RNA–Protein interactions for RNA: ENST00000488254.6

NOLC1-207, Transcript of nucleolar and coiled-body phosphoprotein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NOLC1, Length 2,441 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOLC1-207ENST00000488254 NFE2L2Q16236 605 aa13.34□□□□□ -0.27
NOLC1-207ENST00000488254 WWC1Q8IX03 1113 aa13.34□□□□□ -0.27
NOLC1-207ENST00000488254 CARD10Q9BWT7 1032 aa13.34□□□□□ -0.27
NOLC1-207ENST00000488254 UNC5CLQ8IV45 518 aa13.34□□□□□ -0.27
NOLC1-207ENST00000488254 CRB1P82279 1406 aa13.34□□□□□ -0.27
NOLC1-207ENST00000488254 NRAPQ86VF7 1730 aa13.33□□□□□ -0.28
NOLC1-207ENST00000488254 FNBP4Q8N3X1 1017 aaPredicted RBP13.33□□□□□ -0.28
NOLC1-207ENST00000488254 PNNQ9H307 717 aaKnown RBP13.33□□□□□ -0.28
NOLC1-207ENST00000488254 RBM19Q9Y4C8 960 aaKnown RBP13.33□□□□□ -0.28
NOLC1-207ENST00000488254 ABCC6O95255 1503 aa13.33□□□□□ -0.28
NOLC1-207ENST00000488254 TATP17735 454 aaPredicted RBP13.32□□□□□ -0.28
NOLC1-207ENST00000488254 NCAPD2Q15021 1401 aa13.32□□□□□ -0.28
NOLC1-207ENST00000488254 ZNF530Q6P9A1 599 aaPredicted RBP13.32□□□□□ -0.28
NOLC1-207ENST00000488254 KAT6BQ8WYB5 2073 aa13.32□□□□□ -0.28
NOLC1-207ENST00000488254 FAM98CQ17RN3 349 aaKnown RBP13.31□□□□□ -0.28
NOLC1-207ENST00000488254 MPRIPQ6WCQ1 1025 aa13.31□□□□□ -0.28
NOLC1-207ENST00000488254 DDX54Q8TDD1 881 aaKnown RBP13.31□□□□□ -0.28
NOLC1-207ENST00000488254 LAS1LQ9Y4W2 734 aaKnown RBP13.31□□□□□ -0.28
NOLC1-207ENST00000488254 SPATA31A1Q5TZJ5 1347 aa13.31□□□□□ -0.28
NOLC1-207ENST00000488254 LGR6Q9HBX8 967 aa13.31□□□□□ -0.28
NOLC1-207ENST00000488254 ZNF521Q96K83 1311 aa13.31□□□□□ -0.28
NOLC1-207ENST00000488254 IL2RBP14784 551 aa13.3□□□□□ -0.28
NOLC1-207ENST00000488254 MIS18AQ9NYP9 233 aa13.3□□□□□ -0.28
NOLC1-207ENST00000488254 CYP27B1O15528 508 aa13.3□□□□□ -0.28
NOLC1-207ENST00000488254 PLEKHO1Q53GL0 409 aaPredicted RBP13.3□□□□□ -0.28
NOLC1-207ENST00000488254 SPATA31A5Q5VU36 1347 aa13.3□□□□□ -0.28
NOLC1-207ENST00000488254 SPATA31A7Q8IWB4 1347 aa13.3□□□□□ -0.28
NOLC1-207ENST00000488254 A0A0G2JS52 829 aa13.29□□□□□ -0.28
NOLC1-207ENST00000488254 PHF23Q9BUL5 403 aaPredicted RBP13.29□□□□□ -0.28
NOLC1-207ENST00000488254 NWD2Q9ULI1 1742 aa13.29□□□□□ -0.28
NOLC1-207ENST00000488254 IL17REQ8NFR9 667 aa13.29□□□□□ -0.28
NOLC1-207ENST00000488254 TSR2Q969E8 191 aaKnown RBP13.29□□□□□ -0.28
NOLC1-207ENST00000488254 GNAT3A8MTJ3 354 aa13.28□□□□□ -0.28
NOLC1-207ENST00000488254 ILDR1Q86SU0 546 aaPredicted RBP13.28□□□□□ -0.28
NOLC1-207ENST00000488254 GAS2L2Q8NHY3 880 aa13.28□□□□□ -0.28
NOLC1-207ENST00000488254 GOLGA2Q08379 1002 aa13.28□□□□□ -0.28
NOLC1-207ENST00000488254 ZCRB1Q8TBF4 217 aaKnown RBP13.28□□□□□ -0.28
NOLC1-207ENST00000488254 QTRT2Q9H974 415 aaKnown RBP13.28□□□□□ -0.28
NOLC1-207ENST00000488254 VPS72Q15906 364 aa13.27□□□□□ -0.29
NOLC1-207ENST00000488254 FAM182BQ5T319 152 aa13.27□□□□□ -0.29
NOLC1-207ENST00000488254 OVOS2A0A0G2JMS6 1433 aa13.27□□□□□ -0.29
NOLC1-207ENST00000488254 RTF1Q92541 710 aaKnown RBP13.27□□□□□ -0.29
NOLC1-207ENST00000488254 C1orf141Q5JVX7 400 aa13.26□□□□□ -0.29
NOLC1-207ENST00000488254 MAP3K5Q99683 1374 aa13.26□□□□□ -0.29
NOLC1-207ENST00000488254 PHKG2P15735 406 aa13.25□□□□□ -0.29
NOLC1-207ENST00000488254 CCDC27Q2M243 656 aa13.25□□□□□ -0.29
NOLC1-207ENST00000488254 AMOTQ4VCS5 1084 aa13.25□□□□□ -0.29
NOLC1-207ENST00000488254 SPG7Q9UQ90 795 aa13.25□□□□□ -0.29
NOLC1-207ENST00000488254 SLFN5Q08AF3 891 aa13.25□□□□□ -0.29
NOLC1-207ENST00000488254 GJD4Q96KN9 370 aaPredicted RBP13.25□□□□□ -0.29
NOLC1-207ENST00000488254 AKAP4Q5JQC9 854 aa13.24□□□□□ -0.29
NOLC1-207ENST00000488254 DISP2A7MBM2 1401 aa13.24□□□□□ -0.29
NOLC1-207ENST00000488254 DUSP27Q5VZP5 1158 aa13.24□□□□□ -0.29
NOLC1-207ENST00000488254 SHANK3Q9BYB0 1731 aa13.24□□□□□ -0.29
NOLC1-207ENST00000488254 VIRMAQ69YN4 1812 aaKnown RBP13.23□□□□□ -0.29
NOLC1-207ENST00000488254 EXOC5O00471 708 aa13.23□□□□□ -0.29
NOLC1-207ENST00000488254 KRT24Q2M2I5 525 aa13.23□□□□□ -0.29
NOLC1-207ENST00000488254 IFNL2Q8IZJ0 200 aa13.23□□□□□ -0.29
NOLC1-207ENST00000488254 RGS17Q9UGC6 210 aaPredicted RBP13.23□□□□□ -0.29
NOLC1-207ENST00000488254 PARP4Q9UKK3 1724 aaKnown RBP13.23□□□□□ -0.29
NOLC1-207ENST00000488254 ELL2O00472 640 aaPredicted RBP13.23□□□□□ -0.29
NOLC1-207ENST00000488254 GLI3P10071 1580 aa13.23□□□□□ -0.29
NOLC1-207ENST00000488254 TRPC5Q9UL62 973 aaPredicted RBP13.23□□□□□ -0.29
NOLC1-207ENST00000488254 PKD1L3Q7Z443 1732 aa13.22□□□□□ -0.29
NOLC1-207ENST00000488254 KDM6AO15550 1401 aaPredicted RBP13.22□□□□□ -0.29
NOLC1-207ENST00000488254 RNMTO43148 476 aaKnown RBP13.22□□□□□ -0.29
NOLC1-207ENST00000488254 DDB1Q16531 1140 aa13.22□□□□□ -0.29
NOLC1-207ENST00000488254 WDR63Q8IWG1 891 aa13.22□□□□□ -0.29
NOLC1-207ENST00000488254 KCNQ3O43525 872 aa13.21□□□□□ -0.29
NOLC1-207ENST00000488254 NFATC2IPQ8NCF5 419 aa13.21□□□□□ -0.29
NOLC1-207ENST00000488254 MBIPQ9NS73 344 aa13.21□□□□□ -0.29
NOLC1-207ENST00000488254 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.21□□□□□ -0.295e-7■□□□□ 9.7
NOLC1-207ENST00000488254 PCDH11XQ9BZA7 1347 aa13.21□□□□□ -0.29
NOLC1-207ENST00000488254 PCDH11YQ9BZA8 1340 aa13.21□□□□□ -0.29
NOLC1-207ENST00000488254 FANCIQ9NVI1 1328 aa13.21□□□□□ -0.29
NOLC1-207ENST00000488254 E9PSI1 815 aa13.21□□□□□ -0.3
NOLC1-207ENST00000488254 LMOD3Q0VAK6 560 aa13.21□□□□□ -0.3
NOLC1-207ENST00000488254 MARCH10Q8NA82 808 aaPredicted RBP13.21□□□□□ -0.3
NOLC1-207ENST00000488254 THRAP3Q9Y2W1 955 aaKnown RBP13.21□□□□□ -0.3
NOLC1-207ENST00000488254 WNK3Q9BYP7 1800 aa13.21□□□□□ -0.3
NOLC1-207ENST00000488254 ATRNO75882 1429 aa13.2□□□□□ -0.3
NOLC1-207ENST00000488254 IRX6P78412 446 aaPredicted RBP13.2□□□□□ -0.3
NOLC1-207ENST00000488254 SLC39A6Q13433 755 aa13.2□□□□□ -0.3
NOLC1-207ENST00000488254 BARGINQ6ZT62 677 aa13.2□□□□□ -0.3
NOLC1-207ENST00000488254 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.2□□□□□ -0.3
NOLC1-207ENST00000488254 EXOSC9Q06265 439 aaKnown RBP13.2□□□□□ -0.3
NOLC1-207ENST00000488254 POTEAQ6S8J7 498 aa13.2□□□□□ -0.3
NOLC1-207ENST00000488254 TRMT2AQ8IZ69 625 aaKnown RBP13.2□□□□□ -0.3
NOLC1-207ENST00000488254 NGEFQ8N5V2 710 aa13.2□□□□□ -0.3
NOLC1-207ENST00000488254 ACSBG1Q96GR2 724 aa13.2□□□□□ -0.3
NOLC1-207ENST00000488254 MSH5O43196 834 aa13.19□□□□□ -0.3
NOLC1-207ENST00000488254 TEFQ10587 303 aa13.19□□□□□ -0.3
NOLC1-207ENST00000488254 SYTL4Q96C24 671 aaPredicted RBP13.19□□□□□ -0.3
NOLC1-207ENST00000488254 CEMIPQ8WUJ3 1361 aa13.19□□□□□ -0.3
NOLC1-207ENST00000488254 TCERG1O14776 1098 aaKnown RBP13.19□□□□□ -0.3
NOLC1-207ENST00000488254 PDE3BQ13370 1112 aa13.19□□□□□ -0.3
NOLC1-207ENST00000488254 SEPT12Q8IYM1 358 aa13.19□□□□□ -0.3
NOLC1-207ENST00000488254 TSPYL6Q8N831 410 aa13.19□□□□□ -0.3
NOLC1-207ENST00000488254 CFAP44Q96MT7 982 aa13.19□□□□□ -0.3
NOLC1-207ENST00000488254 TSPYL4Q9UJ04 414 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms