RNA–Protein interactions for RNA: ENST00000488198.5

CSF1-206, Transcript of colony stimulating factor 1, humanhuman

TSL 3

Gene CSF1, Length 1,009 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1-206ENST00000488198 FAM182BQ5T319 152 aa23.66■■□□□ 1.38
CSF1-206ENST00000488198 SPG7Q9UQ90 795 aa23.66■■□□□ 1.38
CSF1-206ENST00000488198 MYBBP1AQ9BQG0 1328 aaKnown RBP23.65■■□□□ 1.38
CSF1-206ENST00000488198 PCDH11XQ9BZA7 1347 aa23.64■■□□□ 1.38
CSF1-206ENST00000488198 PCDH11YQ9BZA8 1340 aa23.64■■□□□ 1.38
CSF1-206ENST00000488198 SULT6B1Q6IMI4 303 aa23.64■■□□□ 1.37
CSF1-206ENST00000488198 DDX54Q8TDD1 881 aaKnown RBP23.63■■□□□ 1.37
CSF1-206ENST00000488198 KDRP35968 1356 aa23.63■■□□□ 1.37
CSF1-206ENST00000488198 COL3A1P02461 1466 aaPredicted RBP23.62■■□□□ 1.37
CSF1-206ENST00000488198 PRKRIP1Q9H875 184 aaPredicted RBP23.62■■□□□ 1.37
CSF1-206ENST00000488198 U2SURPO15042 1029 aaKnown RBP23.61■■□□□ 1.37
CSF1-206ENST00000488198 AMOTQ4VCS5 1084 aa23.61■■□□□ 1.37
CSF1-206ENST00000488198 PLEKHO1Q53GL0 409 aaPredicted RBP23.61■■□□□ 1.37
CSF1-206ENST00000488198 RGPD2P0DJD1 1756 aa23.6■■□□□ 1.37
CSF1-206ENST00000488198 TRIM37O94972 964 aa23.58■■□□□ 1.37
CSF1-206ENST00000488198 AEBP1Q8IUX7 1158 aa23.58■■□□□ 1.37
CSF1-206ENST00000488198 BAG6P46379 1132 aa23.57■■□□□ 1.36
CSF1-206ENST00000488198 BCL11BQ9C0K0 894 aaPredicted RBP23.57■■□□□ 1.36
CSF1-206ENST00000488198 RGPD1P0DJD0 1748 aa23.56■■□□□ 1.36
CSF1-206ENST00000488198 ANP32CO43423 234 aa23.56■■□□□ 1.36
CSF1-206ENST00000488198 HMOX1P09601 288 aa23.56■■□□□ 1.36
CSF1-206ENST00000488198 IFNL2Q8IZJ0 200 aa23.55■■□□□ 1.36
CSF1-206ENST00000488198 U2AF1L5P0DN76 240 aaPredicted RBP23.54■■□□□ 1.36
CSF1-206ENST00000488198 U2AF1Q01081 240 aaKnown RBP eCLIP23.54■■□□□ 1.36
CSF1-206ENST00000488198 CYP27B1O15528 508 aa23.53■■□□□ 1.36
CSF1-206ENST00000488198 HSP90AB1P08238 724 aaKnown RBP23.53■■□□□ 1.36
CSF1-206ENST00000488198 APBA3O96018 575 aa23.52■■□□□ 1.36
CSF1-206ENST00000488198 NKX1-1Q15270 411 aaPredicted RBP23.52■■□□□ 1.36
CSF1-206ENST00000488198 FCHSD2O94868 740 aa23.51■■□□□ 1.35
CSF1-206ENST00000488198 PHKG2P15735 406 aa23.51■■□□□ 1.35
CSF1-206ENST00000488198 C1orf141Q5JVX7 400 aa23.51■■□□□ 1.35
CSF1-206ENST00000488198 ZNF530Q6P9A1 599 aaPredicted RBP23.51■■□□□ 1.35
CSF1-206ENST00000488198 PNNQ9H307 717 aaKnown RBP23.51■■□□□ 1.35
CSF1-206ENST00000488198 PKD1L3Q7Z443 1732 aa23.5■■□□□ 1.35
CSF1-206ENST00000488198 NEFMP07197 916 aa23.49■■□□□ 1.35
CSF1-206ENST00000488198 ACSBG1Q96GR2 724 aa23.49■■□□□ 1.35
CSF1-206ENST00000488198 GAS2L2Q8NHY3 880 aa23.47■■□□□ 1.35
CSF1-206ENST00000488198 SYTL4Q96C24 671 aaPredicted RBP23.47■■□□□ 1.35
CSF1-206ENST00000488198 DCAF5Q96JK2 942 aa23.47■■□□□ 1.35
CSF1-206ENST00000488198 RSPH6AQ9H0K4 717 aa23.47■■□□□ 1.35
CSF1-206ENST00000488198 PLSCR1O15162 318 aa23.46■■□□□ 1.35
CSF1-206ENST00000488198 PRKAR2BP31323 418 aa23.46■■□□□ 1.35
CSF1-206ENST00000488198 KCNQ2O43526 872 aa23.45■■□□□ 1.34
CSF1-206ENST00000488198 PRIM1P49642 420 aaKnown RBP23.45■■□□□ 1.34
CSF1-206ENST00000488198 AKAP4Q5JQC9 854 aa23.45■■□□□ 1.34
CSF1-206ENST00000488198 DEFB132Q7Z7B7 95 aa23.45■■□□□ 1.34
CSF1-206ENST00000488198 SHANK3Q9BYB0 1731 aa23.45■■□□□ 1.34
CSF1-206ENST00000488198 WDR43Q15061 677 aaKnown RBP eCLIP23.44■■□□□ 1.34
CSF1-206ENST00000488198 EN1Q05925 392 aaPredicted RBP23.43■■□□□ 1.34
CSF1-206ENST00000488198 MTHFSDQ2M296 383 aaKnown RBP23.43■■□□□ 1.34
CSF1-206ENST00000488198 EP400Q96L91 3159 aa23.42■■□□□ 1.34
CSF1-206ENST00000488198 NHSQ6T4R5 1651 aa23.42■■□□□ 1.34
CSF1-206ENST00000488198 ERVV-2B6SEH9 535 aa23.42■■□□□ 1.34
CSF1-206ENST00000488198 CAMKK2Q96RR4 588 aa23.42■■□□□ 1.34
CSF1-206ENST00000488198 TNS1Q9HBL0 1735 aaKnown RBP23.41■■□□□ 1.34
CSF1-206ENST00000488198 PTF1AQ7RTS3 328 aa23.4■■□□□ 1.34
CSF1-206ENST00000488198 TMOD3Q9NYL9 352 aa23.4■■□□□ 1.34
CSF1-206ENST00000488198 MPRIPQ6WCQ1 1025 aa23.39■■□□□ 1.33
CSF1-206ENST00000488198 MAPK8IP3Q9UPT6 1336 aa23.38■■□□□ 1.33
CSF1-206ENST00000488198 HMGB2P26583 209 aaKnown RBP23.38■■□□□ 1.33
CSF1-206ENST00000488198 EZH2Q15910 746 aaKnown RBP23.38■■□□□ 1.33
CSF1-206ENST00000488198 GNAT3A8MTJ3 354 aa23.37■■□□□ 1.33
CSF1-206ENST00000488198 CABP4P57796 275 aa23.37■■□□□ 1.33
CSF1-206ENST00000488198 SMARCC1Q92922 1105 aaPredicted RBP23.37■■□□□ 1.33
CSF1-206ENST00000488198 PHACTR3Q96KR7 559 aa23.37■■□□□ 1.33
CSF1-206ENST00000488198 SBF2Q86WG5 1849 aa23.37■■□□□ 1.33
CSF1-206ENST00000488198 MAP3K5Q99683 1374 aa23.36■■□□□ 1.33
CSF1-206ENST00000488198 DOT1LQ8TEK3 1739 aa23.35■■□□□ 1.33
CSF1-206ENST00000488198 KDM6AO15550 1401 aaPredicted RBP23.34■■□□□ 1.33
CSF1-206ENST00000488198 PIGBQ92521 554 aa23.34■■□□□ 1.33
CSF1-206ENST00000488198 PLEKHF1Q96S99 279 aa23.34■■□□□ 1.33
CSF1-206ENST00000488198 TXNRD1Q16881 649 aa23.33■■□□□ 1.33
CSF1-206ENST00000488198 SLC27A3Q5K4L6 730 aa23.33■■□□□ 1.33
CSF1-206ENST00000488198 RTF1Q92541 710 aaKnown RBP23.33■■□□□ 1.33
CSF1-206ENST00000488198 MRS2Q9HD23 443 aa23.33■■□□□ 1.33
CSF1-206ENST00000488198 RGPD3A6NKT7 1758 aaPredicted RBP23.32■■□□□ 1.32
CSF1-206ENST00000488198 RGPD4Q7Z3J3 1758 aa23.32■■□□□ 1.32
CSF1-206ENST00000488198 RNMTO43148 476 aaKnown RBP23.32■■□□□ 1.32
CSF1-206ENST00000488198 HTATSF1O43719 755 aaKnown RBP23.32■■□□□ 1.32
CSF1-206ENST00000488198 NBPF14Q5TI25 921 aa23.32■■□□□ 1.32
CSF1-206ENST00000488198 ADAMTS8Q9UP79 889 aa23.31■■□□□ 1.32
CSF1-206ENST00000488198 RUNDC1Q96C34 613 aa23.3■■□□□ 1.32
CSF1-206ENST00000488198 SLC52A2Q9HAB3 445 aa23.3■■□□□ 1.32
CSF1-206ENST00000488198 PALLDQ8WX93 1383 aa23.29■■□□□ 1.32
CSF1-206ENST00000488198 NFE2L2Q16236 605 aa23.29■■□□□ 1.32
CSF1-206ENST00000488198 NFATC2IPQ8NCF5 419 aa23.29■■□□□ 1.32
CSF1-206ENST00000488198 TEFQ10587 303 aa23.28■■□□□ 1.32
CSF1-206ENST00000488198 PROM2Q8N271 834 aa23.28■■□□□ 1.32
CSF1-206ENST00000488198 LGR6Q9HBX8 967 aa23.28■■□□□ 1.32
CSF1-206ENST00000488198 BTAF1O14981 1849 aa23.28■■□□□ 1.32
CSF1-206ENST00000488198 TOGARAM1Q9Y4F4 1720 aa23.28■■□□□ 1.32
CSF1-206ENST00000488198 LMOD3Q0VAK6 560 aa23.26■■□□□ 1.31
CSF1-206ENST00000488198 CCNL1Q9UK58 526 aaPredicted RBP23.26■■□□□ 1.31
CSF1-206ENST00000488198 DIEXFQ68CQ4 756 aaKnown RBP23.25■■□□□ 1.31
CSF1-206ENST00000488198 IL17REQ8NFR9 667 aa23.25■■□□□ 1.31
CSF1-206ENST00000488198 CEMIPQ8WUJ3 1361 aa23.25■■□□□ 1.31
CSF1-206ENST00000488198 MRC1P22897 1456 aa23.24■■□□□ 1.31
CSF1-206ENST00000488198 CCDC184Q52MB2 194 aa23.24■■□□□ 1.31
CSF1-206ENST00000488198 PNISRQ8TF01 805 aaKnown RBP23.24■■□□□ 1.31
CSF1-206ENST00000488198 ATG3Q9NT62 314 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms