RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 USHBP1Q8N6Y0 703 aa23.95■■□□□ 1.42
ATG3-205ENST00000488910 ACSBG1Q96GR2 724 aa23.95■■□□□ 1.42
ATG3-205ENST00000488910 KAT6BQ8WYB5 2073 aa23.95■■□□□ 1.42
ATG3-205ENST00000488910 NUP188Q5SRE5 1749 aa23.94■■□□□ 1.42
ATG3-205ENST00000488910 TNNT2P45379 298 aaPredicted RBP23.94■■□□□ 1.42
ATG3-205ENST00000488910 MEGF6O75095 1541 aa23.94■■□□□ 1.42
ATG3-205ENST00000488910 NHSQ6T4R5 1651 aa23.92■■□□□ 1.42
ATG3-205ENST00000488910 MORC1Q86VD1 984 aa23.92■■□□□ 1.42
ATG3-205ENST00000488910 PROM2Q8N271 834 aa23.92■■□□□ 1.42
ATG3-205ENST00000488910 TXNRD1Q16881 649 aa23.89■■□□□ 1.41
ATG3-205ENST00000488910 AMER1Q5JTC6 1135 aaPredicted RBP23.88■■□□□ 1.41
ATG3-205ENST00000488910 EYA1Q99502 592 aa23.88■■□□□ 1.41
ATG3-205ENST00000488910 NCAPD2Q15021 1401 aa23.87■■□□□ 1.41
ATG3-205ENST00000488910 EIF4A2Q14240 407 aaKnown RBP23.86■■□□□ 1.41
ATG3-205ENST00000488910 SHANK3Q9BYB0 1731 aa23.86■■□□□ 1.41
ATG3-205ENST00000488910 PCDH11XQ9BZA7 1347 aa23.85■■□□□ 1.41
ATG3-205ENST00000488910 PCDH11YQ9BZA8 1340 aa23.85■■□□□ 1.41
ATG3-205ENST00000488910 LRP5O75197 1615 aa23.85■■□□□ 1.41
ATG3-205ENST00000488910 PER1O15534 1290 aaPredicted RBP23.85■■□□□ 1.41
ATG3-205ENST00000488910 PRIM1P49642 420 aaKnown RBP23.85■■□□□ 1.41
ATG3-205ENST00000488910 BTAF1O14981 1849 aa23.84■■□□□ 1.41
ATG3-205ENST00000488910 SYTL4Q96C24 671 aaPredicted RBP23.83■■□□□ 1.41
ATG3-205ENST00000488910 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.82■■□□□ 1.4
ATG3-205ENST00000488910 SPG7Q9UQ90 795 aa23.82■■□□□ 1.4
ATG3-205ENST00000488910 ANO8Q9HCE9 1232 aaPredicted RBP23.81■■□□□ 1.4
ATG3-205ENST00000488910 STK32BQ9NY57 414 aa23.8■■□□□ 1.4
ATG3-205ENST00000488910 CYP27B1O15528 508 aa23.79■■□□□ 1.4
ATG3-205ENST00000488910 SLC27A3Q5K4L6 730 aa23.79■■□□□ 1.4
ATG3-205ENST00000488910 PLEKHG2Q9H7P9 1386 aa23.78■■□□□ 1.4
ATG3-205ENST00000488910 SLC15A2Q16348 729 aa23.78■■□□□ 1.4
ATG3-205ENST00000488910 DOT1LQ8TEK3 1739 aa23.78■■□□□ 1.4
ATG3-205ENST00000488910 IGSF1Q8N6C5 1336 aa23.78■■□□□ 1.4
ATG3-205ENST00000488910 PKD1L3Q7Z443 1732 aa23.77■■□□□ 1.4
ATG3-205ENST00000488910 NKX1-1Q15270 411 aaPredicted RBP23.77■■□□□ 1.4
ATG3-205ENST00000488910 NPC1L1Q9UHC9 1359 aa23.77■■□□□ 1.4
ATG3-205ENST00000488910 LRRC4BQ9NT99 713 aa23.75■■□□□ 1.39
ATG3-205ENST00000488910 CC2D1BQ5T0F9 858 aaKnown RBP23.74■■□□□ 1.39
ATG3-205ENST00000488910 SPON1Q9HCB6 807 aa23.74■■□□□ 1.39
ATG3-205ENST00000488910 MTHFSP49914 203 aa23.73■■□□□ 1.39
ATG3-205ENST00000488910 IFNL2Q8IZJ0 200 aa23.73■■□□□ 1.39
ATG3-205ENST00000488910 IL13P35225 146 aa23.71■■□□□ 1.39
ATG3-205ENST00000488910 PHKG2P15735 406 aa23.7■■□□□ 1.38
ATG3-205ENST00000488910 HMGB2P26583 209 aaKnown RBP23.7■■□□□ 1.38
ATG3-205ENST00000488910 PLEKHO1Q53GL0 409 aaPredicted RBP23.7■■□□□ 1.38
ATG3-205ENST00000488910 MPRIPQ6WCQ1 1025 aa23.7■■□□□ 1.38
ATG3-205ENST00000488910 AMOTQ4VCS5 1084 aa23.69■■□□□ 1.38
ATG3-205ENST00000488910 PAPPAQ13219 1627 aa23.69■■□□□ 1.38
ATG3-205ENST00000488910 LY75O60449 1722 aa23.68■■□□□ 1.38
ATG3-205ENST00000488910 CASZ1Q86V15 1759 aa23.68■■□□□ 1.38
ATG3-205ENST00000488910 SULT6B1Q6IMI4 303 aa23.67■■□□□ 1.38
ATG3-205ENST00000488910 SMARCC1Q92922 1105 aaPredicted RBP23.67■■□□□ 1.38
ATG3-205ENST00000488910 AKT1S1Q96B36 256 aa23.67■■□□□ 1.38
ATG3-205ENST00000488910 PDGFDQ9GZP0 370 aaPredicted RBP23.67■■□□□ 1.38
ATG3-205ENST00000488910 CCNL1Q9UK58 526 aaPredicted RBP23.67■■□□□ 1.38
ATG3-205ENST00000488910 HSP90AB1P08238 724 aaKnown RBP23.66■■□□□ 1.38
ATG3-205ENST00000488910 PIGBQ92521 554 aa23.66■■□□□ 1.38
ATG3-205ENST00000488910 ITGB4P16144 1822 aa23.66■■□□□ 1.38
ATG3-205ENST00000488910 ZNF827Q17R98 1081 aa23.65■■□□□ 1.38
ATG3-205ENST00000488910 AEBP1Q8IUX7 1158 aa23.65■■□□□ 1.38
ATG3-205ENST00000488910 KDRP35968 1356 aa23.65■■□□□ 1.38
ATG3-205ENST00000488910 KCNQ4P56696 695 aa23.64■■□□□ 1.37
ATG3-205ENST00000488910 TOGARAM1Q9Y4F4 1720 aa23.64■■□□□ 1.37
ATG3-205ENST00000488910 DIAPH1O60610 1272 aaKnown RBP23.63■■□□□ 1.37
ATG3-205ENST00000488910 ZBTB7AO95365 584 aa23.63■■□□□ 1.37
ATG3-205ENST00000488910 TMOD3Q9NYL9 352 aa23.63■■□□□ 1.37
ATG3-205ENST00000488910 PPP1R1BQ9UD71 204 aaPredicted RBP23.63■■□□□ 1.37
ATG3-205ENST00000488910 PALLDQ8WX93 1383 aa23.63■■□□□ 1.37
ATG3-205ENST00000488910 ZNF530Q6P9A1 599 aaPredicted RBP23.62■■□□□ 1.37
ATG3-205ENST00000488910 DCAF5Q96JK2 942 aa23.62■■□□□ 1.37
ATG3-205ENST00000488910 MTFR1LQ9H019 292 aa23.62■■□□□ 1.37
ATG3-205ENST00000488910 ERVV-2B6SEH9 535 aa23.61■■□□□ 1.37
ATG3-205ENST00000488910 CNGB1Q14028 1251 aaPredicted RBP23.61■■□□□ 1.37
ATG3-205ENST00000488910 TFCP2L1Q9NZI6 479 aa23.61■■□□□ 1.37
ATG3-205ENST00000488910 ATF5Q9Y2D1 282 aaPredicted RBP23.6■■□□□ 1.37
ATG3-205ENST00000488910 C1orf141Q5JVX7 400 aa23.59■■□□□ 1.37
ATG3-205ENST00000488910 SLC16A10Q8TF71 515 aa23.59■■□□□ 1.37
ATG3-205ENST00000488910 PTGER2P43116 358 aa23.58■■□□□ 1.37
ATG3-205ENST00000488910 QSER1Q2KHR3 1735 aa23.58■■□□□ 1.37
ATG3-205ENST00000488910 ASAP1Q9ULH1 1129 aa23.56■■□□□ 1.36
ATG3-205ENST00000488910 PNPLA7Q6ZV29 1317 aa23.56■■□□□ 1.36
ATG3-205ENST00000488910 LOC102724428A0A0B4J2F2 783 aa23.54■■□□□ 1.36
ATG3-205ENST00000488910 HMOX1P09601 288 aa23.54■■□□□ 1.36
ATG3-205ENST00000488910 SIK1P57059 783 aa23.54■■□□□ 1.36
ATG3-205ENST00000488910 ATG3Q9NT62 314 aa23.54■■□□□ 1.36
ATG3-205ENST00000488910 CABP4P57796 275 aa23.53■■□□□ 1.36
ATG3-205ENST00000488910 AKAP4Q5JQC9 854 aa23.53■■□□□ 1.36
ATG3-205ENST00000488910 CFAP53Q96M91 514 aa23.53■■□□□ 1.36
ATG3-205ENST00000488910 SGIP1Q9BQI5 828 aa23.53■■□□□ 1.36
ATG3-205ENST00000488910 C5P01031 1676 aa23.52■■□□□ 1.36
ATG3-205ENST00000488910 FLAD1Q8NFF5 587 aa23.52■■□□□ 1.36
ATG3-205ENST00000488910 TAF1LQ8IZX4 1826 aa23.52■■□□□ 1.36
ATG3-205ENST00000488910 KDM6AO15550 1401 aaPredicted RBP23.51■■□□□ 1.35
ATG3-205ENST00000488910 COL3A1P02461 1466 aaPredicted RBP23.51■■□□□ 1.35
ATG3-205ENST00000488910 U2SURPO15042 1029 aaKnown RBP23.5■■□□□ 1.35
ATG3-205ENST00000488910 PPP2R1AP30153 589 aa23.5■■□□□ 1.35
ATG3-205ENST00000488910 TUBGCP6Q96RT7 1819 aa23.49■■□□□ 1.35
ATG3-205ENST00000488910 COL23A1Q86Y22 540 aaPredicted RBP23.49■■□□□ 1.35
ATG3-205ENST00000488910 ATP6V1AP38606 617 aa23.48■■□□□ 1.35
ATG3-205ENST00000488910 NFATC2IPQ8NCF5 419 aa23.48■■□□□ 1.35
ATG3-205ENST00000488910 AK7Q96M32 723 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms