RNA–Protein interactions for RNA: ENST00000486889.1

CTPS1-210, Transcript of CTP synthase 1, humanhuman

TSL 2

Gene CTPS1, Length 568 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-210ENST00000486889 LMOD3Q0VAK6 560 aa12.86□□□□□ -0.35
CTPS1-210ENST00000486889 C1orf141Q5JVX7 400 aa12.86□□□□□ -0.35
CTPS1-210ENST00000486889 RUNDC1Q96C34 613 aa12.86□□□□□ -0.35
CTPS1-210ENST00000486889 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.86□□□□□ -0.35
CTPS1-210ENST00000486889 RGPD5Q99666 1765 aa12.86□□□□□ -0.35
CTPS1-210ENST00000486889 COL3A1P02461 1466 aaPredicted RBP12.85□□□□□ -0.35
CTPS1-210ENST00000486889 HSP90AB1P08238 724 aaKnown RBP12.85□□□□□ -0.35
CTPS1-210ENST00000486889 ADAMTS8Q9UP79 889 aa12.85□□□□□ -0.35
CTPS1-210ENST00000486889 PRKAR2BP31323 418 aa12.84□□□□□ -0.35
CTPS1-210ENST00000486889 PDE3BQ13370 1112 aa12.84□□□□□ -0.35
CTPS1-210ENST00000486889 DDB1Q16531 1140 aa12.84□□□□□ -0.35
CTPS1-210ENST00000486889 RTF1Q92541 710 aaKnown RBP12.84□□□□□ -0.35
CTPS1-210ENST00000486889 KDRP35968 1356 aa12.83□□□□□ -0.36
CTPS1-210ENST00000486889 NRAPQ86VF7 1730 aa12.83□□□□□ -0.36
CTPS1-210ENST00000486889 ATRNO75882 1429 aa12.83□□□□□ -0.36
CTPS1-210ENST00000486889 NCBP3Q53F19 620 aaKnown RBP12.83□□□□□ -0.36
CTPS1-210ENST00000486889 USHBP1Q8N6Y0 703 aa12.83□□□□□ -0.36
CTPS1-210ENST00000486889 ZCRB1Q8TBF4 217 aaKnown RBP12.83□□□□□ -0.36
CTPS1-210ENST00000486889 PCDH11XQ9BZA7 1347 aa12.83□□□□□ -0.36
CTPS1-210ENST00000486889 PCDH11YQ9BZA8 1340 aa12.83□□□□□ -0.36
CTPS1-210ENST00000486889 CALD1Q05682 793 aaKnown RBP12.82□□□□□ -0.36
CTPS1-210ENST00000486889 FAM98CQ17RN3 349 aaKnown RBP12.82□□□□□ -0.36
CTPS1-210ENST00000486889 RSPH6AQ9H0K4 717 aa12.82□□□□□ -0.36
CTPS1-210ENST00000486889 IFNL2Q8IZJ0 200 aa12.81□□□□□ -0.36
CTPS1-210ENST00000486889 PARP4Q9UKK3 1724 aaKnown RBP12.81□□□□□ -0.36
CTPS1-210ENST00000486889 HTATSF1O43719 755 aaKnown RBP12.8□□□□□ -0.36
CTPS1-210ENST00000486889 CCDC184Q52MB2 194 aa12.8□□□□□ -0.36
CTPS1-210ENST00000486889 NCAPD2Q15021 1401 aa12.79□□□□□ -0.36
CTPS1-210ENST00000486889 GNAT3A8MTJ3 354 aa12.79□□□□□ -0.36
CTPS1-210ENST00000486889 AKAP4Q5JQC9 854 aa12.79□□□□□ -0.36
CTPS1-210ENST00000486889 ZNF530Q6P9A1 599 aaPredicted RBP12.79□□□□□ -0.36
CTPS1-210ENST00000486889 AEBP1Q8IUX7 1158 aa12.79□□□□□ -0.36
CTPS1-210ENST00000486889 RGPD1P0DJD0 1748 aa12.79□□□□□ -0.36
CTPS1-210ENST00000486889 OVOS2A0A0G2JMS6 1433 aa12.79□□□□□ -0.36
CTPS1-210ENST00000486889 ONECUT3O60422 494 aaPredicted RBP12.78□□□□□ -0.36
CTPS1-210ENST00000486889 SF3B2Q13435 895 aaKnown RBP12.78□□□□□ -0.36
CTPS1-210ENST00000486889 NFE2L2Q16236 605 aa12.78□□□□□ -0.36
CTPS1-210ENST00000486889 CCDC146Q8IYE0 955 aa12.78□□□□□ -0.36
CTPS1-210ENST00000486889 DDX54Q8TDD1 881 aaKnown RBP12.78□□□□□ -0.36
CTPS1-210ENST00000486889 HMGB2P26583 209 aaKnown RBP12.77□□□□□ -0.37
CTPS1-210ENST00000486889 RIPK4P57078 832 aa12.77□□□□□ -0.37
CTPS1-210ENST00000486889 SEPT12Q8IYM1 358 aa12.77□□□□□ -0.37
CTPS1-210ENST00000486889 NEUROD2Q15784 382 aa12.76□□□□□ -0.37
CTPS1-210ENST00000486889 CCDC125Q86Z20 511 aa12.76□□□□□ -0.37
CTPS1-210ENST00000486889 DCAF5Q96JK2 942 aa12.76□□□□□ -0.37
CTPS1-210ENST00000486889 PLEKHF1Q96S99 279 aa12.76□□□□□ -0.37
CTPS1-210ENST00000486889 RGPD2P0DJD1 1756 aa12.76□□□□□ -0.37
CTPS1-210ENST00000486889 APAF1O14727 1248 aa12.75□□□□□ -0.37
CTPS1-210ENST00000486889 TMPOP42166 694 aaKnown RBP12.75□□□□□ -0.37
CTPS1-210ENST00000486889 TEFQ10587 303 aa12.75□□□□□ -0.37
CTPS1-210ENST00000486889 MTHFSDQ2M296 383 aaKnown RBP12.75□□□□□ -0.37
CTPS1-210ENST00000486889 TNS2Q63HR2 1409 aa12.75□□□□□ -0.37
CTPS1-210ENST00000486889 KRT27Q7Z3Y8 459 aa12.75□□□□□ -0.37
CTPS1-210ENST00000486889 MAP3K5Q99683 1374 aa12.75□□□□□ -0.37
CTPS1-210ENST00000486889 DISP2A7MBM2 1401 aa12.74□□□□□ -0.37
CTPS1-210ENST00000486889 HNRNPUQ00839 825 aaKnown RBP eCLIP12.74□□□□□ -0.37
CTPS1-210ENST00000486889 MEGF6O75095 1541 aa12.73□□□□□ -0.37
CTPS1-210ENST00000486889 PHKG2P15735 406 aa12.73□□□□□ -0.37
CTPS1-210ENST00000486889 CCDC27Q2M243 656 aa12.73□□□□□ -0.37
CTPS1-210ENST00000486889 FAM196AQ6ZSG2 479 aa12.73□□□□□ -0.37
CTPS1-210ENST00000486889 PHACTR3Q96KR7 559 aa12.73□□□□□ -0.37
CTPS1-210ENST00000486889 GLI3P10071 1580 aa12.73□□□□□ -0.37
CTPS1-210ENST00000486889 WNK3Q9BYP7 1800 aa12.72□□□□□ -0.37
CTPS1-210ENST00000486889 ERVV-2B6SEH9 535 aa12.72□□□□□ -0.37
CTPS1-210ENST00000486889 CHMP4AQ9BY43 222 aa12.72□□□□□ -0.37
CTPS1-210ENST00000486889 NPM3O75607 178 aaKnown RBP12.71□□□□□ -0.37
CTPS1-210ENST00000486889 CABP4P57796 275 aa12.71□□□□□ -0.37
CTPS1-210ENST00000486889 PKD1L3Q7Z443 1732 aa12.71□□□□□ -0.38
CTPS1-210ENST00000486889 NKX1-1Q15270 411 aaPredicted RBP12.7□□□□□ -0.38
CTPS1-210ENST00000486889 WDR63Q8IWG1 891 aa12.7□□□□□ -0.38
CTPS1-210ENST00000486889 TMOD3Q9NYL9 352 aa12.7□□□□□ -0.38
CTPS1-210ENST00000486889 THSD7AQ9UPZ6 1657 aa12.7□□□□□ -0.38
CTPS1-210ENST00000486889 GNAI1P63096 354 aa12.69□□□□□ -0.38
CTPS1-210ENST00000486889 MPRIPQ6WCQ1 1025 aa12.69□□□□□ -0.38
CTPS1-210ENST00000486889 TTC5Q8N0Z6 440 aa12.69□□□□□ -0.38
CTPS1-210ENST00000486889 SYTL4Q96C24 671 aaPredicted RBP12.69□□□□□ -0.38
CTPS1-210ENST00000486889 MYH16Q9H6N6 1097 aa12.69□□□□□ -0.38
CTPS1-210ENST00000486889 BABAM1Q9NWV8 329 aa12.69□□□□□ -0.38
CTPS1-210ENST00000486889 RRP7AQ9Y3A4 280 aaKnown RBP12.69□□□□□ -0.38
CTPS1-210ENST00000486889 SALL2Q9Y467 1007 aaPredicted RBP12.69□□□□□ -0.38
CTPS1-210ENST00000486889 LRRC37A3O60309 1634 aa12.69□□□□□ -0.38
CTPS1-210ENST00000486889 CYP27B1O15528 508 aa12.68□□□□□ -0.38
CTPS1-210ENST00000486889 RNMTO43148 476 aaKnown RBP12.68□□□□□ -0.38
CTPS1-210ENST00000486889 BRWD3Q6RI45 1802 aa12.67□□□□□ -0.38
CTPS1-210ENST00000486889 IL16Q14005 1332 aa12.67□□□□□ -0.38
CTPS1-210ENST00000486889 GOLGA2Q08379 1002 aa12.67□□□□□ -0.38
CTPS1-210ENST00000486889 TAF7Q15545 349 aaPredicted RBP12.67□□□□□ -0.38
CTPS1-210ENST00000486889 DEFB132Q7Z7B7 95 aa12.67□□□□□ -0.38
CTPS1-210ENST00000486889 WWC1Q8IX03 1113 aa12.67□□□□□ -0.38
CTPS1-210ENST00000486889 MARCH10Q8NA82 808 aaPredicted RBP12.67□□□□□ -0.38
CTPS1-210ENST00000486889 SMARCC1Q92922 1105 aaPredicted RBP12.67□□□□□ -0.38
CTPS1-210ENST00000486889 YTHDC1Q96MU7 727 aaKnown RBP12.67□□□□□ -0.38
CTPS1-210ENST00000486889 ZBED9Q6R2W3 1325 aa12.66□□□□□ -0.38
CTPS1-210ENST00000486889 BCL9O00512 1426 aa12.66□□□□□ -0.38
CTPS1-210ENST00000486889 BTBD11A6QL63 1104 aa12.66□□□□□ -0.38
CTPS1-210ENST00000486889 BAG6P46379 1132 aa12.66□□□□□ -0.38
CTPS1-210ENST00000486889 FAM182BQ5T319 152 aa12.66□□□□□ -0.38
CTPS1-210ENST00000486889 MCM10Q7L590 875 aa12.66□□□□□ -0.38
CTPS1-210ENST00000486889 SLC52A2Q9HAB3 445 aa12.66□□□□□ -0.38
CTPS1-210ENST00000486889 LAS1LQ9Y4W2 734 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms