RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 NUTM2BA6NNL0 878 aaPredicted RBP17.59■□□□□ 0.41
COPS7B-221ENST00000488111 NUTM2EB1AL46 878 aaPredicted RBP17.59■□□□□ 0.41
COPS7B-221ENST00000488111 NFE2L2Q16236 605 aa17.59■□□□□ 0.41
COPS7B-221ENST00000488111 NUTM2AQ8IVF1 878 aaPredicted RBP17.59■□□□□ 0.41
COPS7B-221ENST00000488111 NLRP2Q9NX02 1062 aa17.59■□□□□ 0.41
COPS7B-221ENST00000488111 RGPD5Q99666 1765 aa17.58■□□□□ 0.4
COPS7B-221ENST00000488111 NGEFQ8N5V2 710 aa17.58■□□□□ 0.4
COPS7B-221ENST00000488111 ADAMTS2O95450 1211 aa17.57■□□□□ 0.4
COPS7B-221ENST00000488111 PHF23Q9BUL5 403 aaPredicted RBP17.57■□□□□ 0.4
COPS7B-221ENST00000488111 COL18A1P39060 1754 aa17.56■□□□□ 0.4
COPS7B-221ENST00000488111 ABCA3Q99758 1704 aa17.56■□□□□ 0.4
COPS7B-221ENST00000488111 CCDC27Q2M243 656 aa17.56■□□□□ 0.4
COPS7B-221ENST00000488111 MTHFSDQ2M296 383 aaKnown RBP17.56■□□□□ 0.4
COPS7B-221ENST00000488111 STRN4Q9NRL3 753 aa17.55■□□□□ 0.4
COPS7B-221ENST00000488111 RGPD2P0DJD1 1756 aa17.55■□□□□ 0.4
COPS7B-221ENST00000488111 THUMPD2Q9BTF0 503 aaKnown RBP17.55■□□□□ 0.4
COPS7B-221ENST00000488111 CAMTA1Q9Y6Y1 1673 aa17.55■□□□□ 0.4
COPS7B-221ENST00000488111 SLFN5Q08AF3 891 aa17.54■□□□□ 0.4
COPS7B-221ENST00000488111 DCTN1Q14203 1278 aa17.54■□□□□ 0.4
COPS7B-221ENST00000488111 FAM43AQ8N2R8 423 aa17.54■□□□□ 0.4
COPS7B-221ENST00000488111 EVA1CP58658 441 aa17.53■□□□□ 0.4
COPS7B-221ENST00000488111 BTG4Q9NY30 223 aa17.53■□□□□ 0.4
COPS7B-221ENST00000488111 HSPA1LP34931 641 aa17.53■□□□□ 0.4
COPS7B-221ENST00000488111 DUSP27Q5VZP5 1158 aa17.53■□□□□ 0.4
COPS7B-221ENST00000488111 WDR63Q8IWG1 891 aa17.53■□□□□ 0.4
COPS7B-221ENST00000488111 EIF5BO60841 1220 aaKnown RBP17.52■□□□□ 0.4
COPS7B-221ENST00000488111 TOM1L2Q6ZVM7 507 aa17.52■□□□□ 0.4
COPS7B-221ENST00000488111 NCBP3Q53F19 620 aaKnown RBP17.52■□□□□ 0.39
COPS7B-221ENST00000488111 COL22A1Q8NFW1 1626 aaPredicted RBP17.51■□□□□ 0.39
COPS7B-221ENST00000488111 E9PSI1 815 aa17.51■□□□□ 0.39
COPS7B-221ENST00000488111 LARP1Q6PKG0 1096 aaKnown RBP17.51■□□□□ 0.39
COPS7B-221ENST00000488111 COL5A2P05997 1499 aaPredicted RBP17.5■□□□□ 0.39
COPS7B-221ENST00000488111 WDR17Q8IZU2 1322 aa17.5■□□□□ 0.39
COPS7B-221ENST00000488111 MCM10Q7L590 875 aa17.5■□□□□ 0.39
COPS7B-221ENST00000488111 TRMT2AQ8IZ69 625 aaKnown RBP17.5■□□□□ 0.39
COPS7B-221ENST00000488111 GAS2L2Q8NHY3 880 aa17.5■□□□□ 0.39
COPS7B-221ENST00000488111 LMO7Q8WWI1 1683 aa17.49■□□□□ 0.39
COPS7B-221ENST00000488111 JCADQ9P266 1359 aa17.49■□□□□ 0.39
COPS7B-221ENST00000488111 ABCC6O95255 1503 aa17.49■□□□□ 0.39
COPS7B-221ENST00000488111 RAPGEF4Q8WZA2 1011 aa17.48■□□□□ 0.39
COPS7B-221ENST00000488111 TSR2Q969E8 191 aaKnown RBP17.48■□□□□ 0.39
COPS7B-221ENST00000488111 KDM2BQ8NHM5 1336 aa17.48■□□□□ 0.39
COPS7B-221ENST00000488111 NCAPD2Q15021 1401 aa17.47■□□□□ 0.39
COPS7B-221ENST00000488111 SLC4A3P48751 1232 aa17.47■□□□□ 0.39
COPS7B-221ENST00000488111 LMOD3Q0VAK6 560 aa17.47■□□□□ 0.39
COPS7B-221ENST00000488111 CRBNQ96SW2 442 aa17.47■□□□□ 0.39
COPS7B-221ENST00000488111 SKAP1Q86WV1 359 aa17.47■□□□□ 0.39
COPS7B-221ENST00000488111 PLEKHO1Q53GL0 409 aaPredicted RBP17.46■□□□□ 0.39
COPS7B-221ENST00000488111 DAXXQ9UER7 740 aaPredicted RBP17.46■□□□□ 0.39
COPS7B-221ENST00000488111 RTF1Q92541 710 aaKnown RBP17.46■□□□□ 0.39
COPS7B-221ENST00000488111 TATP17735 454 aaPredicted RBP17.45■□□□□ 0.38
COPS7B-221ENST00000488111 DLG5Q8TDM6 1919 aa17.45■□□□□ 0.38
COPS7B-221ENST00000488111 GNAT3A8MTJ3 354 aa17.45■□□□□ 0.38
COPS7B-221ENST00000488111 ZNF530Q6P9A1 599 aaPredicted RBP17.45■□□□□ 0.38
COPS7B-221ENST00000488111 CARD10Q9BWT7 1032 aa17.44■□□□□ 0.38
COPS7B-221ENST00000488111 MYH16Q9H6N6 1097 aa17.44■□□□□ 0.38
COPS7B-221ENST00000488111 MEGF6O75095 1541 aa17.44■□□□□ 0.38
COPS7B-221ENST00000488111 AMOTQ4VCS5 1084 aa17.44■□□□□ 0.38
COPS7B-221ENST00000488111 PLIN1O60240 522 aa17.43■□□□□ 0.38
COPS7B-221ENST00000488111 C8orf37Q96NL8 207 aa17.43■□□□□ 0.38
COPS7B-221ENST00000488111 FRAT2O75474 233 aaPredicted RBP17.43■□□□□ 0.38
COPS7B-221ENST00000488111 FAM161AQ3B820 660 aa17.43■□□□□ 0.38
COPS7B-221ENST00000488111 FAM208AQ9UK61 1670 aaKnown RBP17.42■□□□□ 0.38
COPS7B-221ENST00000488111 IL16Q14005 1332 aa17.42■□□□□ 0.38
COPS7B-221ENST00000488111 COL14A1Q05707 1796 aaKnown RBP17.42■□□□□ 0.38
COPS7B-221ENST00000488111 C8orf34Q49A92 452 aa17.42■□□□□ 0.38
COPS7B-221ENST00000488111 IL17REQ8NFR9 667 aa17.42■□□□□ 0.38
COPS7B-221ENST00000488111 MAP3K5Q99683 1374 aa17.42■□□□□ 0.38
COPS7B-221ENST00000488111 CALD1Q05682 793 aaKnown RBP17.42■□□□□ 0.38
COPS7B-221ENST00000488111 MPRIPQ6WCQ1 1025 aa17.41■□□□□ 0.38
COPS7B-221ENST00000488111 CENPQQ7L2Z9 268 aaPredicted RBP17.41■□□□□ 0.38
COPS7B-221ENST00000488111 NGLY1Q96IV0 654 aa17.41■□□□□ 0.38
COPS7B-221ENST00000488111 LGR6Q9HBX8 967 aa17.41■□□□□ 0.38
COPS7B-221ENST00000488111 MIS18AQ9NYP9 233 aa17.41■□□□□ 0.38
COPS7B-221ENST00000488111 AKAP4Q5JQC9 854 aa17.4■□□□□ 0.38
COPS7B-221ENST00000488111 C1orf141Q5JVX7 400 aa17.4■□□□□ 0.38
COPS7B-221ENST00000488111 CRB1P82279 1406 aa17.4■□□□□ 0.38
COPS7B-221ENST00000488111 GNAI1P63096 354 aa17.4■□□□□ 0.38
COPS7B-221ENST00000488111 EXOSC9Q06265 439 aaKnown RBP17.4■□□□□ 0.38
COPS7B-221ENST00000488111 MBIPQ9NS73 344 aa17.4■□□□□ 0.38
COPS7B-221ENST00000488111 IL2RBP14784 551 aa17.39■□□□□ 0.38
COPS7B-221ENST00000488111 CFAP44Q96MT7 982 aa17.39■□□□□ 0.38
COPS7B-221ENST00000488111 IFT57Q9NWB7 429 aa17.39■□□□□ 0.38
COPS7B-221ENST00000488111 SPATA31A6Q5VVP1 1343 aa17.39■□□□□ 0.37
COPS7B-221ENST00000488111 HTATSF1O43719 755 aaKnown RBP17.39■□□□□ 0.37
COPS7B-221ENST00000488111 ZNF853P0CG23 659 aa17.39■□□□□ 0.37
COPS7B-221ENST00000488111 SPG7Q9UQ90 795 aa17.39■□□□□ 0.37
COPS7B-221ENST00000488111 LRP6O75581 1613 aa17.38■□□□□ 0.37
COPS7B-221ENST00000488111 CCDC9Q9Y3X0 531 aaKnown RBP17.37■□□□□ 0.37
COPS7B-221ENST00000488111 CYP27B1O15528 508 aa17.36■□□□□ 0.37
COPS7B-221ENST00000488111 PHKG2P15735 406 aa17.36■□□□□ 0.37
COPS7B-221ENST00000488111 MEX3CQ5U5Q3 659 aaKnown RBP17.36■□□□□ 0.37
COPS7B-221ENST00000488111 ZCRB1Q8TBF4 217 aaKnown RBP17.36■□□□□ 0.37
COPS7B-221ENST00000488111 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.36■□□□□ 0.378e-10■■■□□ 14.8
COPS7B-221ENST00000488111 ELL2O00472 640 aaPredicted RBP17.36■□□□□ 0.37
COPS7B-221ENST00000488111 CHL1O00533 1208 aa17.36■□□□□ 0.37
COPS7B-221ENST00000488111 PLCH1Q4KWH8 1693 aa17.36■□□□□ 0.37
COPS7B-221ENST00000488111 SLIT2O94813 1529 aa17.35■□□□□ 0.37
COPS7B-221ENST00000488111 IFNL2Q8IZJ0 200 aa17.35■□□□□ 0.37
COPS7B-221ENST00000488111 OVOS2A0A0G2JMS6 1433 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms