RNA–Protein interactions for RNA: ENST00000487465.5

EMC3-204, Transcript of ER membrane protein complex subunit 3, humanhuman

TSL 1 (best)

Gene EMC3, Length 1,909 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMC3-204ENST00000487465 BARGINQ6ZT62 677 aa13.9□□□□□ -0.18
EMC3-204ENST00000487465 FAM9BQ8IZU0 186 aa13.9□□□□□ -0.18
EMC3-204ENST00000487465 CDK12Q9NYV4 1490 aaPredicted RBP13.9□□□□□ -0.19
EMC3-204ENST00000487465 FAM182BQ5T319 152 aa13.89□□□□□ -0.19
EMC3-204ENST00000487465 COL3A1P02461 1466 aaPredicted RBP13.88□□□□□ -0.19
EMC3-204ENST00000487465 DISP2A7MBM2 1401 aa13.88□□□□□ -0.19
EMC3-204ENST00000487465 AEBP1Q8IUX7 1158 aa13.88□□□□□ -0.19
EMC3-204ENST00000487465 PNISRQ8TF01 805 aaKnown RBP13.88□□□□□ -0.19
EMC3-204ENST00000487465 FAM208AQ9UK61 1670 aaKnown RBP13.87□□□□□ -0.19
EMC3-204ENST00000487465 WDR43Q15061 677 aaKnown RBP eCLIP13.87□□□□□ -0.19
EMC3-204ENST00000487465 THRAP3Q9Y2W1 955 aaKnown RBP13.87□□□□□ -0.19
EMC3-204ENST00000487465 THSD7AQ9UPZ6 1657 aa13.86□□□□□ -0.19
EMC3-204ENST00000487465 DIAPH1O60610 1272 aaKnown RBP13.86□□□□□ -0.19
EMC3-204ENST00000487465 A0A0G2JS52 829 aa13.86□□□□□ -0.19
EMC3-204ENST00000487465 MYT1Q01538 1121 aa13.86□□□□□ -0.19
EMC3-204ENST00000487465 FBXO3Q9UK99 471 aa13.86□□□□□ -0.19
EMC3-204ENST00000487465 IGSF1Q8N6C5 1336 aa13.86□□□□□ -0.19
EMC3-204ENST00000487465 NCAPD2Q15021 1401 aa13.86□□□□□ -0.19
EMC3-204ENST00000487465 MEGF6O75095 1541 aa13.86□□□□□ -0.19
EMC3-204ENST00000487465 NUDCQ9Y266 331 aa13.85□□□□□ -0.19
EMC3-204ENST00000487465 U2SURPO15042 1029 aaKnown RBP13.84□□□□□ -0.19
EMC3-204ENST00000487465 BRWD3Q6RI45 1802 aa13.84□□□□□ -0.19
EMC3-204ENST00000487465 IL2RBP14784 551 aa13.84□□□□□ -0.19
EMC3-204ENST00000487465 ADAMTS8Q9UP79 889 aa13.83□□□□□ -0.2
EMC3-204ENST00000487465 RGPD1P0DJD0 1748 aa13.83□□□□□ -0.2
EMC3-204ENST00000487465 HMOX1P09601 288 aa13.82□□□□□ -0.2
EMC3-204ENST00000487465 U2AF1L5P0DN76 240 aaPredicted RBP13.82□□□□□ -0.2
EMC3-204ENST00000487465 U2AF1Q01081 240 aaKnown RBP eCLIP13.82□□□□□ -0.2
EMC3-204ENST00000487465 SULT6B1Q6IMI4 303 aa13.82□□□□□ -0.2
EMC3-204ENST00000487465 VSIG10Q8N0Z9 540 aa13.82□□□□□ -0.2
EMC3-204ENST00000487465 MARCH10Q8NA82 808 aaPredicted RBP13.82□□□□□ -0.2
EMC3-204ENST00000487465 DDB1Q16531 1140 aa13.82□□□□□ -0.2
EMC3-204ENST00000487465 KRT27Q7Z3Y8 459 aa13.82□□□□□ -0.2
EMC3-204ENST00000487465 KDRP35968 1356 aa13.81□□□□□ -0.2
EMC3-204ENST00000487465 TPRNQ4KMQ1 711 aa13.81□□□□□ -0.2
EMC3-204ENST00000487465 LRRC37A3O60309 1634 aa13.8□□□□□ -0.2
EMC3-204ENST00000487465 PTF1AQ7RTS3 328 aa13.8□□□□□ -0.2
EMC3-204ENST00000487465 OVOS2A0A0G2JMS6 1433 aa13.8□□□□□ -0.2
EMC3-204ENST00000487465 PARP4Q9UKK3 1724 aaKnown RBP13.8□□□□□ -0.2
EMC3-204ENST00000487465 EXOC5O00471 708 aa13.79□□□□□ -0.2
EMC3-204ENST00000487465 CDCA7Q9BWT1 371 aaPredicted RBP13.79□□□□□ -0.2
EMC3-204ENST00000487465 WNK3Q9BYP7 1800 aa13.79□□□□□ -0.2
EMC3-204ENST00000487465 CYP27B1O15528 508 aa13.78□□□□□ -0.2
EMC3-204ENST00000487465 RAPGEF4Q8WZA2 1011 aa13.78□□□□□ -0.2
EMC3-204ENST00000487465 VASPP50552 380 aaPredicted RBP13.78□□□□□ -0.2
EMC3-204ENST00000487465 PDE3BQ13370 1112 aa13.78□□□□□ -0.2
EMC3-204ENST00000487465 CCDC146Q8IYE0 955 aa13.78□□□□□ -0.2
EMC3-204ENST00000487465 DDX54Q8TDD1 881 aaKnown RBP13.78□□□□□ -0.2
EMC3-204ENST00000487465 TNS2Q63HR2 1409 aa13.77□□□□□ -0.2
EMC3-204ENST00000487465 ZCRB1Q8TBF4 217 aaKnown RBP13.77□□□□□ -0.21
EMC3-204ENST00000487465 PHACTR3Q96KR7 559 aa13.77□□□□□ -0.21
EMC3-204ENST00000487465 SENP3-EIF4A1A0A087X0R7 540 aa13.76□□□□□ -0.21
EMC3-204ENST00000487465 TATP17735 454 aaPredicted RBP13.76□□□□□ -0.21
EMC3-204ENST00000487465 HNRNPUQ00839 825 aaKnown RBP eCLIP13.76□□□□□ -0.21
EMC3-204ENST00000487465 IFNLR1Q8IU57 520 aaPredicted RBP13.76□□□□□ -0.21
EMC3-204ENST00000487465 RSPH6AQ9H0K4 717 aa13.76□□□□□ -0.21
EMC3-204ENST00000487465 SHANK3Q9BYB0 1731 aa13.76□□□□□ -0.21
EMC3-204ENST00000487465 KCNQ2O43526 872 aa13.74□□□□□ -0.21
EMC3-204ENST00000487465 FCHSD2O94868 740 aa13.74□□□□□ -0.21
EMC3-204ENST00000487465 PNNQ9H307 717 aaKnown RBP13.74□□□□□ -0.21
EMC3-204ENST00000487465 PRKAR2BP31323 418 aa13.74□□□□□ -0.21
EMC3-204ENST00000487465 UPF1Q92900 1129 aaKnown RBP eCLIP13.74□□□□□ -0.21
EMC3-204ENST00000487465 RUNDC1Q96C34 613 aa13.74□□□□□ -0.21
EMC3-204ENST00000487465 SPDYE4A6NLX3 237 aa13.73□□□□□ -0.21
EMC3-204ENST00000487465 MTHFSDQ2M296 383 aaKnown RBP13.73□□□□□ -0.21
EMC3-204ENST00000487465 NEFMP07197 916 aa13.72□□□□□ -0.21
EMC3-204ENST00000487465 SAMD1Q6SPF0 538 aaPredicted RBP13.72□□□□□ -0.21
EMC3-204ENST00000487465 PLEKHF1Q96S99 279 aa13.72□□□□□ -0.21
EMC3-204ENST00000487465 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.72□□□□□ -0.21
EMC3-204ENST00000487465 MAPK8IP3Q9UPT6 1336 aa13.72□□□□□ -0.21
EMC3-204ENST00000487465 TRIM37O94972 964 aa13.72□□□□□ -0.21
EMC3-204ENST00000487465 FAM196AQ6ZSG2 479 aa13.72□□□□□ -0.21
EMC3-204ENST00000487465 ACSBG1Q96GR2 724 aa13.72□□□□□ -0.21
EMC3-204ENST00000487465 PKD1L3Q7Z443 1732 aa13.71□□□□□ -0.21
EMC3-204ENST00000487465 PHKG2P15735 406 aa13.71□□□□□ -0.21
EMC3-204ENST00000487465 SALL2Q9Y467 1007 aaPredicted RBP13.71□□□□□ -0.21
EMC3-204ENST00000487465 APAF1O14727 1248 aa13.7□□□□□ -0.22
EMC3-204ENST00000487465 SPG7Q9UQ90 795 aa13.7□□□□□ -0.22
EMC3-204ENST00000487465 PCDH11XQ9BZA7 1347 aa13.7□□□□□ -0.22
EMC3-204ENST00000487465 PCDH11YQ9BZA8 1340 aa13.7□□□□□ -0.22
EMC3-204ENST00000487465 SOCS7O14512 581 aa13.7□□□□□ -0.22
EMC3-204ENST00000487465 BCL9O00512 1426 aa13.7□□□□□ -0.22
EMC3-204ENST00000487465 NKX1-1Q15270 411 aaPredicted RBP13.69□□□□□ -0.22
EMC3-204ENST00000487465 NEUROD2Q15784 382 aa13.69□□□□□ -0.22
EMC3-204ENST00000487465 PLEKHO1Q53GL0 409 aaPredicted RBP13.69□□□□□ -0.22
EMC3-204ENST00000487465 ZNF530Q6P9A1 599 aaPredicted RBP13.69□□□□□ -0.22
EMC3-204ENST00000487465 NEFLP07196 543 aa13.68□□□□□ -0.22
EMC3-204ENST00000487465 PRIM1P49642 420 aaKnown RBP13.68□□□□□ -0.22
EMC3-204ENST00000487465 MPRIPQ6WCQ1 1025 aa13.68□□□□□ -0.22
EMC3-204ENST00000487465 RRP7AQ9Y3A4 280 aaKnown RBP13.68□□□□□ -0.22
EMC3-204ENST00000487465 KAT6BQ8WYB5 2073 aa13.68□□□□□ -0.22
EMC3-204ENST00000487465 KDM6AO15550 1401 aaPredicted RBP13.68□□□□□ -0.22
EMC3-204ENST00000487465 AMOTQ4VCS5 1084 aa13.68□□□□□ -0.22
EMC3-204ENST00000487465 DEFB132Q7Z7B7 95 aa13.68□□□□□ -0.22
EMC3-204ENST00000487465 IFNL2Q8IZJ0 200 aa13.68□□□□□ -0.22
EMC3-204ENST00000487465 LGR6Q9HBX8 967 aa13.68□□□□□ -0.22
EMC3-204ENST00000487465 U3KPZ7 1027 aaPredicted RBP13.68□□□□□ -0.22
EMC3-204ENST00000487465 ZBED9Q6R2W3 1325 aa13.67□□□□□ -0.22
EMC3-204ENST00000487465 SBF2Q86WG5 1849 aa13.66□□□□□ -0.22
EMC3-204ENST00000487465 PLEKHG2Q9H7P9 1386 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms