RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 BMP2P12643 396 aa8.66□□□□□ -1.02
LINC00888-204ENST00000487386 SKIP12755 728 aa8.66□□□□□ -1.02
LINC00888-204ENST00000487386 SNRPBP14678 240 aaKnown RBP8.66□□□□□ -1.02
LINC00888-204ENST00000487386 RELBQ01201 579 aa8.66□□□□□ -1.02
LINC00888-204ENST00000487386 C6orf118Q5T5N4 469 aa8.66□□□□□ -1.02
LINC00888-204ENST00000487386 TBC1D9Q6ZT07 1266 aa8.66□□□□□ -1.02
LINC00888-204ENST00000487386 C14orf37Q86TY3 774 aa8.66□□□□□ -1.02
LINC00888-204ENST00000487386 CALR3Q96L12 384 aaKnown RBP8.66□□□□□ -1.02
LINC00888-204ENST00000487386 SOS2Q07890 1332 aaPredicted RBP8.65□□□□□ -1.02
LINC00888-204ENST00000487386 C11orf95C9JLR9 678 aaPredicted RBP8.65□□□□□ -1.02
LINC00888-204ENST00000487386 ATP5J2-PTCD1G3V325 749 aa8.65□□□□□ -1.02
LINC00888-204ENST00000487386 MYCP01106 439 aaPredicted RBP8.65□□□□□ -1.02
LINC00888-204ENST00000487386 OXLD1Q5BKU9 147 aa8.65□□□□□ -1.02
LINC00888-204ENST00000487386 ATP9BO43861 1147 aa8.64□□□□□ -1.03
LINC00888-204ENST00000487386 CYP2U1Q7Z449 544 aa8.64□□□□□ -1.03
LINC00888-204ENST00000487386 PLEKHM2Q8IWE5 1019 aa8.64□□□□□ -1.03
LINC00888-204ENST00000487386 SIRT1Q96EB6 747 aa8.64□□□□□ -1.03
LINC00888-204ENST00000487386 ZNF395Q9H8N7 513 aaPredicted RBP8.64□□□□□ -1.03
LINC00888-204ENST00000487386 USP17L5A8MUK1 530 aa8.63□□□□□ -1.03
LINC00888-204ENST00000487386 GNRH1P01148 92 aa8.62□□□□□ -1.03
LINC00888-204ENST00000487386 CTSOP43234 321 aaPredicted RBP8.62□□□□□ -1.03
LINC00888-204ENST00000487386 NCOA4Q13772 614 aa8.62□□□□□ -1.03
LINC00888-204ENST00000487386 EML3Q32P44 896 aa8.62□□□□□ -1.03
LINC00888-204ENST00000487386 INSM2Q96T92 566 aaPredicted RBP8.62□□□□□ -1.03
LINC00888-204ENST00000487386 PPP1R12CQ9BZL4 782 aa8.62□□□□□ -1.03
LINC00888-204ENST00000487386 ESF1Q9H501 851 aaKnown RBP8.62□□□□□ -1.03
LINC00888-204ENST00000487386 TFIP11Q9UBB9 837 aaKnown RBP8.62□□□□□ -1.03
LINC00888-204ENST00000487386 A0A1W2PRU2 124 aa8.61□□□□□ -1.03
LINC00888-204ENST00000487386 PALM3A6NDB9 673 aaPredicted RBP8.61□□□□□ -1.03
LINC00888-204ENST00000487386 ERICH6Q7L0X2 663 aa8.61□□□□□ -1.03
LINC00888-204ENST00000487386 DEPDC4Q8N2C3 294 aa8.61□□□□□ -1.03
LINC00888-204ENST00000487386 PCDHGA11Q9Y5H2 935 aa8.61□□□□□ -1.03
LINC00888-204ENST00000487386 USP17L3A6NCW0 530 aa8.6□□□□□ -1.03
LINC00888-204ENST00000487386 USP17L4A6NCW7 530 aa8.6□□□□□ -1.03
LINC00888-204ENST00000487386 TTLL8A6PVC2 850 aa8.6□□□□□ -1.03
LINC00888-204ENST00000487386 CLN3Q13286 438 aa8.6□□□□□ -1.03
LINC00888-204ENST00000487386 USP17L2Q6R6M4 530 aa8.6□□□□□ -1.03
LINC00888-204ENST00000487386 USP17L1Q7RTZ2 530 aa8.6□□□□□ -1.03
LINC00888-204ENST00000487386 MAFBQ9Y5Q3 323 aaPredicted RBP8.6□□□□□ -1.03
LINC00888-204ENST00000487386 RNF144AP50876 292 aaPredicted RBP8.59□□□□□ -1.03
LINC00888-204ENST00000487386 FOXD4L5Q5VV16 416 aaPredicted RBP8.59□□□□□ -1.03
LINC00888-204ENST00000487386 XAGE2Q96GT9 111 aa8.59□□□□□ -1.03
LINC00888-204ENST00000487386 ARHGEF10LQ9HCE6 1279 aa8.59□□□□□ -1.03
LINC00888-204ENST00000487386 DNMT3LQ9UJW3 386 aa8.59□□□□□ -1.03
LINC00888-204ENST00000487386 NOD1Q9Y239 953 aa8.59□□□□□ -1.03
LINC00888-204ENST00000487386 HRH3Q9Y5N1 445 aa8.59□□□□□ -1.03
LINC00888-204ENST00000487386 IL2RAP01589 272 aa8.58□□□□□ -1.04
LINC00888-204ENST00000487386 GPC1P35052 558 aa8.58□□□□□ -1.04
LINC00888-204ENST00000487386 RNF217Q8TC41 542 aa8.58□□□□□ -1.04
LINC00888-204ENST00000487386 SOBPA7XYQ1 873 aa8.57□□□□□ -1.04
LINC00888-204ENST00000487386 MEN1O00255 615 aa8.57□□□□□ -1.04
LINC00888-204ENST00000487386 SCNN1DP51172 638 aa8.57□□□□□ -1.04
LINC00888-204ENST00000487386 CFAP70Q5T0N1 1121 aa8.57□□□□□ -1.04
LINC00888-204ENST00000487386 ESYT1Q9BSJ8 1104 aa8.57□□□□□ -1.04
LINC00888-204ENST00000487386 ETNK1Q9HBU6 452 aa8.57□□□□□ -1.04
LINC00888-204ENST00000487386 POLMQ9NP87 494 aaPredicted RBP8.57□□□□□ -1.04
LINC00888-204ENST00000487386 WASLO00401 505 aaPredicted RBP8.56□□□□□ -1.04
LINC00888-204ENST00000487386 ZBTB7BO15156 539 aaPredicted RBP8.56□□□□□ -1.04
LINC00888-204ENST00000487386 MAN1A2O60476 641 aa8.56□□□□□ -1.04
LINC00888-204ENST00000487386 STAU1O95793 577 aaKnown RBP8.56□□□□□ -1.04
LINC00888-204ENST00000487386 GTF2IP78347 998 aa8.56□□□□□ -1.04
LINC00888-204ENST00000487386 CNKSR1Q969H4 720 aa8.56□□□□□ -1.04
LINC00888-204ENST00000487386 GRIP2Q9C0E4 1043 aa8.56□□□□□ -1.04
LINC00888-204ENST00000487386 RAB6BQ9NRW1 208 aa8.56□□□□□ -1.04
LINC00888-204ENST00000487386 TIMELESSQ9UNS1 1208 aa8.56□□□□□ -1.04
LINC00888-204ENST00000487386 ARID3CA6NKF2 412 aa8.55□□□□□ -1.04
LINC00888-204ENST00000487386 FIGNL2A6NMB9 653 aa8.55□□□□□ -1.04
LINC00888-204ENST00000487386 CLDN10P78369 228 aa8.55□□□□□ -1.04
LINC00888-204ENST00000487386 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.55□□□□□ -1.04
LINC00888-204ENST00000487386 ESCO1Q5FWF5 840 aa8.55□□□□□ -1.04
LINC00888-204ENST00000487386 KANK4Q5T7N3 995 aaPredicted RBP8.55□□□□□ -1.04
LINC00888-204ENST00000487386 TRIM50Q86XT4 487 aa8.55□□□□□ -1.04
LINC00888-204ENST00000487386 NLRP3Q96P20 1036 aa8.55□□□□□ -1.04
LINC00888-204ENST00000487386 MKRN1Q9UHC7 482 aaKnown RBP8.55□□□□□ -1.04
LINC00888-204ENST00000487386 TMEM229AB2RXF0 380 aa8.54□□□□□ -1.04
LINC00888-204ENST00000487386 INHAP05111 366 aa8.54□□□□□ -1.04
LINC00888-204ENST00000487386 GDF10P55107 478 aa8.54□□□□□ -1.04
LINC00888-204ENST00000487386 CENPCQ03188 943 aa8.54□□□□□ -1.04
LINC00888-204ENST00000487386 FHDC1Q9C0D6 1143 aaPredicted RBP8.54□□□□□ -1.04
LINC00888-204ENST00000487386 C1orf115Q9H7X2 142 aa8.54□□□□□ -1.04
LINC00888-204ENST00000487386 DKK1O94907 266 aa8.53□□□□□ -1.04
LINC00888-204ENST00000487386 LMOD1P29536 600 aaPredicted RBP8.53□□□□□ -1.04
LINC00888-204ENST00000487386 ATP1A2P50993 1020 aa8.52□□□□□ -1.05
LINC00888-204ENST00000487386 LARGE2Q8N3Y3 721 aa8.52□□□□□ -1.05
LINC00888-204ENST00000487386 OGFOD1Q8N543 542 aa8.52□□□□□ -1.05
LINC00888-204ENST00000487386 ZNF775Q96BV0 537 aaPredicted RBP8.52□□□□□ -1.05
LINC00888-204ENST00000487386 SLC4A9Q96Q91 983 aa8.52□□□□□ -1.05
LINC00888-204ENST00000487386 DNAAF2Q9NVR5 837 aaKnown RBP8.52□□□□□ -1.05
LINC00888-204ENST00000487386 KIAA1024Q9UPX6 916 aa8.52□□□□□ -1.05
LINC00888-204ENST00000487386 LYSMD3Q7Z3D4 306 aa8.51□□□□□ -1.05
LINC00888-204ENST00000487386 SERPINA10Q9UK55 444 aa8.51□□□□□ -1.05
LINC00888-204ENST00000487386 SPATA31C2B4DYI2 1134 aa8.5□□□□□ -1.05
LINC00888-204ENST00000487386 SRPK2P78362 688 aaKnown RBP8.5□□□□□ -1.05
LINC00888-204ENST00000487386 PTSQ03393 145 aa8.5□□□□□ -1.05
LINC00888-204ENST00000487386 SIX5Q8N196 739 aa8.5□□□□□ -1.05
LINC00888-204ENST00000487386 VRTNQ9H8Y1 702 aa8.5□□□□□ -1.05
LINC00888-204ENST00000487386 NXF1Q9UBU9 619 aaKnown RBP8.5□□□□□ -1.05
LINC00888-204ENST00000487386 SENP3-EIF4A1A0A087X0R7 540 aa8.49□□□□□ -1.05
LINC00888-204ENST00000487386 SLC35F4A4IF30 521 aa8.49□□□□□ -1.05
LINC00888-204ENST00000487386 RASA1P20936 1047 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms