RNA–Protein interactions for RNA: ENST00000486308.1

APH1A-207, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1A, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-207ENST00000486308 TATP17735 454 aaPredicted RBP10.06□□□□□ -0.8
APH1A-207ENST00000486308 ZCRB1Q8TBF4 217 aaKnown RBP10.06□□□□□ -0.8
APH1A-207ENST00000486308 PKD1L3Q7Z443 1732 aa10.05□□□□□ -0.8
APH1A-207ENST00000486308 KDRP35968 1356 aa10.05□□□□□ -0.8
APH1A-207ENST00000486308 PLEKHG2Q9H7P9 1386 aa10.05□□□□□ -0.8
APH1A-207ENST00000486308 AEBP1Q8IUX7 1158 aa10.05□□□□□ -0.8
APH1A-207ENST00000486308 DIAPH1O60610 1272 aaKnown RBP10.04□□□□□ -0.8
APH1A-207ENST00000486308 ADRA2BP18089 450 aa10.04□□□□□ -0.8
APH1A-207ENST00000486308 SF3B2Q13435 895 aaKnown RBP10.04□□□□□ -0.8
APH1A-207ENST00000486308 DEFB132Q7Z7B7 95 aa10.04□□□□□ -0.8
APH1A-207ENST00000486308 DDX54Q8TDD1 881 aaKnown RBP10.04□□□□□ -0.8
APH1A-207ENST00000486308 SBF2Q86WG5 1849 aa10.04□□□□□ -0.8
APH1A-207ENST00000486308 PCDH11XQ9BZA7 1347 aa10.04□□□□□ -0.8
APH1A-207ENST00000486308 PCDH11YQ9BZA8 1340 aa10.04□□□□□ -0.8
APH1A-207ENST00000486308 CYP27B1O15528 508 aa10.03□□□□□ -0.8
APH1A-207ENST00000486308 SULT6B1Q6IMI4 303 aa10.03□□□□□ -0.8
APH1A-207ENST00000486308 PTF1AQ7RTS3 328 aa10.03□□□□□ -0.8
APH1A-207ENST00000486308 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.03□□□□□ -0.8
APH1A-207ENST00000486308 NHSQ6T4R5 1651 aa10.02□□□□□ -0.8
APH1A-207ENST00000486308 KCNQ2O43526 872 aa10.02□□□□□ -0.81
APH1A-207ENST00000486308 BAG6P46379 1132 aa10.02□□□□□ -0.81
APH1A-207ENST00000486308 RALBP1Q15311 655 aa10.02□□□□□ -0.81
APH1A-207ENST00000486308 ACSBG1Q96GR2 724 aa10.02□□□□□ -0.81
APH1A-207ENST00000486308 BCL11BQ9C0K0 894 aaPredicted RBP10.02□□□□□ -0.81
APH1A-207ENST00000486308 SPG7Q9UQ90 795 aa10.02□□□□□ -0.81
APH1A-207ENST00000486308 APBA3O96018 575 aa10.01□□□□□ -0.81
APH1A-207ENST00000486308 EN1Q05925 392 aaPredicted RBP10.01□□□□□ -0.81
APH1A-207ENST00000486308 CFAP53Q96M91 514 aa10.01□□□□□ -0.81
APH1A-207ENST00000486308 DOT1LQ8TEK3 1739 aa10.01□□□□□ -0.81
APH1A-207ENST00000486308 U2SURPO15042 1029 aaKnown RBP10□□□□□ -0.81
APH1A-207ENST00000486308 HMOX1P09601 288 aa10□□□□□ -0.81
APH1A-207ENST00000486308 CAMKK2Q96RR4 588 aa10□□□□□ -0.81
APH1A-207ENST00000486308 TOGARAM1Q9Y4F4 1720 aa9.99□□□□□ -0.81
APH1A-207ENST00000486308 PHKG2P15735 406 aa9.99□□□□□ -0.81
APH1A-207ENST00000486308 NKX1-1Q15270 411 aaPredicted RBP9.99□□□□□ -0.81
APH1A-207ENST00000486308 EZH2Q15910 746 aaKnown RBP9.99□□□□□ -0.81
APH1A-207ENST00000486308 AMOTQ4VCS5 1084 aa9.99□□□□□ -0.81
APH1A-207ENST00000486308 PLEKHO1Q53GL0 409 aaPredicted RBP9.99□□□□□ -0.81
APH1A-207ENST00000486308 PRKRIP1Q9H875 184 aaPredicted RBP9.99□□□□□ -0.81
APH1A-207ENST00000486308 MYBBP1AQ9BQG0 1328 aaKnown RBP9.99□□□□□ -0.81
APH1A-207ENST00000486308 RGPD3A6NKT7 1758 aaPredicted RBP9.98□□□□□ -0.81
APH1A-207ENST00000486308 RGPD4Q7Z3J3 1758 aa9.98□□□□□ -0.81
APH1A-207ENST00000486308 PLSCR1O15162 318 aa9.98□□□□□ -0.81
APH1A-207ENST00000486308 PRIM1P49642 420 aaKnown RBP9.98□□□□□ -0.81
APH1A-207ENST00000486308 IFNL2Q8IZJ0 200 aa9.98□□□□□ -0.81
APH1A-207ENST00000486308 RREB1Q92766 1687 aa9.98□□□□□ -0.81
APH1A-207ENST00000486308 BTAF1O14981 1849 aa9.98□□□□□ -0.81
APH1A-207ENST00000486308 ZNF530Q6P9A1 599 aaPredicted RBP9.97□□□□□ -0.81
APH1A-207ENST00000486308 SYTL4Q96C24 671 aaPredicted RBP9.97□□□□□ -0.81
APH1A-207ENST00000486308 RSPH6AQ9H0K4 717 aa9.97□□□□□ -0.81
APH1A-207ENST00000486308 NUDCQ9Y266 331 aa9.97□□□□□ -0.81
APH1A-207ENST00000486308 KDM6AO15550 1401 aaPredicted RBP9.97□□□□□ -0.81
APH1A-207ENST00000486308 U2AF1L5P0DN76 240 aaPredicted RBP9.96□□□□□ -0.82
APH1A-207ENST00000486308 U2AF1Q01081 240 aaKnown RBP eCLIP9.96□□□□□ -0.82
APH1A-207ENST00000486308 PROM2Q8N271 834 aa9.96□□□□□ -0.82
APH1A-207ENST00000486308 NUP188Q5SRE5 1749 aa9.96□□□□□ -0.82
APH1A-207ENST00000486308 PRKAR2BP31323 418 aa9.95□□□□□ -0.82
APH1A-207ENST00000486308 MTHFSDQ2M296 383 aaKnown RBP9.95□□□□□ -0.82
APH1A-207ENST00000486308 C1orf141Q5JVX7 400 aa9.95□□□□□ -0.82
APH1A-207ENST00000486308 DCAF5Q96JK2 942 aa9.95□□□□□ -0.82
APH1A-207ENST00000486308 KAT6BQ8WYB5 2073 aa9.94□□□□□ -0.82
APH1A-207ENST00000486308 FCHSD2O94868 740 aa9.94□□□□□ -0.82
APH1A-207ENST00000486308 HSP90AB1P08238 724 aaKnown RBP9.94□□□□□ -0.82
APH1A-207ENST00000486308 TXNRD1Q16881 649 aa9.94□□□□□ -0.82
APH1A-207ENST00000486308 AKAP4Q5JQC9 854 aa9.94□□□□□ -0.82
APH1A-207ENST00000486308 MPRIPQ6WCQ1 1025 aa9.94□□□□□ -0.82
APH1A-207ENST00000486308 PIGBQ92521 554 aa9.94□□□□□ -0.82
APH1A-207ENST00000486308 PHACTR3Q96KR7 559 aa9.94□□□□□ -0.82
APH1A-207ENST00000486308 ITGB4P16144 1822 aa9.93□□□□□ -0.82
APH1A-207ENST00000486308 ERVV-2B6SEH9 535 aa9.93□□□□□ -0.82
APH1A-207ENST00000486308 ADAMTS7Q9UKP4 1686 aa9.93□□□□□ -0.82
APH1A-207ENST00000486308 PAPPAQ13219 1627 aa9.93□□□□□ -0.82
APH1A-207ENST00000486308 MRC1P22897 1456 aa9.92□□□□□ -0.82
APH1A-207ENST00000486308 GAS2L2Q8NHY3 880 aa9.92□□□□□ -0.82
APH1A-207ENST00000486308 LRRC4BQ9NT99 713 aa9.92□□□□□ -0.82
APH1A-207ENST00000486308 TMOD3Q9NYL9 352 aa9.92□□□□□ -0.82
APH1A-207ENST00000486308 PALLDQ8WX93 1383 aa9.91□□□□□ -0.82
APH1A-207ENST00000486308 MAP3K5Q99683 1374 aa9.91□□□□□ -0.82
APH1A-207ENST00000486308 LY75O60449 1722 aa9.91□□□□□ -0.82
APH1A-207ENST00000486308 PLEKHF1Q96S99 279 aa9.91□□□□□ -0.82
APH1A-207ENST00000486308 LGR6Q9HBX8 967 aa9.91□□□□□ -0.82
APH1A-207ENST00000486308 ANO8Q9HCE9 1232 aaPredicted RBP9.91□□□□□ -0.82
APH1A-207ENST00000486308 SCN11AQ9UI33 1791 aa9.91□□□□□ -0.82
APH1A-207ENST00000486308 GNAT3A8MTJ3 354 aa9.9□□□□□ -0.82
APH1A-207ENST00000486308 RNMTO43148 476 aaKnown RBP9.9□□□□□ -0.82
APH1A-207ENST00000486308 ANP32CO43423 234 aa9.9□□□□□ -0.82
APH1A-207ENST00000486308 CABP4P57796 275 aa9.9□□□□□ -0.82
APH1A-207ENST00000486308 SLC27A3Q5K4L6 730 aa9.9□□□□□ -0.82
APH1A-207ENST00000486308 ASAP1Q9ULH1 1129 aa9.9□□□□□ -0.82
APH1A-207ENST00000486308 PSDA5PKW4 1024 aaPredicted RBP9.89□□□□□ -0.83
APH1A-207ENST00000486308 KCNQ4P56696 695 aa9.89□□□□□ -0.83
APH1A-207ENST00000486308 R3HDM1Q15032 1099 aaKnown RBP9.89□□□□□ -0.83
APH1A-207ENST00000486308 CCDC184Q52MB2 194 aa9.89□□□□□ -0.83
APH1A-207ENST00000486308 NBPF14Q5TI25 921 aa9.89□□□□□ -0.83
APH1A-207ENST00000486308 NFATC2IPQ8NCF5 419 aa9.89□□□□□ -0.83
APH1A-207ENST00000486308 SMARCC1Q92922 1105 aaPredicted RBP9.89□□□□□ -0.83
APH1A-207ENST00000486308 SLC52A2Q9HAB3 445 aa9.89□□□□□ -0.83
APH1A-207ENST00000486308 ATG3Q9NT62 314 aa9.89□□□□□ -0.83
APH1A-207ENST00000486308 CCNL1Q9UK58 526 aaPredicted RBP9.89□□□□□ -0.83
APH1A-207ENST00000486308 CEMIPQ8WUJ3 1361 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms