RNA–Protein interactions for RNA: ENST00000486793.5

GMDS-205, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-205ENST00000486793 USP47Q96K76 1375 aa26.23■■□□□ 1.79
GMDS-205ENST00000486793 PAPPAQ13219 1627 aa26.23■■□□□ 1.79
GMDS-205ENST00000486793 PNPLA7Q6ZV29 1317 aa26.22■■□□□ 1.79
GMDS-205ENST00000486793 BTAF1O14981 1849 aa26.22■■□□□ 1.79
GMDS-205ENST00000486793 RTL1A6NKG5 1358 aa26.21■■□□□ 1.79
GMDS-205ENST00000486793 MEGF6O75095 1541 aa26.21■■□□□ 1.79
GMDS-205ENST00000486793 HSP90AB2PQ58FF8 381 aa26.21■■□□□ 1.79
GMDS-205ENST00000486793 RAPGEF4Q8WZA2 1011 aa26.21■■□□□ 1.79
GMDS-205ENST00000486793 NSD2O96028 1365 aa26.2■■□□□ 1.79
GMDS-205ENST00000486793 TRIM26Q12899 539 aaPredicted RBP26.2■■□□□ 1.78
GMDS-205ENST00000486793 CGNL1Q0VF96 1302 aa26.19■■□□□ 1.78
GMDS-205ENST00000486793 CDCA8Q53HL2 280 aa26.19■■□□□ 1.78
GMDS-205ENST00000486793 CCNL1Q9UK58 526 aaPredicted RBP26.19■■□□□ 1.78
GMDS-205ENST00000486793 MAP3K5Q99683 1374 aa26.19■■□□□ 1.78
GMDS-205ENST00000486793 POLD1P28340 1107 aa26.18■■□□□ 1.78
GMDS-205ENST00000486793 ZNF784Q8NCA9 323 aaPredicted RBP26.18■■□□□ 1.78
GMDS-205ENST00000486793 TATP17735 454 aaPredicted RBP26.17■■□□□ 1.78
GMDS-205ENST00000486793 CARD14Q9BXL6 1004 aa26.17■■□□□ 1.78
GMDS-205ENST00000486793 KLHL34Q8N239 644 aa26.16■■□□□ 1.78
GMDS-205ENST00000486793 KAT6BQ8WYB5 2073 aa26.15■■□□□ 1.78
GMDS-205ENST00000486793 INSRP06213 1382 aa26.15■■□□□ 1.78
GMDS-205ENST00000486793 SMG6Q86US8 1419 aaKnown RBP26.14■■□□□ 1.78
GMDS-205ENST00000486793 GPR162Q16538 588 aa26.14■■□□□ 1.78
GMDS-205ENST00000486793 FAM208AQ9UK61 1670 aaKnown RBP26.14■■□□□ 1.78
GMDS-205ENST00000486793 FLT4P35916 1363 aa26.11■■□□□ 1.77
GMDS-205ENST00000486793 MSH5O43196 834 aa26.11■■□□□ 1.77
GMDS-205ENST00000486793 COL23A1Q86Y22 540 aaPredicted RBP26.11■■□□□ 1.77
GMDS-205ENST00000486793 EMILIN1Q9Y6C2 1016 aa26.11■■□□□ 1.77
GMDS-205ENST00000486793 KIF24Q5T7B8 1368 aa26.09■■□□□ 1.77
GMDS-205ENST00000486793 CYP27B1O15528 508 aa26.09■■□□□ 1.77
GMDS-205ENST00000486793 MPRIPQ6WCQ1 1025 aa26.09■■□□□ 1.77
GMDS-205ENST00000486793 PCDH11XQ9BZA7 1347 aa26.09■■□□□ 1.77
GMDS-205ENST00000486793 PCDH11YQ9BZA8 1340 aa26.09■■□□□ 1.77
GMDS-205ENST00000486793 PPM1GO15355 546 aaPredicted RBP26.07■■□□□ 1.76
GMDS-205ENST00000486793 NLGN2Q8NFZ4 835 aa26.07■■□□□ 1.76
GMDS-205ENST00000486793 PELP1Q8IZL8 1130 aaKnown RBP26.06■■□□□ 1.76
GMDS-205ENST00000486793 RGPD2P0DJD1 1756 aa26.05■■□□□ 1.76
GMDS-205ENST00000486793 NSD3Q9BZ95 1437 aa26.05■■□□□ 1.76
GMDS-205ENST00000486793 TIMELESSQ9UNS1 1208 aa26.04■■□□□ 1.76
GMDS-205ENST00000486793 DOT1LQ8TEK3 1739 aa26.04■■□□□ 1.76
GMDS-205ENST00000486793 MSL1Q68DK7 614 aa26.02■■□□□ 1.76
GMDS-205ENST00000486793 PALLDQ8WX93 1383 aa26.02■■□□□ 1.76
GMDS-205ENST00000486793 GOLGB1Q14789 3259 aaKnown RBP26.02■■□□□ 1.76
GMDS-205ENST00000486793 SHANK3Q9BYB0 1731 aa26.02■■□□□ 1.76
GMDS-205ENST00000486793 WASHC2AQ641Q2 1341 aa26■■□□□ 1.75
GMDS-205ENST00000486793 HMGB2P26583 209 aaKnown RBP26■■□□□ 1.75
GMDS-205ENST00000486793 PIGBQ92521 554 aa26■■□□□ 1.75
GMDS-205ENST00000486793 NKX1-1Q15270 411 aaPredicted RBP25.99■■□□□ 1.75
GMDS-205ENST00000486793 FLAD1Q8NFF5 587 aa25.99■■□□□ 1.75
GMDS-205ENST00000486793 SMARCC1Q92922 1105 aaPredicted RBP25.99■■□□□ 1.75
GMDS-205ENST00000486793 EYA1Q99502 592 aa25.99■■□□□ 1.75
GMDS-205ENST00000486793 LY75O60449 1722 aa25.99■■□□□ 1.75
GMDS-205ENST00000486793 SPG7Q9UQ90 795 aa25.98■■□□□ 1.75
GMDS-205ENST00000486793 POLKQ9UBT6 870 aa25.97■■□□□ 1.75
GMDS-205ENST00000486793 POLR3GLQ9BT43 218 aa25.96■■□□□ 1.75
GMDS-205ENST00000486793 QSER1Q2KHR3 1735 aa25.96■■□□□ 1.75
GMDS-205ENST00000486793 YBX3P16989 372 aaKnown RBP eCLIP25.95■■□□□ 1.74
GMDS-205ENST00000486793 SMIM5Q71RC9 77 aa25.94■■□□□ 1.74
GMDS-205ENST00000486793 AMIGO3Q86WK7 504 aa25.94■■□□□ 1.74
GMDS-205ENST00000486793 GRIN3BO60391 1043 aa25.93■■□□□ 1.74
GMDS-205ENST00000486793 C1QTNF8P60827 252 aa25.93■■□□□ 1.74
GMDS-205ENST00000486793 AK7Q96M32 723 aa25.93■■□□□ 1.74
GMDS-205ENST00000486793 PCGF6Q9BYE7 350 aa25.93■■□□□ 1.74
GMDS-205ENST00000486793 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.93■■□□□ 1.74
GMDS-205ENST00000486793 NCAPD2Q15021 1401 aa25.93■■□□□ 1.74
GMDS-205ENST00000486793 TNNT2P45379 298 aaPredicted RBP25.92■■□□□ 1.74
GMDS-205ENST00000486793 CD2APQ9Y5K6 639 aa25.92■■□□□ 1.74
GMDS-205ENST00000486793 COL24A1Q17RW2 1714 aa25.91■■□□□ 1.74
GMDS-205ENST00000486793 PHF14O94880 888 aa25.9■■□□□ 1.74
GMDS-205ENST00000486793 TUBGCP6Q96RT7 1819 aa25.9■■□□□ 1.74
GMDS-205ENST00000486793 LOC102724428A0A0B4J2F2 783 aa25.89■■□□□ 1.74
GMDS-205ENST00000486793 PHKG2P15735 406 aa25.89■■□□□ 1.74
GMDS-205ENST00000486793 SIK1P57059 783 aa25.89■■□□□ 1.74
GMDS-205ENST00000486793 EIF4A2Q14240 407 aaKnown RBP25.89■■□□□ 1.74
GMDS-205ENST00000486793 IFNL2Q8IZJ0 200 aa25.89■■□□□ 1.74
GMDS-205ENST00000486793 TMOD3Q9NYL9 352 aa25.89■■□□□ 1.74
GMDS-205ENST00000486793 ASAP1Q9ULH1 1129 aa25.89■■□□□ 1.74
GMDS-205ENST00000486793 KIF20BQ96Q89 1820 aa25.88■■□□□ 1.73
GMDS-205ENST00000486793 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.88■■□□□ 1.73
GMDS-205ENST00000486793 LINC00116Q8NCU8 138 aa25.88■■□□□ 1.73
GMDS-205ENST00000486793 CLSPNQ9HAW4 1339 aa25.87■■□□□ 1.73
GMDS-205ENST00000486793 SENP3-EIF4A1A0A087X0R7 540 aa25.86■■□□□ 1.73
GMDS-205ENST00000486793 ITPK1Q13572 414 aa25.85■■□□□ 1.73
GMDS-205ENST00000486793 SSFA2P28290 1259 aa25.84■■□□□ 1.73
GMDS-205ENST00000486793 ATP6V1AP38606 617 aa25.84■■□□□ 1.73
GMDS-205ENST00000486793 ATG3Q9NT62 314 aa25.84■■□□□ 1.73
GMDS-205ENST00000486793 GIGYF1O75420 1035 aaPredicted RBP25.83■■□□□ 1.73
GMDS-205ENST00000486793 PANK3Q9H999 370 aa25.83■■□□□ 1.73
GMDS-205ENST00000486793 CHD4Q14839 1912 aa25.82■■□□□ 1.72
GMDS-205ENST00000486793 EIF4G2P78344 907 aaKnown RBP eCLIP25.82■■□□□ 1.72
GMDS-205ENST00000486793 C5P01031 1676 aa25.82■■□□□ 1.72
GMDS-205ENST00000486793 TOGARAM1Q9Y4F4 1720 aa25.81■■□□□ 1.72
GMDS-205ENST00000486793 HSPA5P11021 654 aaKnown RBP25.81■■□□□ 1.72
GMDS-205ENST00000486793 GNPATO15228 680 aa25.8■■□□□ 1.72
GMDS-205ENST00000486793 PKD1L3Q7Z443 1732 aa25.8■■□□□ 1.72
GMDS-205ENST00000486793 C4BP0C0L5 1744 aa25.78■■□□□ 1.72
GMDS-205ENST00000486793 IGSF1Q8N6C5 1336 aa25.77■■□□□ 1.72
GMDS-205ENST00000486793 ERVV-2B6SEH9 535 aa25.76■■□□□ 1.71
GMDS-205ENST00000486793 PLEKHO1Q53GL0 409 aaPredicted RBP25.76■■□□□ 1.71
GMDS-205ENST00000486793 WWC3Q9ULE0 1092 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms