 1453 aa20.38■□□□□ 0.85
SHOC2-205ENST00000489390 TAF1LQ8IZX4 1826 aa20.37■□□□□ 0.85
SHOC2-205ENST00000489390 IP6K1Q92551 441 aa20.37■□□□□ 0.85
SHOC2-205ENST00000489390 USP47Q96K76 1375 aa20.36■□□□□ 0.85
SHOC2-205ENST00000489390 HMGB2P26583 209 aaKnown RBP20.36■□□□□ 0.85
SHOC2-205ENST00000489390 FLAD1Q8NFF5 587 aa20.35■□□□□ 0.85
SHOC2-205ENST00000489390 RGPD2P0DJD1 1756 aa20.35■□□□□ 0.85
SHOC2-205ENST00000489390 KIF3CO14782 793 aa20.34■□□□□ 0.85
SHOC2-205ENST00000489390 APLP1P51693 650 aa20.34■□□□□ 0.85
SHOC2-205ENST00000489390 ZCRB1Q8TBF4 217 aaKnown RBP20.34■□□□□ 0.85
SHOC2-205ENST00000489390 EDC4Q6P2E9 1401 aaKnown RBP20.34■□□□□ 0.85
SHOC2-205ENST00000489390 ROCK2O75116 1388 aaKnown RBP20.33■□□□□ 0.84
SHOC2-205ENST00000489390 HDGFL2Q7Z4V5 671 aaPredicted RBP20.32■□□□□ 0.84
SHOC2-205ENST00000489390 LTV1Q96GA3 475 aaPredicted RBP20.32■□□□□ 0.84
SHOC2-205ENST00000489390 L3MBTL2Q969R5 705 aa20.31■□□□□ 0.84
SHOC2-205ENST00000489390 IGSF1Q8N6C5 1336 aa20.3■□□□□ 0.84
SHOC2-205ENST00000489390 MEGF6O75095 1541 aa20.3■□□□□ 0.84
SHOC2-205ENST00000489390 CICQ96RK0 1608 aaPredicted RBP20.3■□□□□ 0.84
SHOC2-205ENST00000489390 C4BP0C0L5 1744 aa20.28■□□□□ 0.84
SHOC2-205ENST00000489390 DNAJC5GQ8N7S2 189 aa20.28■□□□□ 0.84
SHOC2-205ENST00000489390 TMC1Q8TDI8 760 aa20.28■□□□□ 0.84
SHOC2-205ENST00000489390 UBR3Q6ZT12 1888 aa20.28■□□□□ 0.84
SHOC2-205ENST00000489390 TOGARAM1Q9Y4F4 1720 aa20.27■□□□□ 0.84
SHOC2-205ENST00000489390 TERF2IPQ9NYB0 399 aa20.26■□□□□ 0.83
SHOC2-205ENST00000489390 CGNL1Q0VF96 1302 aa20.26■□□□□ 0.83
SHOC2-205ENST00000489390 A0A1W2PP64 1363 aa20.25■□□□□ 0.83
SHOC2-205ENST00000489390 TOMM70O94826 608 aa20.25■□□□□ 0.83
SHOC2-205ENST00000489390 HOXC9P31274 260 aa20.25■□□□□ 0.83
SHOC2-205ENST00000489390 SLC12A5Q9H2X9 1139 aa20.25■□□□□ 0.83
SHOC2-205ENST00000489390 WDR90Q96KV7 1748 aa20.24■□□□□ 0.83
SHOC2-205ENST00000489390 PALLDQ8WX93 1383 aa20.24■□□□□ 0.83
SHOC2-205ENST00000489390 WWC3Q9ULE0 1092 aa20.24■□□□□ 0.83
SHOC2-205ENST00000489390 MAP3K19Q56UN5 1328 aa20.24■□□□□ 0.83
SHOC2-205ENST00000489390 NSD3Q9BZ95 1437 aa20.23■□□□□ 0.83
SHOC2-205ENST00000489390 ITGB4P16144 1822 aa20.23■□□□□ 0.83
SHOC2-205ENST00000489390 AMPHP49418 695 aa20.22■□□□□ 0.83
SHOC2-205ENST00000489390 AK7Q96M32 723 aa20.22■□□□□ 0.83
SHOC2-205ENST00000489390 KIF13BQ9NQT8 1826 aa20.2■□□□□ 0.82
SHOC2-205ENST00000489390 RTL1A6NKG5 1358 aa20.2■□□□□ 0.82
SHOC2-205ENST00000489390 NBPF6Q5VWK0 638 aa20.19■□□□□ 0.82
SHOC2-205ENST00000489390 AMIGO3Q86WK7 504 aa20.19■□□□□ 0.82
SHOC2-205ENST00000489390 RAPGEF4Q8WZA2 1011 aa20.19■□□□□ 0.82
SHOC2-205ENST00000489390 COG3Q96JB2 828 aa20.19■□□□□ 0.82
SHOC2-205ENST00000489390 NBPF4Q96M43 638 aa20.19■□□□□ 0.82
SHOC2-205ENST00000489390 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.18■□□□□ 0.82
SHOC2-205ENST00000489390 SMARCC1Q92922 1105 aaPredicted RBP20.18■□□□□ 0.82
SHOC2-205ENST00000489390 PUS7Q96PZ0 661 aaKnown RBP20.18■□□□□ 0.82
SHOC2-205ENST00000489390 PCDH11XQ9BZA7 1347 aa20.18■□□□□ 0.82
SHOC2-205ENST00000489390 PCDH11YQ9BZA8 1340 aa20.18■□□□□ 0.82
SHOC2-205ENST00000489390 KIAA1551Q9HCM1 1747 aa20.18■□□□□ 0.82
SHOC2-205ENST00000489390 PHF14O94880 888 aa20.17■□□□□ 0.82
SHOC2-205ENST00000489390 SSFA2P28290 1259 aa20.17■□□□□ 0.82
SHOC2-205ENST00000489390 MPRIPQ6WCQ1 1025 aa20.17■□□□□ 0.82
SHOC2-205ENST00000489390 MAP2P11137 1827 aaKnown RBP20.17■□□□□ 0.82
SHOC2-205ENST00000489390 TATP17735 454 aaPredicted RBP20.16■□□□□ 0.82
SHOC2-205ENST00000489390 N4BP2Q86UW6 1770 aaPredicted RBP20.16■□□□□ 0.82
SHOC2-205ENST00000489390 FBLN1P23142 703 aa20.15■□□□□ 0.82
SHOC2-205ENST00000489390 COL13A1Q5TAT6 717 aaPredicted RBP20.15■□□□□ 0.82
SHOC2-205ENST00000489390 JMYQ8N9B5 988 aa20.15■□□□□ 0.82
SHOC2-205ENST00000489390 SMG6Q86US8 1419 aaKnown RBP20.15■□□□□ 0.82
SHOC2-205ENST00000489390 PXDNLA1KZ92 1463 aa20.14■□□□□ 0.81
SHOC2-205ENST00000489390 USHBP1Q8N6Y0 703 aa20.14■□□□□ 0.81
SHOC2-205ENST00000489390 RBM46Q8TBY0 533 aaKnown RBP20.14■□□□□ 0.81
SHOC2-205ENST00000489390 KLRG1Q96E93 195 aa20.14■□□□□ 0.81
SHOC2-205ENST00000489390 NMRK2Q9NPI5 230 aa20.13■□□□□ 0.81
SHOC2-205ENST00000489390 SMIM5Q71RC9 77 aa20.12■□□□□ 0.81
SHOC2-205ENST00000489390 PKD1L3Q7Z443 1732 aa20.12■□□□□ 0.81
SHOC2-205ENST00000489390 BRCA1P38398 1863 aaKnown RBP20.11■□□□□ 0.81
SHOC2-205ENST00000489390 TGFB2P61812 414 aa20.11■□□□□ 0.81
SHOC2-205ENST00000489390 SIN3AQ96ST3 1273 aa20.11■□□□□ 0.81
SHOC2-205ENST00000489390 CARD11Q9BXL7 1154 aa20.11■□□□□ 0.81
SHOC2-205ENST00000489390 CYP27B1O15528 508 aa20.1■□□□□ 0.81
SHOC2-205ENST00000489390 BCS1LQ9Y276 419 aa20.1■□□□□ 0.81
SHOC2-205ENST00000489390 MMP10P09238 476 aa20.09■□□□□ 0.81
SHOC2-205ENST00000489390 FSTL1Q12841 308 aa20.09■□□□□ 0.81
SHOC2-205ENST00000489390 RRS1Q15050 365 aaKnown RBP20.09■□□□□ 0.81
SHOC2-205ENST00000489390 LINC00116Q8NCU8 138 aa20.09■□□□□ 0.81
SHOC2-205ENST00000489390 PIGBQ92521 554 aa20.09■□□□□ 0.81
SHOC2-205ENST00000489390 ARFGEF1Q9Y6D6 1849 aa20.09■□□□□ 0.81
SHOC2-205ENST00000489390 LOC102724428A0A0B4J2F2 783 aa20.08■□□□□ 0.81
SHOC2-205ENST00000489390 CAPN15O75808 1086 aa20.08■□□□□ 0.81
SHOC2-205ENST00000489390 PRELPP51888 382 aa20.08■□□□□ 0.81
SHOC2-205ENST00000489390 SIK1P57059 783 aa20.08■□□□□ 0.81
SHOC2-205ENST00000489390 ARHGAP27Q6ZUM4 889 aa20.08■□□□□ 0.81
SHOC2-205ENST00000489390 C16orf71Q8IYS4 520 aaPredicted RBP20.08■□□□□ 0.81
SHOC2-205ENST00000489390 TNS4Q8IZW8 715 aa20.07■□□□□ 0.8
SHOC2-205ENST00000489390 C10orf71Q711Q0 1435 aa20.07■□□□□ 0.8
SHOC2-205ENST00000489390 INSRP06213 1382 aa20.07■□□□□ 0.8
SHOC2-205ENST00000489390 PLEKHG2Q9H7P9 1386 aa20.07■□□□□ 0.8
SHOC2-205ENST00000489390 GNPATO15228 680 aa20.06■□□□□ 0.8
SHOC2-205ENST00000489390 HTRA3P83110 453 aa20.06■□□□□ 0.8
SHOC2-205ENST00000489390 NEUROD1Q13562 356 aa20.06■□□□□ 0.8
SHOC2-205ENST00000489390 A0A0G2JLW4 131 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms