RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 EMILIN1Q9Y6C2 1016 aa17.18■□□□□ 0.34
SREBF1-215ENST00000487401 LTN1O94822 1766 aa17.16■□□□□ 0.34
SREBF1-215ENST00000487401 LRRC4BQ9NT99 713 aa17.16■□□□□ 0.34
SREBF1-215ENST00000487401 WNK3Q9BYP7 1800 aa17.16■□□□□ 0.34
SREBF1-215ENST00000487401 MTFR1LQ9H019 292 aa17.15■□□□□ 0.34
SREBF1-215ENST00000487401 MEGF6O75095 1541 aa17.15■□□□□ 0.34
SREBF1-215ENST00000487401 RGPD3A6NKT7 1758 aaPredicted RBP17.13■□□□□ 0.33
SREBF1-215ENST00000487401 RGPD4Q7Z3J3 1758 aa17.13■□□□□ 0.33
SREBF1-215ENST00000487401 TNNT2P45379 298 aaPredicted RBP17.13■□□□□ 0.33
SREBF1-215ENST00000487401 ZNF827Q17R98 1081 aa17.13■□□□□ 0.33
SREBF1-215ENST00000487401 PANK3Q9H999 370 aa17.13■□□□□ 0.33
SREBF1-215ENST00000487401 WASHC2AQ641Q2 1341 aa17.13■□□□□ 0.33
SREBF1-215ENST00000487401 PTGER2P43116 358 aa17.12■□□□□ 0.33
SREBF1-215ENST00000487401 POLKQ9UBT6 870 aa17.12■□□□□ 0.33
SREBF1-215ENST00000487401 PCDH11XQ9BZA7 1347 aa17.12■□□□□ 0.33
SREBF1-215ENST00000487401 PCDH11YQ9BZA8 1340 aa17.12■□□□□ 0.33
SREBF1-215ENST00000487401 AKT1S1Q96B36 256 aa17.11■□□□□ 0.33
SREBF1-215ENST00000487401 TFCP2L1Q9NZI6 479 aa17.11■□□□□ 0.33
SREBF1-215ENST00000487401 SBF2Q86WG5 1849 aa17.11■□□□□ 0.33
SREBF1-215ENST00000487401 NHSQ6T4R5 1651 aa17.1■□□□□ 0.33
SREBF1-215ENST00000487401 KCNQ4P56696 695 aa17.1■□□□□ 0.33
SREBF1-215ENST00000487401 CCNL1Q9UK58 526 aaPredicted RBP17.1■□□□□ 0.33
SREBF1-215ENST00000487401 SPG7Q9UQ90 795 aa17.1■□□□□ 0.33
SREBF1-215ENST00000487401 EYA1Q99502 592 aa17.09■□□□□ 0.33
SREBF1-215ENST00000487401 FAM208AQ9UK61 1670 aaKnown RBP17.08■□□□□ 0.32
SREBF1-215ENST00000487401 NSD2O96028 1365 aa17.08■□□□□ 0.32
SREBF1-215ENST00000487401 CYP27B1O15528 508 aa17.08■□□□□ 0.32
SREBF1-215ENST00000487401 MPRIPQ6WCQ1 1025 aa17.08■□□□□ 0.32
SREBF1-215ENST00000487401 SLC16A10Q8TF71 515 aa17.08■□□□□ 0.32
SREBF1-215ENST00000487401 ARXQ96QS3 562 aa17.08■□□□□ 0.32
SREBF1-215ENST00000487401 HMGB2P26583 209 aaKnown RBP17.07■□□□□ 0.32
SREBF1-215ENST00000487401 MORC1Q86VD1 984 aa17.06■□□□□ 0.32
SREBF1-215ENST00000487401 SGIP1Q9BQI5 828 aa17.06■□□□□ 0.32
SREBF1-215ENST00000487401 FHDC1Q9C0D6 1143 aaPredicted RBP17.06■□□□□ 0.32
SREBF1-215ENST00000487401 KNSTRNQ9Y448 316 aa17.06■□□□□ 0.32
SREBF1-215ENST00000487401 MSH5O43196 834 aa17.05■□□□□ 0.32
SREBF1-215ENST00000487401 YY1P25490 414 aa17.05■□□□□ 0.32
SREBF1-215ENST00000487401 POLD1P28340 1107 aa17.05■□□□□ 0.32
SREBF1-215ENST00000487401 EIF4A2Q14240 407 aaKnown RBP17.05■□□□□ 0.32
SREBF1-215ENST00000487401 SMARCC1Q92922 1105 aaPredicted RBP17.05■□□□□ 0.32
SREBF1-215ENST00000487401 SYT17Q9BSW7 474 aa17.05■□□□□ 0.32
SREBF1-215ENST00000487401 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.05■□□□□ 0.32
SREBF1-215ENST00000487401 PNPLA7Q6ZV29 1317 aa17.04■□□□□ 0.32
SREBF1-215ENST00000487401 NKX1-1Q15270 411 aaPredicted RBP17.04■□□□□ 0.32
SREBF1-215ENST00000487401 IFNL2Q8IZJ0 200 aa17.02■□□□□ 0.32
SREBF1-215ENST00000487401 PIGBQ92521 554 aa17.02■□□□□ 0.32
SREBF1-215ENST00000487401 CASZ1Q86V15 1759 aa17.02■□□□□ 0.31
SREBF1-215ENST00000487401 PALLDQ8WX93 1383 aa17.02■□□□□ 0.31
SREBF1-215ENST00000487401 MYOM1P52179 1685 aa17.01■□□□□ 0.31
SREBF1-215ENST00000487401 BTAF1O14981 1849 aa17■□□□□ 0.31
SREBF1-215ENST00000487401 PHKG2P15735 406 aa17■□□□□ 0.31
SREBF1-215ENST00000487401 NCAPD2Q15021 1401 aa17■□□□□ 0.31
SREBF1-215ENST00000487401 KLHL34Q8N239 644 aa17■□□□□ 0.31
SREBF1-215ENST00000487401 TMOD3Q9NYL9 352 aa17■□□□□ 0.31
SREBF1-215ENST00000487401 KIF20BQ96Q89 1820 aa17■□□□□ 0.31
SREBF1-215ENST00000487401 COL23A1Q86Y22 540 aaPredicted RBP16.99■□□□□ 0.31
SREBF1-215ENST00000487401 FLAD1Q8NFF5 587 aa16.99■□□□□ 0.31
SREBF1-215ENST00000487401 PAPPAQ13219 1627 aa16.99■□□□□ 0.31
SREBF1-215ENST00000487401 PLEKHO1Q53GL0 409 aaPredicted RBP16.98■□□□□ 0.31
SREBF1-215ENST00000487401 IGSF1Q8N6C5 1336 aa16.97■□□□□ 0.31
SREBF1-215ENST00000487401 AK7Q96M32 723 aa16.97■□□□□ 0.31
SREBF1-215ENST00000487401 KIF7Q2M1P5 1343 aa16.96■□□□□ 0.31
SREBF1-215ENST00000487401 HSP90AB1P08238 724 aaKnown RBP16.96■□□□□ 0.31
SREBF1-215ENST00000487401 RGPD2P0DJD1 1756 aa16.95■□□□□ 0.3
SREBF1-215ENST00000487401 MAP3K5Q99683 1374 aa16.95■□□□□ 0.3
SREBF1-215ENST00000487401 LOC102724428A0A0B4J2F2 783 aa16.95■□□□□ 0.3
SREBF1-215ENST00000487401 SIK1P57059 783 aa16.95■□□□□ 0.3
SREBF1-215ENST00000487401 AMOTQ4VCS5 1084 aa16.95■□□□□ 0.3
SREBF1-215ENST00000487401 ASAP1Q9ULH1 1129 aa16.95■□□□□ 0.3
SREBF1-215ENST00000487401 DOT1LQ8TEK3 1739 aa16.94■□□□□ 0.3
SREBF1-215ENST00000487401 GPR162Q16538 588 aa16.94■□□□□ 0.3
SREBF1-215ENST00000487401 AMER1Q5JTC6 1135 aaPredicted RBP16.94■□□□□ 0.3
SREBF1-215ENST00000487401 MSL1Q68DK7 614 aa16.94■□□□□ 0.3
SREBF1-215ENST00000487401 ZNF530Q6P9A1 599 aaPredicted RBP16.94■□□□□ 0.3
SREBF1-215ENST00000487401 PLEKHG2Q9H7P9 1386 aa16.93■□□□□ 0.3
SREBF1-215ENST00000487401 ERVV-2B6SEH9 535 aa16.93■□□□□ 0.3
SREBF1-215ENST00000487401 SULT6B1Q6IMI4 303 aa16.93■□□□□ 0.3
SREBF1-215ENST00000487401 DCAF5Q96JK2 942 aa16.93■□□□□ 0.3
SREBF1-215ENST00000487401 ATP6V1AP38606 617 aa16.92■□□□□ 0.3
SREBF1-215ENST00000487401 C1orf141Q5JVX7 400 aa16.92■□□□□ 0.3
SREBF1-215ENST00000487401 AEBP1Q8IUX7 1158 aa16.92■□□□□ 0.3
SREBF1-215ENST00000487401 ATG3Q9NT62 314 aa16.92■□□□□ 0.3
SREBF1-215ENST00000487401 SHANK3Q9BYB0 1731 aa16.91■□□□□ 0.3
SREBF1-215ENST00000487401 PHF14O94880 888 aa16.91■□□□□ 0.3
SREBF1-215ENST00000487401 IL13P35225 146 aa16.91■□□□□ 0.3
SREBF1-215ENST00000487401 CABP4P57796 275 aa16.91■□□□□ 0.3
SREBF1-215ENST00000487401 PELP1Q8IZL8 1130 aaKnown RBP16.91■□□□□ 0.3
SREBF1-215ENST00000487401 KAT6BQ8WYB5 2073 aa16.9■□□□□ 0.3
SREBF1-215ENST00000487401 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.9■□□□□ 0.3
SREBF1-215ENST00000487401 MTHFSP49914 203 aa16.9■□□□□ 0.3
SREBF1-215ENST00000487401 LINC00116Q8NCU8 138 aa16.9■□□□□ 0.3
SREBF1-215ENST00000487401 SSFA2P28290 1259 aa16.89■□□□□ 0.29
SREBF1-215ENST00000487401 CC2D1BQ5T0F9 858 aaKnown RBP16.89■□□□□ 0.29
SREBF1-215ENST00000487401 RBM42Q9BTD8 480 aaKnown RBP16.89■□□□□ 0.29
SREBF1-215ENST00000487401 GNPATO15228 680 aa16.88■□□□□ 0.29
SREBF1-215ENST00000487401 ITPK1Q13572 414 aa16.88■□□□□ 0.29
SREBF1-215ENST00000487401 SMIM5Q71RC9 77 aa16.88■□□□□ 0.29
SREBF1-215ENST00000487401 NLGN2Q8NFZ4 835 aa16.88■□□□□ 0.29
SREBF1-215ENST00000487401 PER1O15534 1290 aaPredicted RBP16.87■□□□□ 0.29
SREBF1-215ENST00000487401 CNGB1Q14028 1251 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms