RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 CNGB1Q14028 1251 aaPredicted RBP30.52■■■□□ 2.48
CDHR3-212ENST00000487084 EIF4A2Q14240 407 aaKnown RBP30.51■■■□□ 2.47
CDHR3-212ENST00000487084 PSDA5PKW4 1024 aaPredicted RBP30.5■■■□□ 2.47
CDHR3-212ENST00000487084 EYA1Q99502 592 aa30.5■■■□□ 2.47
CDHR3-212ENST00000487084 PLSCR1O15162 318 aa30.47■■■□□ 2.47
CDHR3-212ENST00000487084 NHSQ6T4R5 1651 aa30.46■■■□□ 2.47
CDHR3-212ENST00000487084 RREB1Q92766 1687 aa30.46■■■□□ 2.47
CDHR3-212ENST00000487084 R3HDM1Q15032 1099 aaKnown RBP30.45■■■□□ 2.47
CDHR3-212ENST00000487084 NCAPD2Q15021 1401 aa30.45■■■□□ 2.46
CDHR3-212ENST00000487084 SHANK3Q9BYB0 1731 aa30.44■■■□□ 2.46
CDHR3-212ENST00000487084 SYTL4Q96C24 671 aaPredicted RBP30.43■■■□□ 2.46
CDHR3-212ENST00000487084 PCDH11XQ9BZA7 1347 aa30.43■■■□□ 2.46
CDHR3-212ENST00000487084 PCDH11YQ9BZA8 1340 aa30.43■■■□□ 2.46
CDHR3-212ENST00000487084 NUP188Q5SRE5 1749 aa30.42■■■□□ 2.46
CDHR3-212ENST00000487084 NBPF14Q5TI25 921 aa30.42■■■□□ 2.46
CDHR3-212ENST00000487084 KAT6BQ8WYB5 2073 aa30.42■■■□□ 2.46
CDHR3-212ENST00000487084 RGPD3A6NKT7 1758 aaPredicted RBP30.41■■■□□ 2.46
CDHR3-212ENST00000487084 RGPD4Q7Z3J3 1758 aa30.41■■■□□ 2.46
CDHR3-212ENST00000487084 NPC1L1Q9UHC9 1359 aa30.39■■■□□ 2.45
CDHR3-212ENST00000487084 PRIM1P49642 420 aaKnown RBP30.38■■■□□ 2.45
CDHR3-212ENST00000487084 IGSF1Q8N6C5 1336 aa30.38■■■□□ 2.45
CDHR3-212ENST00000487084 DOT1LQ8TEK3 1739 aa30.37■■■□□ 2.45
CDHR3-212ENST00000487084 MTHFSP49914 203 aa30.37■■■□□ 2.45
CDHR3-212ENST00000487084 TXNRD1Q16881 649 aa30.37■■■□□ 2.45
CDHR3-212ENST00000487084 SPG7Q9UQ90 795 aa30.37■■■□□ 2.45
CDHR3-212ENST00000487084 PROM2Q8N271 834 aa30.36■■■□□ 2.45
CDHR3-212ENST00000487084 BTAF1O14981 1849 aa30.36■■■□□ 2.45
CDHR3-212ENST00000487084 CYP27B1O15528 508 aa30.35■■■□□ 2.45
CDHR3-212ENST00000487084 PKD1L3Q7Z443 1732 aa30.33■■■□□ 2.45
CDHR3-212ENST00000487084 IL13P35225 146 aa30.31■■■□□ 2.44
CDHR3-212ENST00000487084 AEBP1Q8IUX7 1158 aa30.3■■■□□ 2.44
CDHR3-212ENST00000487084 ANO8Q9HCE9 1232 aaPredicted RBP30.3■■■□□ 2.44
CDHR3-212ENST00000487084 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.29■■■□□ 2.44
CDHR3-212ENST00000487084 SULT6B1Q6IMI4 303 aa30.28■■■□□ 2.44
CDHR3-212ENST00000487084 IFNL2Q8IZJ0 200 aa30.25■■■□□ 2.43
CDHR3-212ENST00000487084 STK32BQ9NY57 414 aa30.25■■■□□ 2.43
CDHR3-212ENST00000487084 SRCAPQ6ZRS2 3230 aa30.24■■■□□ 2.43
CDHR3-212ENST00000487084 DIAPH1O60610 1272 aaKnown RBP30.24■■■□□ 2.43
CDHR3-212ENST00000487084 PHKG2P15735 406 aa30.24■■■□□ 2.43
CDHR3-212ENST00000487084 PLEKHO1Q53GL0 409 aaPredicted RBP30.24■■■□□ 2.43
CDHR3-212ENST00000487084 MPRIPQ6WCQ1 1025 aa30.24■■■□□ 2.43
CDHR3-212ENST00000487084 NKX1-1Q15270 411 aaPredicted RBP30.22■■■□□ 2.43
CDHR3-212ENST00000487084 PLEKHG2Q9H7P9 1386 aa30.22■■■□□ 2.43
CDHR3-212ENST00000487084 TOGARAM1Q9Y4F4 1720 aa30.2■■■□□ 2.43
CDHR3-212ENST00000487084 AMOTQ4VCS5 1084 aa30.2■■■□□ 2.43
CDHR3-212ENST00000487084 ZNF530Q6P9A1 599 aaPredicted RBP30.2■■■□□ 2.43
CDHR3-212ENST00000487084 LRRC4BQ9NT99 713 aa30.2■■■□□ 2.43
CDHR3-212ENST00000487084 KDRP35968 1356 aa30.19■■■□□ 2.42
CDHR3-212ENST00000487084 HMOX1P09601 288 aa30.19■■■□□ 2.42
CDHR3-212ENST00000487084 SLC27A3Q5K4L6 730 aa30.19■■■□□ 2.42
CDHR3-212ENST00000487084 KCNQ4P56696 695 aa30.18■■■□□ 2.42
CDHR3-212ENST00000487084 SLC15A2Q16348 729 aa30.18■■■□□ 2.42
CDHR3-212ENST00000487084 CCNL1Q9UK58 526 aaPredicted RBP30.17■■■□□ 2.42
CDHR3-212ENST00000487084 LRP5O75197 1615 aa30.16■■■□□ 2.42
CDHR3-212ENST00000487084 U2SURPO15042 1029 aaKnown RBP30.16■■■□□ 2.42
CDHR3-212ENST00000487084 ZEB1P37275 1124 aaPredicted RBP30.16■■■□□ 2.42
CDHR3-212ENST00000487084 CFAP53Q96M91 514 aa30.16■■■□□ 2.42
CDHR3-212ENST00000487084 COL3A1P02461 1466 aaPredicted RBP30.16■■■□□ 2.42
CDHR3-212ENST00000487084 PPP2R1AP30153 589 aa30.15■■■□□ 2.42
CDHR3-212ENST00000487084 C1orf141Q5JVX7 400 aa30.15■■■□□ 2.42
CDHR3-212ENST00000487084 PIGBQ92521 554 aa30.15■■■□□ 2.42
CDHR3-212ENST00000487084 TMOD3Q9NYL9 352 aa30.15■■■□□ 2.42
CDHR3-212ENST00000487084 PALLDQ8WX93 1383 aa30.15■■■□□ 2.42
CDHR3-212ENST00000487084 HSP90AB1P08238 724 aaKnown RBP30.14■■■□□ 2.42
CDHR3-212ENST00000487084 PAPPAQ13219 1627 aa30.14■■■□□ 2.41
CDHR3-212ENST00000487084 ZNF827Q17R98 1081 aa30.12■■■□□ 2.41
CDHR3-212ENST00000487084 ITGB4P16144 1822 aa30.12■■■□□ 2.41
CDHR3-212ENST00000487084 LY75O60449 1722 aa30.11■■■□□ 2.41
CDHR3-212ENST00000487084 DCAF5Q96JK2 942 aa30.11■■■□□ 2.41
CDHR3-212ENST00000487084 PDGFDQ9GZP0 370 aaPredicted RBP30.11■■■□□ 2.41
CDHR3-212ENST00000487084 DDX10Q13206 875 aaKnown RBP30.1■■■□□ 2.41
CDHR3-212ENST00000487084 SMARCC1Q92922 1105 aaPredicted RBP30.1■■■□□ 2.41
CDHR3-212ENST00000487084 KDM6AO15550 1401 aaPredicted RBP30.07■■■□□ 2.4
CDHR3-212ENST00000487084 AKT1S1Q96B36 256 aa30.07■■■□□ 2.4
CDHR3-212ENST00000487084 SPON1Q9HCB6 807 aa30.07■■■□□ 2.4
CDHR3-212ENST00000487084 ZBTB7AO95365 584 aa30.06■■■□□ 2.4
CDHR3-212ENST00000487084 CASZ1Q86V15 1759 aa30.05■■■□□ 2.4
CDHR3-212ENST00000487084 ERVV-2B6SEH9 535 aa30.05■■■□□ 2.4
CDHR3-212ENST00000487084 CABP4P57796 275 aa30.04■■■□□ 2.4
CDHR3-212ENST00000487084 TFCP2L1Q9NZI6 479 aa30.04■■■□□ 2.4
CDHR3-212ENST00000487084 ASAP1Q9ULH1 1129 aa30.04■■■□□ 2.4
CDHR3-212ENST00000487084 NUDCQ9Y266 331 aa30.04■■■□□ 2.4
CDHR3-212ENST00000487084 AKAP4Q5JQC9 854 aa30.03■■■□□ 2.4
CDHR3-212ENST00000487084 MTHFSDQ2M296 383 aaKnown RBP30.01■■■□□ 2.39
CDHR3-212ENST00000487084 ATG3Q9NT62 314 aa30■■■□□ 2.39
CDHR3-212ENST00000487084 PPP1R1BQ9UD71 204 aaPredicted RBP30■■■□□ 2.39
CDHR3-212ENST00000487084 ATF5Q9Y2D1 282 aaPredicted RBP30■■■□□ 2.39
CDHR3-212ENST00000487084 LOC102724428A0A0B4J2F2 783 aa29.99■■■□□ 2.39
CDHR3-212ENST00000487084 U2AF1L5P0DN76 240 aaPredicted RBP29.99■■■□□ 2.39
CDHR3-212ENST00000487084 SIK1P57059 783 aa29.99■■■□□ 2.39
CDHR3-212ENST00000487084 U2AF1Q01081 240 aaKnown RBP eCLIP29.99■■■□□ 2.39
CDHR3-212ENST00000487084 C5P01031 1676 aa29.97■■■□□ 2.39
CDHR3-212ENST00000487084 PNPLA7Q6ZV29 1317 aa29.96■■■□□ 2.39
CDHR3-212ENST00000487084 HMGB2P26583 209 aaKnown RBP29.96■■■□□ 2.39
CDHR3-212ENST00000487084 PRKAR2BP31323 418 aa29.96■■■□□ 2.39
CDHR3-212ENST00000487084 MTFR1LQ9H019 292 aa29.96■■■□□ 2.39
CDHR3-212ENST00000487084 NFATC2IPQ8NCF5 419 aa29.95■■■□□ 2.39
CDHR3-212ENST00000487084 RBM42Q9BTD8 480 aaKnown RBP29.95■■■□□ 2.39
CDHR3-212ENST00000487084 ATP6V1AP38606 617 aa29.94■■■□□ 2.38
CDHR3-212ENST00000487084 RSPH6AQ9H0K4 717 aa29.94■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms