RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 ANKRD30BQ9BXX2 1392 aa9.37□□□□□ -0.91
PDCD4-209ENST00000489049 SNRPBP14678 240 aaKnown RBP9.36□□□□□ -0.91
PDCD4-209ENST00000489049 SH3BP2P78314 561 aa9.36□□□□□ -0.91
PDCD4-209ENST00000489049 MTMR2Q13614 643 aa9.36□□□□□ -0.91
PDCD4-209ENST00000489049 UNC93B1Q9H1C4 597 aa9.36□□□□□ -0.91
PDCD4-209ENST00000489049 EVA1BQ9NVM1 165 aa9.36□□□□□ -0.91
PDCD4-209ENST00000489049 KDM5DQ9BY66 1539 aa9.36□□□□□ -0.91
PDCD4-209ENST00000489049 RPRD2Q5VT52 1461 aaKnown RBP9.35□□□□□ -0.91
PDCD4-209ENST00000489049 SPDYE5A6NIY4 337 aa9.35□□□□□ -0.91
PDCD4-209ENST00000489049 NFX1Q12986 1120 aaKnown RBP9.35□□□□□ -0.91
PDCD4-209ENST00000489049 DESI1Q6ICB0 168 aa9.35□□□□□ -0.91
PDCD4-209ENST00000489049 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.35□□□□□ -0.91
PDCD4-209ENST00000489049 GJA5P36382 358 aa9.34□□□□□ -0.91
PDCD4-209ENST00000489049 KCNH2Q12809 1159 aa9.34□□□□□ -0.91
PDCD4-209ENST00000489049 PARP9Q8IXQ6 854 aa9.34□□□□□ -0.91
PDCD4-209ENST00000489049 ARHGAP5Q13017 1502 aa9.34□□□□□ -0.91
PDCD4-209ENST00000489049 KIF15Q9NS87 1388 aa9.34□□□□□ -0.91
PDCD4-209ENST00000489049 MYO5CQ9NQX4 1742 aa9.34□□□□□ -0.92
PDCD4-209ENST00000489049 RTEL1-TNFRSF6BF6WH68 1400 aa9.33□□□□□ -0.92
PDCD4-209ENST00000489049 RSBN1LQ6PCB5 846 aaPredicted RBP9.33□□□□□ -0.92
PDCD4-209ENST00000489049 KIFC2Q96AC6 838 aa9.33□□□□□ -0.92
PDCD4-209ENST00000489049 TBC1D2Q9BYX2 928 aa9.33□□□□□ -0.92
PDCD4-209ENST00000489049 ZCCHC11Q5TAX3 1644 aaKnown RBP9.33□□□□□ -0.92
PDCD4-209ENST00000489049 ERCC6L2Q5T890 1561 aa9.33□□□□□ -0.92
PDCD4-209ENST00000489049 CDC42BPBQ9Y5S2 1711 aa9.32□□□□□ -0.92
PDCD4-209ENST00000489049 TRIM66O15016 1216 aa9.32□□□□□ -0.92
PDCD4-209ENST00000489049 DIXDC1Q155Q3 683 aa9.32□□□□□ -0.92
PDCD4-209ENST00000489049 LINC01559Q495D7 138 aa9.32□□□□□ -0.92
PDCD4-209ENST00000489049 WASF2Q9Y6W5 498 aa9.32□□□□□ -0.92
PDCD4-209ENST00000489049 DENND4BO75064 1496 aaPredicted RBP9.32□□□□□ -0.92
PDCD4-209ENST00000489049 PZPP20742 1482 aa9.32□□□□□ -0.92
PDCD4-209ENST00000489049 WDR7Q9Y4E6 1490 aa9.32□□□□□ -0.92
PDCD4-209ENST00000489049 PLXNC1O60486 1568 aa9.32□□□□□ -0.92
PDCD4-209ENST00000489049 SAMD9LQ8IVG5 1584 aa9.32□□□□□ -0.92
PDCD4-209ENST00000489049 HNRNPMP52272 730 aaKnown RBP eCLIP9.31□□□□□ -0.92
PDCD4-209ENST00000489049 BAP1Q92560 729 aa9.31□□□□□ -0.92
PDCD4-209ENST00000489049 KDM6BO15054 1643 aa9.31□□□□□ -0.92
PDCD4-209ENST00000489049 TTC37Q6PGP7 1564 aa9.3□□□□□ -0.92
PDCD4-209ENST00000489049 NUP155O75694 1391 aa9.3□□□□□ -0.92
PDCD4-209ENST00000489049 ZNF511Q8NB15 262 aa9.3□□□□□ -0.92
PDCD4-209ENST00000489049 DUOX2Q9NRD8 1548 aa9.3□□□□□ -0.92
PDCD4-209ENST00000489049 ERBINQ96RT1 1412 aa9.3□□□□□ -0.92
PDCD4-209ENST00000489049 TERTO14746 1132 aaKnown RBP9.29□□□□□ -0.92
PDCD4-209ENST00000489049 SPTLC1O15269 473 aa9.29□□□□□ -0.92
PDCD4-209ENST00000489049 PCDHB15Q9Y5E8 787 aa9.29□□□□□ -0.92
PDCD4-209ENST00000489049 TLL2Q9Y6L7 1015 aa9.29□□□□□ -0.92
PDCD4-209ENST00000489049 CAPN5O15484 640 aaPredicted RBP9.28□□□□□ -0.92
PDCD4-209ENST00000489049 LYPD8Q6UX82 237 aa9.28□□□□□ -0.92
PDCD4-209ENST00000489049 AK7Q96M32 723 aa9.28□□□□□ -0.92
PDCD4-209ENST00000489049 DISP3Q9P2K9 1392 aa9.27□□□□□ -0.93
PDCD4-209ENST00000489049 SYCP2Q9BX26 1530 aa9.27□□□□□ -0.93
PDCD4-209ENST00000489049 ARHGEF12Q9NZN5 1544 aa9.27□□□□□ -0.93
PDCD4-209ENST00000489049 CFAP99D6REC4 459 aa9.27□□□□□ -0.93
PDCD4-209ENST00000489049 WIPF1O43516 503 aa9.27□□□□□ -0.93
PDCD4-209ENST00000489049 BMP1P13497 986 aa9.27□□□□□ -0.93
PDCD4-209ENST00000489049 VARSP26640 1264 aaKnown RBP9.27□□□□□ -0.93
PDCD4-209ENST00000489049 EIF4G2P78344 907 aaKnown RBP eCLIP9.27□□□□□ -0.93
PDCD4-209ENST00000489049 LCE2CQ5TA81 110 aa9.27□□□□□ -0.93
PDCD4-209ENST00000489049 TRIM46Q7Z4K8 759 aa9.27□□□□□ -0.93
PDCD4-209ENST00000489049 L3MBTL2Q969R5 705 aa9.27□□□□□ -0.93
PDCD4-209ENST00000489049 ZBTB3Q9H5J0 574 aa9.27□□□□□ -0.93
PDCD4-209ENST00000489049 ABCA9Q8IUA7 1624 aa9.27□□□□□ -0.93
PDCD4-209ENST00000489049 ABCC1P33527 1531 aa9.26□□□□□ -0.93
PDCD4-209ENST00000489049 CTHP32929 405 aa9.26□□□□□ -0.93
PDCD4-209ENST00000489049 MPNDQ8N594 471 aa9.26□□□□□ -0.93
PDCD4-209ENST00000489049 SPAG9O60271 1321 aaKnown RBP9.26□□□□□ -0.93
PDCD4-209ENST00000489049 ARID4BQ4LE39 1312 aaPredicted RBP9.26□□□□□ -0.93
PDCD4-209ENST00000489049 UNC13BO14795 1591 aa9.25□□□□□ -0.93
PDCD4-209ENST00000489049 PLEKHG3A1L390 1219 aa9.25□□□□□ -0.93
PDCD4-209ENST00000489049 PRPF38BQ5VTL8 546 aaKnown RBP9.25□□□□□ -0.93
PDCD4-209ENST00000489049 RIC3Q7Z5B4 369 aa9.25□□□□□ -0.93
PDCD4-209ENST00000489049 ATP10AO60312 1499 aa9.25□□□□□ -0.93
PDCD4-209ENST00000489049 TEX14Q8IWB6 1497 aa9.25□□□□□ -0.93
PDCD4-209ENST00000489049 UHRF1BP1Q6BDS2 1440 aa9.24□□□□□ -0.93
PDCD4-209ENST00000489049 ASXL2Q76L83 1435 aa9.24□□□□□ -0.93
PDCD4-209ENST00000489049 MAGI2Q86UL8 1455 aa9.24□□□□□ -0.93
PDCD4-209ENST00000489049 CCER2I3L3R5 266 aa9.24□□□□□ -0.93
PDCD4-209ENST00000489049 F12P00748 615 aaPredicted RBP9.24□□□□□ -0.93
PDCD4-209ENST00000489049 SLC24A3Q9HC58 644 aa9.24□□□□□ -0.93
PDCD4-209ENST00000489049 MAP10Q9P2G4 905 aa9.24□□□□□ -0.93
PDCD4-209ENST00000489049 CFAP74Q9C0B2 1584 aa9.24□□□□□ -0.93
PDCD4-209ENST00000489049 FANCAO15360 1455 aa9.23□□□□□ -0.93
PDCD4-209ENST00000489049 NNTQ13423 1086 aa9.23□□□□□ -0.93
PDCD4-209ENST00000489049 CABLES1Q8TDN4 633 aa9.23□□□□□ -0.93
PDCD4-209ENST00000489049 RIMBP3CA6NJZ7 1639 aa9.23□□□□□ -0.93
PDCD4-209ENST00000489049 RIMBP3BA6NNM3 1639 aa9.23□□□□□ -0.93
PDCD4-209ENST00000489049 RIMBP3Q9UFD9 1639 aa9.23□□□□□ -0.93
PDCD4-209ENST00000489049 FAM135AQ9P2D6 1515 aa9.22□□□□□ -0.93
PDCD4-209ENST00000489049 IQGAP3Q86VI3 1631 aa9.22□□□□□ -0.93
PDCD4-209ENST00000489049 INSM1Q01101 510 aaPredicted RBP9.21□□□□□ -0.94
PDCD4-209ENST00000489049 PDE4DQ08499 809 aa9.21□□□□□ -0.94
PDCD4-209ENST00000489049 CSPP1Q1MSJ5 1256 aa9.21□□□□□ -0.94
PDCD4-209ENST00000489049 FAM174AQ8TBP5 190 aa9.21□□□□□ -0.94
PDCD4-209ENST00000489049 KANK1Q14678 1352 aa9.21□□□□□ -0.94
PDCD4-209ENST00000489049 ANP32CO43423 234 aa9.2□□□□□ -0.94
PDCD4-209ENST00000489049 MYSM1Q5VVJ2 828 aa9.2□□□□□ -0.94
PDCD4-209ENST00000489049 FOXJ1Q92949 421 aa9.2□□□□□ -0.94
PDCD4-209ENST00000489049 NXF1Q9UBU9 619 aaKnown RBP9.2□□□□□ -0.94
PDCD4-209ENST00000489049 LIMD1Q9UGP4 676 aa9.2□□□□□ -0.94
PDCD4-209ENST00000489049 CCDC144AA2RUR9 1427 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms