RNA–Protein interactions for RNA: ENST00000488254.6

NOLC1-207, Transcript of nucleolar and coiled-body phosphoprotein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NOLC1, Length 2,441 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOLC1-207ENST00000488254 NISCHQ9Y2I1 1504 aa23.6■■□□□ 1.37
NOLC1-207ENST00000488254 CCDC180Q9P1Z9 1646 aa20.62■□□□□ 0.89
NOLC1-207ENST00000488254 ABCC9O60706 1549 aa20.02■□□□□ 0.8
NOLC1-207ENST00000488254 DCAF8L2P0C7V8 631 aa19.84■□□□□ 0.77
NOLC1-207ENST00000488254 ZCCHC6Q5VYS8 1495 aaKnown RBP19.73■□□□□ 0.75
NOLC1-207ENST00000488254 DCAF1Q9Y4B6 1507 aa19.38■□□□□ 0.69
NOLC1-207ENST00000488254 NACADO15069 1562 aa19.31■□□□□ 0.68
NOLC1-207ENST00000488254 SHROOM4Q9ULL8 1493 aa19.26■□□□□ 0.67
NOLC1-207ENST00000488254 RB1CC1Q8TDY2 1594 aa19.25■□□□□ 0.67
NOLC1-207ENST00000488254 MYO15BQ96JP2 1530 aa19.24■□□□□ 0.67
NOLC1-207ENST00000488254 SCRIBQ14160 1630 aa19.11■□□□□ 0.65
NOLC1-207ENST00000488254 UNC13AQ9UPW8 1703 aa18.95■□□□□ 0.62
NOLC1-207ENST00000488254 PABPN1Q86U42 306 aaKnown RBP eCLIP18.9■□□□□ 0.62
NOLC1-207ENST00000488254 BICRAQ9NZM4 1560 aa18.75■□□□□ 0.59
NOLC1-207ENST00000488254 CECR2Q9BXF3 1484 aa18.47■□□□□ 0.55
NOLC1-207ENST00000488254 SUPT5HO00267 1087 aaKnown RBP18.35■□□□□ 0.53
NOLC1-207ENST00000488254 MROH2BQ7Z745 1585 aa18.29■□□□□ 0.52
NOLC1-207ENST00000488254 RSF1Q96T23 1441 aaPredicted RBP18.22■□□□□ 0.51
NOLC1-207ENST00000488254 SMARCA4P51532 1647 aa18.21■□□□□ 0.51
NOLC1-207ENST00000488254 BAZ1AQ9NRL2 1556 aaPredicted RBP18.21■□□□□ 0.51
NOLC1-207ENST00000488254 EIF4G1Q04637 1599 aaKnown RBP18.2■□□□□ 0.5
NOLC1-207ENST00000488254 WIZO95785 1651 aa18.14■□□□□ 0.49
NOLC1-207ENST00000488254 DNAJC5BQ9UF47 199 aa18.06■□□□□ 0.48
NOLC1-207ENST00000488254 CC2D2AQ9P2K1 1620 aa18.04■□□□□ 0.48
NOLC1-207ENST00000488254 ATAD2BQ9ULI0 1458 aa18.01■□□□□ 0.47
NOLC1-207ENST00000488254 SMARCA2P51531 1590 aa17.92■□□□□ 0.46
NOLC1-207ENST00000488254 PEG3Q9GZU2 1588 aa17.92■□□□□ 0.46
NOLC1-207ENST00000488254 BAZ1BQ9UIG0 1483 aaKnown RBP17.89■□□□□ 0.45
NOLC1-207ENST00000488254 NCAPD3P42695 1498 aa17.86■□□□□ 0.45
NOLC1-207ENST00000488254 TOP2AP11388 1531 aaKnown RBP17.83■□□□□ 0.44
NOLC1-207ENST00000488254 HMGXB3Q12766 1538 aa17.77■□□□□ 0.43
NOLC1-207ENST00000488254 CCDC88BA6NC98 1476 aa17.72■□□□□ 0.43
NOLC1-207ENST00000488254 NESP48681 1621 aa17.5■□□□□ 0.39
NOLC1-207ENST00000488254 CADPSQ9ULU8 1353 aa17.42■□□□□ 0.38
NOLC1-207ENST00000488254 CFTRP13569 1480 aa17.39■□□□□ 0.37
NOLC1-207ENST00000488254 ABCC8Q09428 1581 aa17.32■□□□□ 0.36
NOLC1-207ENST00000488254 CHIC1Q5VXU3 224 aa17.3■□□□□ 0.36
NOLC1-207ENST00000488254 LAMC3Q9Y6N6 1575 aa17.29■□□□□ 0.36
NOLC1-207ENST00000488254 FANCD2Q9BXW9 1451 aa17.25■□□□□ 0.35
NOLC1-207ENST00000488254 PRDM2Q13029 1718 aa17.23■□□□□ 0.35
NOLC1-207ENST00000488254 KIF21AQ7Z4S6 1674 aa17.22■□□□□ 0.35
NOLC1-207ENST00000488254 PDS5BQ9NTI5 1447 aa17.19■□□□□ 0.34
NOLC1-207ENST00000488254 TRIM41Q8WV44 630 aa17.18■□□□□ 0.34
NOLC1-207ENST00000488254 ERCC6Q03468 1493 aa17.15■□□□□ 0.34
NOLC1-207ENST00000488254 CEP164Q9UPV0 1460 aa17.15■□□□□ 0.34
NOLC1-207ENST00000488254 WRNQ14191 1432 aaPredicted RBP eCLIP17.15■□□□□ 0.34
NOLC1-207ENST00000488254 SYNJ1O43426 1573 aa17.13■□□□□ 0.33
NOLC1-207ENST00000488254 CUX1P39880 1505 aa17.1■□□□□ 0.33
NOLC1-207ENST00000488254 URB2Q14146 1524 aaKnown RBP17.07■□□□□ 0.32
NOLC1-207ENST00000488254 TOPBP1Q92547 1522 aa17.02■□□□□ 0.31
NOLC1-207ENST00000488254 TOP2BQ02880 1626 aa17.01■□□□□ 0.31
NOLC1-207ENST00000488254 FAM9AQ8IZU1 332 aaPredicted RBP17■□□□□ 0.31
NOLC1-207ENST00000488254 MRC2Q9UBG0 1479 aa17■□□□□ 0.31
NOLC1-207ENST00000488254 DNMBPQ6XZF7 1577 aa16.98■□□□□ 0.31
NOLC1-207ENST00000488254 BIVM-ERCC5R4GMW8 1640 aa16.98■□□□□ 0.31
NOLC1-207ENST00000488254 FGD5Q6ZNL6 1462 aa16.97■□□□□ 0.31
NOLC1-207ENST00000488254 THOC2Q8NI27 1593 aaKnown RBP16.96■□□□□ 0.31
NOLC1-207ENST00000488254 RAD54L2Q9Y4B4 1467 aa16.94■□□□□ 0.3
NOLC1-207ENST00000488254 POLA1P09884 1462 aaPredicted RBP16.93■□□□□ 0.3
NOLC1-207ENST00000488254 SOGA1O94964 1423 aa16.92■□□□□ 0.3
NOLC1-207ENST00000488254 RUSC2Q8N2Y8 1516 aa16.91■□□□□ 0.3
NOLC1-207ENST00000488254 WDR62O43379 1518 aa16.91■□□□□ 0.3
NOLC1-207ENST00000488254 EHMT2Q96KQ7 1210 aa16.89■□□□□ 0.29
NOLC1-207ENST00000488254 CUX2O14529 1486 aa16.86■□□□□ 0.29
NOLC1-207ENST00000488254 TDRD9Q8NDG6 1382 aaKnown RBP16.82■□□□□ 0.28
NOLC1-207ENST00000488254 ZNF608Q9ULD9 1512 aaPredicted RBP16.78■□□□□ 0.28
NOLC1-207ENST00000488254 TARBP1Q13395 1621 aaKnown RBP16.78■□□□□ 0.28
NOLC1-207ENST00000488254 AQRO60306 1485 aaKnown RBP eCLIP16.75■□□□□ 0.271e-6■■■■□ 26
NOLC1-207ENST00000488254 LOC105371045A0A1W2PR82 267 aa16.75■□□□□ 0.27
NOLC1-207ENST00000488254 ABCA10Q8WWZ4 1543 aa16.74■□□□□ 0.27
NOLC1-207ENST00000488254 IFT140Q96RY7 1462 aa16.72■□□□□ 0.27
NOLC1-207ENST00000488254 WDR97A6NE52 1622 aa16.72■□□□□ 0.27
NOLC1-207ENST00000488254 KIF27Q86VH2 1401 aa16.71■□□□□ 0.27
NOLC1-207ENST00000488254 CSRNP3Q8WYN3 585 aa16.7■□□□□ 0.26
NOLC1-207ENST00000488254 GAPVD1Q14C86 1478 aa16.67■□□□□ 0.26
NOLC1-207ENST00000488254 IGF1RP08069 1367 aa16.65■□□□□ 0.26
NOLC1-207ENST00000488254 EIF4G3O43432 1585 aaKnown RBP16.64■□□□□ 0.25
NOLC1-207ENST00000488254 ABCA5Q8WWZ7 1642 aa16.64■□□□□ 0.25
NOLC1-207ENST00000488254 EEA1Q15075 1411 aa16.6■□□□□ 0.25
NOLC1-207ENST00000488254 PBRM1Q86U86 1689 aa16.58■□□□□ 0.24
NOLC1-207ENST00000488254 RAPGEF2Q9Y4G8 1499 aa16.56■□□□□ 0.24
NOLC1-207ENST00000488254 CARMIL1Q5VZK9 1371 aa16.56■□□□□ 0.24
NOLC1-207ENST00000488254 GRIN2BQ13224 1484 aa16.55■□□□□ 0.24
NOLC1-207ENST00000488254 FBLN2P98095 1184 aa16.55■□□□□ 0.24
NOLC1-207ENST00000488254 SNAPC4Q5SXM2 1469 aa16.54■□□□□ 0.24
NOLC1-207ENST00000488254 UBTFP17480 764 aaKnown RBP16.53■□□□□ 0.24
NOLC1-207ENST00000488254 PRXQ9BXM0 1461 aa16.52■□□□□ 0.24
NOLC1-207ENST00000488254 ERICH3Q5RHP9 1530 aa16.52■□□□□ 0.24
NOLC1-207ENST00000488254 RANGAP1P46060 587 aaPredicted RBP16.51■□□□□ 0.23
NOLC1-207ENST00000488254 KIF21BO75037 1637 aa16.46■□□□□ 0.23
NOLC1-207ENST00000488254 CHMP7Q8WUX9 453 aaPredicted RBP16.46■□□□□ 0.23
NOLC1-207ENST00000488254 ADAMTS12P58397 1594 aa16.45■□□□□ 0.22
NOLC1-207ENST00000488254 GOLGA3Q08378 1498 aa16.45■□□□□ 0.22
NOLC1-207ENST00000488254 CUL7Q14999 1698 aa16.45■□□□□ 0.22
NOLC1-207ENST00000488254 FHAD1B1AJZ9 1412 aa16.44■□□□□ 0.22
NOLC1-207ENST00000488254 MAGI1Q96QZ7 1491 aaPredicted RBP16.42■□□□□ 0.22
NOLC1-207ENST00000488254 SYNJ2O15056 1496 aa16.39■□□□□ 0.21
NOLC1-207ENST00000488254 GRIN2AQ12879 1464 aa16.37■□□□□ 0.21
NOLC1-207ENST00000488254 CHD1O14646 1710 aa16.36■□□□□ 0.21
NOLC1-207ENST00000488254 TNIKQ9UKE5 1360 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms