RNA–Protein interactions for RNA: ENST00000488623.5

CTNS-206, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-206ENST00000488623 CCDC27Q2M243 656 aa19.91■□□□□ 0.78
CTNS-206ENST00000488623 MTHFSDQ2M296 383 aaKnown RBP19.91■□□□□ 0.78
CTNS-206ENST00000488623 TRIM35Q9UPQ4 493 aa19.91■□□□□ 0.78
CTNS-206ENST00000488623 CENPBP07199 599 aaPredicted RBP19.9■□□□□ 0.78
CTNS-206ENST00000488623 WWC1Q8IX03 1113 aa19.9■□□□□ 0.78
CTNS-206ENST00000488623 UPF1Q92900 1129 aaKnown RBP eCLIP19.9■□□□□ 0.78
CTNS-206ENST00000488623 CARD10Q9BWT7 1032 aa19.9■□□□□ 0.78
CTNS-206ENST00000488623 NWD2Q9ULI1 1742 aa19.9■□□□□ 0.78
CTNS-206ENST00000488623 SLIT2O94813 1529 aa19.88■□□□□ 0.77
CTNS-206ENST00000488623 DLG5Q8TDM6 1919 aa19.88■□□□□ 0.77
CTNS-206ENST00000488623 PDE3BQ13370 1112 aa19.87■□□□□ 0.77
CTNS-206ENST00000488623 CDCA7LQ96GN5 454 aa19.87■□□□□ 0.77
CTNS-206ENST00000488623 CRB1P82279 1406 aa19.86■□□□□ 0.77
CTNS-206ENST00000488623 PLEKHO1Q53GL0 409 aaPredicted RBP19.86■□□□□ 0.77
CTNS-206ENST00000488623 GAS2L2Q8NHY3 880 aa19.86■□□□□ 0.77
CTNS-206ENST00000488623 RAPGEF4Q8WZA2 1011 aa19.86■□□□□ 0.77
CTNS-206ENST00000488623 NRAPQ86VF7 1730 aa19.85■□□□□ 0.77
CTNS-206ENST00000488623 TATP17735 454 aaPredicted RBP19.85■□□□□ 0.77
CTNS-206ENST00000488623 WDR63Q8IWG1 891 aa19.85■□□□□ 0.77
CTNS-206ENST00000488623 GOLGA2Q08379 1002 aa19.84■□□□□ 0.77
CTNS-206ENST00000488623 UNC5CLQ8IV45 518 aa19.84■□□□□ 0.77
CTNS-206ENST00000488623 GLI3P10071 1580 aa19.83■□□□□ 0.77
CTNS-206ENST00000488623 MEGF6O75095 1541 aa19.83■□□□□ 0.77
CTNS-206ENST00000488623 AMOTQ4VCS5 1084 aa19.83■□□□□ 0.77
CTNS-206ENST00000488623 GJD4Q96KN9 370 aaPredicted RBP19.83■□□□□ 0.77
CTNS-206ENST00000488623 SPINK5Q9NQ38 1064 aaPredicted RBP19.83■□□□□ 0.77
CTNS-206ENST00000488623 BRWD3Q6RI45 1802 aa19.83■□□□□ 0.76
CTNS-206ENST00000488623 SLFN5Q08AF3 891 aa19.82■□□□□ 0.76
CTNS-206ENST00000488623 USP35Q9P2H5 1018 aa19.82■□□□□ 0.76
CTNS-206ENST00000488623 LMOD3Q0VAK6 560 aa19.81■□□□□ 0.76
CTNS-206ENST00000488623 DCTN1Q14203 1278 aa19.81■□□□□ 0.76
CTNS-206ENST00000488623 THUMPD2Q9BTF0 503 aaKnown RBP19.81■□□□□ 0.76
CTNS-206ENST00000488623 IL2RBP14784 551 aa19.8■□□□□ 0.76
CTNS-206ENST00000488623 ZNF530Q6P9A1 599 aaPredicted RBP19.8■□□□□ 0.76
CTNS-206ENST00000488623 TRMT2AQ8IZ69 625 aaKnown RBP19.8■□□□□ 0.76
CTNS-206ENST00000488623 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.8■□□□□ 0.76
CTNS-206ENST00000488623 SPATA31A1Q5TZJ5 1347 aa19.79■□□□□ 0.76
CTNS-206ENST00000488623 SPATA31A5Q5VU36 1347 aa19.79■□□□□ 0.76
CTNS-206ENST00000488623 SPATA31A7Q8IWB4 1347 aa19.79■□□□□ 0.76
CTNS-206ENST00000488623 GNAT3A8MTJ3 354 aa19.79■□□□□ 0.76
CTNS-206ENST00000488623 HTATSF1O43719 755 aaKnown RBP19.79■□□□□ 0.76
CTNS-206ENST00000488623 MCM10Q7L590 875 aa19.79■□□□□ 0.76
CTNS-206ENST00000488623 SPG7Q9UQ90 795 aa19.79■□□□□ 0.76
CTNS-206ENST00000488623 OVOS2A0A0G2JMS6 1433 aa19.78■□□□□ 0.76
CTNS-206ENST00000488623 AKAP4Q5JQC9 854 aa19.78■□□□□ 0.76
CTNS-206ENST00000488623 PLEKHG2Q9H7P9 1386 aa19.78■□□□□ 0.76
CTNS-206ENST00000488623 E9PSI1 815 aa19.77■□□□□ 0.76
CTNS-206ENST00000488623 VPS72Q15906 364 aa19.77■□□□□ 0.76
CTNS-206ENST00000488623 DUSP27Q5VZP5 1158 aa19.77■□□□□ 0.76
CTNS-206ENST00000488623 IL17REQ8NFR9 667 aa19.77■□□□□ 0.76
CTNS-206ENST00000488623 MAP3K5Q99683 1374 aa19.77■□□□□ 0.76
CTNS-206ENST00000488623 IL16Q14005 1332 aa19.76■□□□□ 0.75
CTNS-206ENST00000488623 ZCRB1Q8TBF4 217 aaKnown RBP19.76■□□□□ 0.75
CTNS-206ENST00000488623 RTF1Q92541 710 aaKnown RBP19.76■□□□□ 0.75
CTNS-206ENST00000488623 THRAP3Q9Y2W1 955 aaKnown RBP19.76■□□□□ 0.75
CTNS-206ENST00000488623 EP400Q96L91 3159 aa19.76■□□□□ 0.75
CTNS-206ENST00000488623 PARP4Q9UKK3 1724 aaKnown RBP19.76■□□□□ 0.75
CTNS-206ENST00000488623 C1orf141Q5JVX7 400 aa19.75■□□□□ 0.75
CTNS-206ENST00000488623 LGR6Q9HBX8 967 aa19.75■□□□□ 0.75
CTNS-206ENST00000488623 CCDC9Q9Y3X0 531 aaKnown RBP19.75■□□□□ 0.75
CTNS-206ENST00000488623 PKD1L3Q7Z443 1732 aa19.75■□□□□ 0.75
CTNS-206ENST00000488623 DISP2A7MBM2 1401 aa19.75■□□□□ 0.75
CTNS-206ENST00000488623 CYP27B1O15528 508 aa19.74■□□□□ 0.75
CTNS-206ENST00000488623 PHKG2P15735 406 aa19.74■□□□□ 0.75
CTNS-206ENST00000488623 ZNF853P0CG23 659 aa19.73■□□□□ 0.75
CTNS-206ENST00000488623 CALD1Q05682 793 aaKnown RBP19.73■□□□□ 0.75
CTNS-206ENST00000488623 IFNL2Q8IZJ0 200 aa19.73■□□□□ 0.75
CTNS-206ENST00000488623 RNMTO43148 476 aaKnown RBP19.72■□□□□ 0.75
CTNS-206ENST00000488623 MPRIPQ6WCQ1 1025 aa19.72■□□□□ 0.75
CTNS-206ENST00000488623 BARGINQ6ZT62 677 aa19.72■□□□□ 0.75
CTNS-206ENST00000488623 CDCA7Q9BWT1 371 aaPredicted RBP19.71■□□□□ 0.75
CTNS-206ENST00000488623 MYH16Q9H6N6 1097 aa19.71■□□□□ 0.75
CTNS-206ENST00000488623 IFT57Q9NWB7 429 aa19.71■□□□□ 0.75
CTNS-206ENST00000488623 LAS1LQ9Y4W2 734 aaKnown RBP19.71■□□□□ 0.75
CTNS-206ENST00000488623 WNK3Q9BYP7 1800 aa19.71■□□□□ 0.75
CTNS-206ENST00000488623 GNAI1P63096 354 aa19.7■□□□□ 0.74
CTNS-206ENST00000488623 TSR2Q969E8 191 aaKnown RBP19.7■□□□□ 0.74
CTNS-206ENST00000488623 CFAP44Q96MT7 982 aa19.7■□□□□ 0.74
CTNS-206ENST00000488623 CEMIPQ8WUJ3 1361 aa19.7■□□□□ 0.74
CTNS-206ENST00000488623 SHANK3Q9BYB0 1731 aa19.69■□□□□ 0.74
CTNS-206ENST00000488623 EXOC5O00471 708 aa19.69■□□□□ 0.74
CTNS-206ENST00000488623 MSH5O43196 834 aa19.69■□□□□ 0.74
CTNS-206ENST00000488623 DDX54Q8TDD1 881 aaKnown RBP19.69■□□□□ 0.74
CTNS-206ENST00000488623 PCDH11XQ9BZA7 1347 aa19.69■□□□□ 0.74
CTNS-206ENST00000488623 PCDH11YQ9BZA8 1340 aa19.69■□□□□ 0.74
CTNS-206ENST00000488623 VIRMAQ69YN4 1812 aaKnown RBP19.69■□□□□ 0.74
CTNS-206ENST00000488623 CHL1O00533 1208 aa19.68■□□□□ 0.74
CTNS-206ENST00000488623 SEPT12Q8IYM1 358 aa19.68■□□□□ 0.74
CTNS-206ENST00000488623 MBIPQ9NS73 344 aa19.68■□□□□ 0.74
CTNS-206ENST00000488623 FANCIQ9NVI1 1328 aa19.68■□□□□ 0.74
CTNS-206ENST00000488623 NKX1-1Q15270 411 aaPredicted RBP19.67■□□□□ 0.74
CTNS-206ENST00000488623 TAF7Q15545 349 aaPredicted RBP19.67■□□□□ 0.74
CTNS-206ENST00000488623 LRRC37A3O60309 1634 aa19.66■□□□□ 0.74
CTNS-206ENST00000488623 ADAMTS7Q9UKP4 1686 aa19.66■□□□□ 0.74
CTNS-206ENST00000488623 HSP90AB1P08238 724 aaKnown RBP19.66■□□□□ 0.74
CTNS-206ENST00000488623 FAM98CQ17RN3 349 aaKnown RBP19.66■□□□□ 0.74
CTNS-206ENST00000488623 DCAF5Q96JK2 942 aa19.66■□□□□ 0.74
CTNS-206ENST00000488623 MIS18AQ9NYP9 233 aa19.66■□□□□ 0.74
CTNS-206ENST00000488623 KDM6AO15550 1401 aaPredicted RBP19.66■□□□□ 0.74
CTNS-206ENST00000488623 SCN11AQ9UI33 1791 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms