RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 DDX54Q8TDD1 881 aaKnown RBP21.81■■□□□ 1.08
GABPA-203ENST00000487266 POLKQ9UBT6 870 aa21.8■■□□□ 1.08
GABPA-203ENST00000487266 NSD2O96028 1365 aa21.78■■□□□ 1.08
GABPA-203ENST00000487266 LRP5O75197 1615 aa21.78■■□□□ 1.08
GABPA-203ENST00000487266 WASHC2AQ641Q2 1341 aa21.78■■□□□ 1.08
GABPA-203ENST00000487266 PLSCR1O15162 318 aa21.77■■□□□ 1.08
GABPA-203ENST00000487266 NCAPD2Q15021 1401 aa21.76■■□□□ 1.07
GABPA-203ENST00000487266 PKD1L3Q7Z443 1732 aa21.76■■□□□ 1.07
GABPA-203ENST00000487266 PROM2Q8N271 834 aa21.76■■□□□ 1.07
GABPA-203ENST00000487266 ZCRB1Q8TBF4 217 aaKnown RBP21.75■■□□□ 1.07
GABPA-203ENST00000487266 RAPGEF4Q8WZA2 1011 aa21.75■■□□□ 1.07
GABPA-203ENST00000487266 KNSTRNQ9Y448 316 aa21.75■■□□□ 1.07
GABPA-203ENST00000487266 ANO8Q9HCE9 1232 aaPredicted RBP21.74■■□□□ 1.07
GABPA-203ENST00000487266 TATP17735 454 aaPredicted RBP21.73■■□□□ 1.07
GABPA-203ENST00000487266 AMER1Q5JTC6 1135 aaPredicted RBP21.73■■□□□ 1.07
GABPA-203ENST00000487266 MORC1Q86VD1 984 aa21.73■■□□□ 1.07
GABPA-203ENST00000487266 TOGARAM1Q9Y4F4 1720 aa21.72■■□□□ 1.07
GABPA-203ENST00000487266 EIF4A2Q14240 407 aaKnown RBP21.72■■□□□ 1.07
GABPA-203ENST00000487266 TXNRD1Q16881 649 aa21.72■■□□□ 1.07
GABPA-203ENST00000487266 EYA1Q99502 592 aa21.72■■□□□ 1.07
GABPA-203ENST00000487266 PAPPAQ13219 1627 aa21.7■■□□□ 1.06
GABPA-203ENST00000487266 SYTL4Q96C24 671 aaPredicted RBP21.7■■□□□ 1.06
GABPA-203ENST00000487266 NBPF14Q5TI25 921 aa21.69■■□□□ 1.06
GABPA-203ENST00000487266 PER1O15534 1290 aaPredicted RBP21.68■■□□□ 1.06
GABPA-203ENST00000487266 PCDH11XQ9BZA7 1347 aa21.68■■□□□ 1.06
GABPA-203ENST00000487266 PCDH11YQ9BZA8 1340 aa21.68■■□□□ 1.06
GABPA-203ENST00000487266 CASZ1Q86V15 1759 aa21.68■■□□□ 1.06
GABPA-203ENST00000487266 PRIM1P49642 420 aaKnown RBP21.67■■□□□ 1.06
GABPA-203ENST00000487266 CC2D1BQ5T0F9 858 aaKnown RBP21.67■■□□□ 1.06
GABPA-203ENST00000487266 CYP27B1O15528 508 aa21.66■■□□□ 1.06
GABPA-203ENST00000487266 CNGB1Q14028 1251 aaPredicted RBP21.66■■□□□ 1.06
GABPA-203ENST00000487266 ITGB4P16144 1822 aa21.66■■□□□ 1.06
GABPA-203ENST00000487266 LY75O60449 1722 aa21.66■■□□□ 1.06
GABPA-203ENST00000487266 IGSF1Q8N6C5 1336 aa21.64■■□□□ 1.05
GABPA-203ENST00000487266 PDGFDQ9GZP0 370 aaPredicted RBP21.64■■□□□ 1.05
GABPA-203ENST00000487266 KCNQ4P56696 695 aa21.62■■□□□ 1.05
GABPA-203ENST00000487266 LRRC4BQ9NT99 713 aa21.62■■□□□ 1.05
GABPA-203ENST00000487266 AEBP1Q8IUX7 1158 aa21.61■■□□□ 1.05
GABPA-203ENST00000487266 TUBGCP6Q96RT7 1819 aa21.6■■□□□ 1.05
GABPA-203ENST00000487266 ZNF827Q17R98 1081 aa21.59■■□□□ 1.05
GABPA-203ENST00000487266 STK32BQ9NY57 414 aa21.59■■□□□ 1.05
GABPA-203ENST00000487266 SLC15A2Q16348 729 aa21.58■■□□□ 1.05
GABPA-203ENST00000487266 SPG7Q9UQ90 795 aa21.58■■□□□ 1.05
GABPA-203ENST00000487266 MTHFSP49914 203 aa21.57■■□□□ 1.04
GABPA-203ENST00000487266 IL13P35225 146 aa21.56■■□□□ 1.04
GABPA-203ENST00000487266 MPRIPQ6WCQ1 1025 aa21.56■■□□□ 1.04
GABPA-203ENST00000487266 PHKG2P15735 406 aa21.55■■□□□ 1.04
GABPA-203ENST00000487266 NPC1L1Q9UHC9 1359 aa21.55■■□□□ 1.04
GABPA-203ENST00000487266 C5P01031 1676 aa21.54■■□□□ 1.04
GABPA-203ENST00000487266 ZBTB7AO95365 584 aa21.54■■□□□ 1.04
GABPA-203ENST00000487266 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.54■■□□□ 1.04
GABPA-203ENST00000487266 COL3A1P02461 1466 aaPredicted RBP21.53■■□□□ 1.04
GABPA-203ENST00000487266 TAF1LQ8IZX4 1826 aa21.53■■□□□ 1.04
GABPA-203ENST00000487266 NKX1-1Q15270 411 aaPredicted RBP21.53■■□□□ 1.04
GABPA-203ENST00000487266 SULT6B1Q6IMI4 303 aa21.53■■□□□ 1.04
GABPA-203ENST00000487266 QSER1Q2KHR3 1735 aa21.52■■□□□ 1.04
GABPA-203ENST00000487266 KDRP35968 1356 aa21.52■■□□□ 1.04
GABPA-203ENST00000487266 PALLDQ8WX93 1383 aa21.52■■□□□ 1.04
GABPA-203ENST00000487266 SLC27A3Q5K4L6 730 aa21.52■■□□□ 1.04
GABPA-203ENST00000487266 CCNL1Q9UK58 526 aaPredicted RBP21.52■■□□□ 1.04
GABPA-203ENST00000487266 IFNL2Q8IZJ0 200 aa21.51■■□□□ 1.03
GABPA-203ENST00000487266 AKT1S1Q96B36 256 aa21.51■■□□□ 1.03
GABPA-203ENST00000487266 PLEKHG2Q9H7P9 1386 aa21.5■■□□□ 1.03
GABPA-203ENST00000487266 KDM6AO15550 1401 aaPredicted RBP21.5■■□□□ 1.03
GABPA-203ENST00000487266 PIGBQ92521 554 aa21.5■■□□□ 1.03
GABPA-203ENST00000487266 SPON1Q9HCB6 807 aa21.5■■□□□ 1.03
GABPA-203ENST00000487266 ZNF530Q6P9A1 599 aaPredicted RBP21.49■■□□□ 1.03
GABPA-203ENST00000487266 HMOX1P09601 288 aa21.48■■□□□ 1.03
GABPA-203ENST00000487266 ATF5Q9Y2D1 282 aaPredicted RBP21.48■■□□□ 1.03
GABPA-203ENST00000487266 PLEKHO1Q53GL0 409 aaPredicted RBP21.47■■□□□ 1.03
GABPA-203ENST00000487266 TMOD3Q9NYL9 352 aa21.47■■□□□ 1.03
GABPA-203ENST00000487266 VIRMAQ69YN4 1812 aaKnown RBP21.47■■□□□ 1.03
GABPA-203ENST00000487266 PNPLA7Q6ZV29 1317 aa21.47■■□□□ 1.03
GABPA-203ENST00000487266 DIAPH1O60610 1272 aaKnown RBP21.45■■□□□ 1.02
GABPA-203ENST00000487266 PTGER2P43116 358 aa21.45■■□□□ 1.02
GABPA-203ENST00000487266 C4BP0C0L5 1744 aa21.45■■□□□ 1.02
GABPA-203ENST00000487266 SCN11AQ9UI33 1791 aa21.44■■□□□ 1.02
GABPA-203ENST00000487266 TFCP2L1Q9NZI6 479 aa21.44■■□□□ 1.02
GABPA-203ENST00000487266 PPP1R1BQ9UD71 204 aaPredicted RBP21.44■■□□□ 1.02
GABPA-203ENST00000487266 ASAP1Q9ULH1 1129 aa21.44■■□□□ 1.02
GABPA-203ENST00000487266 AMOTQ4VCS5 1084 aa21.43■■□□□ 1.02
GABPA-203ENST00000487266 MTFR1LQ9H019 292 aa21.42■■□□□ 1.02
GABPA-203ENST00000487266 C1orf141Q5JVX7 400 aa21.41■■□□□ 1.02
GABPA-203ENST00000487266 SMARCC1Q92922 1105 aaPredicted RBP21.41■■□□□ 1.02
GABPA-203ENST00000487266 DCAF5Q96JK2 942 aa21.41■■□□□ 1.02
GABPA-203ENST00000487266 ATG3Q9NT62 314 aa21.41■■□□□ 1.02
GABPA-203ENST00000487266 UBR3Q6ZT12 1888 aa21.41■■□□□ 1.02
GABPA-203ENST00000487266 SGIP1Q9BQI5 828 aa21.4■■□□□ 1.02
GABPA-203ENST00000487266 COL24A1Q17RW2 1714 aa21.39■■□□□ 1.01
GABPA-203ENST00000487266 U2SURPO15042 1029 aaKnown RBP21.39■■□□□ 1.01
GABPA-203ENST00000487266 HSP90AB1P08238 724 aaKnown RBP21.39■■□□□ 1.01
GABPA-203ENST00000487266 PPP2R1AP30153 589 aa21.39■■□□□ 1.01
GABPA-203ENST00000487266 AMIGO3Q86WK7 504 aa21.39■■□□□ 1.01
GABPA-203ENST00000487266 LOC102724428A0A0B4J2F2 783 aa21.38■■□□□ 1.01
GABPA-203ENST00000487266 ERVV-2B6SEH9 535 aa21.38■■□□□ 1.01
GABPA-203ENST00000487266 SIK1P57059 783 aa21.38■■□□□ 1.01
GABPA-203ENST00000487266 LINC00116Q8NCU8 138 aa21.38■■□□□ 1.01
GABPA-203ENST00000487266 ITPK1Q13572 414 aa21.37■■□□□ 1.01
GABPA-203ENST00000487266 SMIM5Q71RC9 77 aa21.37■■□□□ 1.01
GABPA-203ENST00000487266 COL5A3P25940 1745 aaPredicted RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms