RNA–Protein interactions for RNA: ENST00000485934.1

HDHD3-203, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

TSL 2

Gene HDHD3, Length 913 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-203ENST00000485934 PCDH11XQ9BZA7 1347 aa20.62■□□□□ 0.89
HDHD3-203ENST00000485934 PCDH11YQ9BZA8 1340 aa20.62■□□□□ 0.89
HDHD3-203ENST00000485934 SULT6B1Q6IMI4 303 aa20.62■□□□□ 0.89
HDHD3-203ENST00000485934 PLEKHO1Q53GL0 409 aaPredicted RBP20.61■□□□□ 0.89
HDHD3-203ENST00000485934 MYBBP1AQ9BQG0 1328 aaKnown RBP20.6■□□□□ 0.89
HDHD3-203ENST00000485934 U2SURPO15042 1029 aaKnown RBP20.6■□□□□ 0.89
HDHD3-203ENST00000485934 BAG6P46379 1132 aa20.6■□□□□ 0.89
HDHD3-203ENST00000485934 TRIM37O94972 964 aa20.59■□□□□ 0.89
HDHD3-203ENST00000485934 PRKRIP1Q9H875 184 aaPredicted RBP20.59■□□□□ 0.89
HDHD3-203ENST00000485934 BCL11BQ9C0K0 894 aaPredicted RBP20.58■□□□□ 0.89
HDHD3-203ENST00000485934 KDRP35968 1356 aa20.58■□□□□ 0.88
HDHD3-203ENST00000485934 MEGF6O75095 1541 aa20.58■□□□□ 0.88
HDHD3-203ENST00000485934 HSP90AB1P08238 724 aaKnown RBP20.57■□□□□ 0.88
HDHD3-203ENST00000485934 IFNL2Q8IZJ0 200 aa20.57■□□□□ 0.88
HDHD3-203ENST00000485934 BRWD3Q6RI45 1802 aa20.57■□□□□ 0.88
HDHD3-203ENST00000485934 LRRC37A3O60309 1634 aa20.56■□□□□ 0.88
HDHD3-203ENST00000485934 ANP32CO43423 234 aa20.56■□□□□ 0.88
HDHD3-203ENST00000485934 PNNQ9H307 717 aaKnown RBP20.56■□□□□ 0.88
HDHD3-203ENST00000485934 APBA3O96018 575 aa20.55■□□□□ 0.88
HDHD3-203ENST00000485934 U2AF1L5P0DN76 240 aaPredicted RBP20.55■□□□□ 0.88
HDHD3-203ENST00000485934 U2AF1Q01081 240 aaKnown RBP eCLIP20.55■□□□□ 0.88
HDHD3-203ENST00000485934 FCHSD2O94868 740 aa20.54■□□□□ 0.88
HDHD3-203ENST00000485934 NEFMP07197 916 aa20.54■□□□□ 0.88
HDHD3-203ENST00000485934 HMOX1P09601 288 aa20.54■□□□□ 0.88
HDHD3-203ENST00000485934 C1orf141Q5JVX7 400 aa20.54■□□□□ 0.88
HDHD3-203ENST00000485934 AEBP1Q8IUX7 1158 aa20.53■□□□□ 0.88
HDHD3-203ENST00000485934 CYP27B1O15528 508 aa20.52■□□□□ 0.88
HDHD3-203ENST00000485934 NKX1-1Q15270 411 aaPredicted RBP20.52■□□□□ 0.88
HDHD3-203ENST00000485934 WNK3Q9BYP7 1800 aa20.51■□□□□ 0.87
HDHD3-203ENST00000485934 HMGB2P26583 209 aaKnown RBP20.51■□□□□ 0.87
HDHD3-203ENST00000485934 COL3A1P02461 1466 aaPredicted RBP20.5■□□□□ 0.87
HDHD3-203ENST00000485934 PLSCR1O15162 318 aa20.5■□□□□ 0.87
HDHD3-203ENST00000485934 PHKG2P15735 406 aa20.5■□□□□ 0.87
HDHD3-203ENST00000485934 ZNF530Q6P9A1 599 aaPredicted RBP20.5■□□□□ 0.87
HDHD3-203ENST00000485934 SYTL4Q96C24 671 aaPredicted RBP20.49■□□□□ 0.87
HDHD3-203ENST00000485934 ACSBG1Q96GR2 724 aa20.49■□□□□ 0.87
HDHD3-203ENST00000485934 DCAF5Q96JK2 942 aa20.49■□□□□ 0.87
HDHD3-203ENST00000485934 RGPD2P0DJD1 1756 aa20.49■□□□□ 0.87
HDHD3-203ENST00000485934 PRIM1P49642 420 aaKnown RBP20.48■□□□□ 0.87
HDHD3-203ENST00000485934 GAS2L2Q8NHY3 880 aa20.48■□□□□ 0.87
HDHD3-203ENST00000485934 AKAP4Q5JQC9 854 aa20.47■□□□□ 0.87
HDHD3-203ENST00000485934 KCNQ2O43526 872 aa20.46■□□□□ 0.87
HDHD3-203ENST00000485934 PRKAR2BP31323 418 aa20.46■□□□□ 0.87
HDHD3-203ENST00000485934 EN1Q05925 392 aaPredicted RBP20.46■□□□□ 0.87
HDHD3-203ENST00000485934 WDR43Q15061 677 aaKnown RBP eCLIP20.46■□□□□ 0.87
HDHD3-203ENST00000485934 DEFB132Q7Z7B7 95 aa20.46■□□□□ 0.87
HDHD3-203ENST00000485934 ERVV-2B6SEH9 535 aa20.45■□□□□ 0.86
HDHD3-203ENST00000485934 RSPH6AQ9H0K4 717 aa20.45■□□□□ 0.86
HDHD3-203ENST00000485934 CAMKK2Q96RR4 588 aa20.44■□□□□ 0.86
HDHD3-203ENST00000485934 RGPD1P0DJD0 1748 aa20.44■□□□□ 0.86
HDHD3-203ENST00000485934 MTHFSDQ2M296 383 aaKnown RBP20.43■□□□□ 0.86
HDHD3-203ENST00000485934 TMOD3Q9NYL9 352 aa20.43■□□□□ 0.86
HDHD3-203ENST00000485934 EP400Q96L91 3159 aa20.42■□□□□ 0.86
HDHD3-203ENST00000485934 MPRIPQ6WCQ1 1025 aa20.42■□□□□ 0.86
HDHD3-203ENST00000485934 SMARCC1Q92922 1105 aaPredicted RBP20.42■□□□□ 0.86
HDHD3-203ENST00000485934 CABP4P57796 275 aa20.41■□□□□ 0.86
HDHD3-203ENST00000485934 GNAT3A8MTJ3 354 aa20.4■□□□□ 0.86
HDHD3-203ENST00000485934 EZH2Q15910 746 aaKnown RBP20.4■□□□□ 0.86
HDHD3-203ENST00000485934 NBPF14Q5TI25 921 aa20.4■□□□□ 0.86
HDHD3-203ENST00000485934 PKD1L3Q7Z443 1732 aa20.4■□□□□ 0.86
HDHD3-203ENST00000485934 MAPK8IP3Q9UPT6 1336 aa20.4■□□□□ 0.86
HDHD3-203ENST00000485934 SLC27A3Q5K4L6 730 aa20.39■□□□□ 0.85
HDHD3-203ENST00000485934 RTF1Q92541 710 aaKnown RBP20.39■□□□□ 0.85
HDHD3-203ENST00000485934 HTATSF1O43719 755 aaKnown RBP20.38■□□□□ 0.85
HDHD3-203ENST00000485934 PTF1AQ7RTS3 328 aa20.38■□□□□ 0.85
HDHD3-203ENST00000485934 TXNRD1Q16881 649 aa20.37■□□□□ 0.85
HDHD3-203ENST00000485934 PIGBQ92521 554 aa20.37■□□□□ 0.85
HDHD3-203ENST00000485934 PHACTR3Q96KR7 559 aa20.37■□□□□ 0.85
HDHD3-203ENST00000485934 MAP3K5Q99683 1374 aa20.34■□□□□ 0.85
HDHD3-203ENST00000485934 RNMTO43148 476 aaKnown RBP20.34■□□□□ 0.85
HDHD3-203ENST00000485934 PLEKHF1Q96S99 279 aa20.34■□□□□ 0.85
HDHD3-203ENST00000485934 MRS2Q9HD23 443 aa20.34■□□□□ 0.85
HDHD3-203ENST00000485934 NHSQ6T4R5 1651 aa20.34■□□□□ 0.85
HDHD3-203ENST00000485934 TEFQ10587 303 aa20.33■□□□□ 0.85
HDHD3-203ENST00000485934 NFATC2IPQ8NCF5 419 aa20.33■□□□□ 0.85
HDHD3-203ENST00000485934 SLC52A2Q9HAB3 445 aa20.33■□□□□ 0.85
HDHD3-203ENST00000485934 ADAMTS8Q9UP79 889 aa20.33■□□□□ 0.85
HDHD3-203ENST00000485934 RUNDC1Q96C34 613 aa20.32■□□□□ 0.84
HDHD3-203ENST00000485934 SHANK3Q9BYB0 1731 aa20.32■□□□□ 0.84
HDHD3-203ENST00000485934 TNS1Q9HBL0 1735 aaKnown RBP20.31■□□□□ 0.84
HDHD3-203ENST00000485934 LMOD3Q0VAK6 560 aa20.31■□□□□ 0.84
HDHD3-203ENST00000485934 NFE2L2Q16236 605 aa20.31■□□□□ 0.84
HDHD3-203ENST00000485934 PROM2Q8N271 834 aa20.31■□□□□ 0.84
HDHD3-203ENST00000485934 LGR6Q9HBX8 967 aa20.31■□□□□ 0.84
HDHD3-203ENST00000485934 CCNL1Q9UK58 526 aaPredicted RBP20.31■□□□□ 0.84
HDHD3-203ENST00000485934 SBF2Q86WG5 1849 aa20.31■□□□□ 0.84
HDHD3-203ENST00000485934 PALLDQ8WX93 1383 aa20.3■□□□□ 0.84
HDHD3-203ENST00000485934 KDM6AO15550 1401 aaPredicted RBP20.29■□□□□ 0.84
HDHD3-203ENST00000485934 IL17REQ8NFR9 667 aa20.28■□□□□ 0.84
HDHD3-203ENST00000485934 ATG3Q9NT62 314 aa20.28■□□□□ 0.84
HDHD3-203ENST00000485934 STK32BQ9NY57 414 aa20.28■□□□□ 0.84
HDHD3-203ENST00000485934 ASAP1Q9ULH1 1129 aa20.28■□□□□ 0.84
HDHD3-203ENST00000485934 KAT6BQ8WYB5 2073 aa20.27■□□□□ 0.84
HDHD3-203ENST00000485934 DOT1LQ8TEK3 1739 aa20.27■□□□□ 0.83
HDHD3-203ENST00000485934 LOC102724428A0A0B4J2F2 783 aa20.26■□□□□ 0.83
HDHD3-203ENST00000485934 SIK1P57059 783 aa20.26■□□□□ 0.83
HDHD3-203ENST00000485934 RIPK4P57078 832 aa20.26■□□□□ 0.83
HDHD3-203ENST00000485934 DIEXFQ68CQ4 756 aaKnown RBP20.26■□□□□ 0.83
HDHD3-203ENST00000485934 TTC5Q8N0Z6 440 aa20.26■□□□□ 0.83
HDHD3-203ENST00000485934 PNISRQ8TF01 805 aaKnown RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms