RNA–Protein interactions for RNA: ENST00000485277.1

USP21-206, Transcript of ubiquitin specific peptidase 21, humanhuman

TSL 5

Gene USP21, Length 863 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP21-206ENST00000485277 SPG7Q9UQ90 795 aa12.9□□□□□ -0.34
USP21-206ENST00000485277 PLEKHO1Q53GL0 409 aaPredicted RBP12.89□□□□□ -0.35
USP21-206ENST00000485277 KRT27Q7Z3Y8 459 aa12.89□□□□□ -0.35
USP21-206ENST00000485277 AEBP1Q8IUX7 1158 aa12.89□□□□□ -0.35
USP21-206ENST00000485277 RGPD1P0DJD0 1748 aa12.88□□□□□ -0.35
USP21-206ENST00000485277 HMOX1P09601 288 aa12.88□□□□□ -0.35
USP21-206ENST00000485277 WDR43Q15061 677 aaKnown RBP eCLIP12.88□□□□□ -0.35
USP21-206ENST00000485277 MRS2Q9HD23 443 aa12.88□□□□□ -0.35
USP21-206ENST00000485277 THSD7AQ9UPZ6 1657 aa12.88□□□□□ -0.35
USP21-206ENST00000485277 OVOS2A0A0G2JMS6 1433 aa12.88□□□□□ -0.35
USP21-206ENST00000485277 RGS12O14924 1447 aa12.88□□□□□ -0.35
USP21-206ENST00000485277 RGPD2P0DJD1 1756 aa12.87□□□□□ -0.35
USP21-206ENST00000485277 NEFMP07197 916 aa12.87□□□□□ -0.35
USP21-206ENST00000485277 PNISRQ8TF01 805 aaKnown RBP12.87□□□□□ -0.35
USP21-206ENST00000485277 RSPH6AQ9H0K4 717 aa12.87□□□□□ -0.35
USP21-206ENST00000485277 PARP4Q9UKK3 1724 aaKnown RBP12.86□□□□□ -0.35
USP21-206ENST00000485277 MEGF6O75095 1541 aa12.86□□□□□ -0.35
USP21-206ENST00000485277 PCDH11XQ9BZA7 1347 aa12.86□□□□□ -0.35
USP21-206ENST00000485277 PCDH11YQ9BZA8 1340 aa12.86□□□□□ -0.35
USP21-206ENST00000485277 CCDC184Q52MB2 194 aa12.85□□□□□ -0.35
USP21-206ENST00000485277 FAM196AQ6ZSG2 479 aa12.85□□□□□ -0.35
USP21-206ENST00000485277 IFNL2Q8IZJ0 200 aa12.85□□□□□ -0.35
USP21-206ENST00000485277 TNS2Q63HR2 1409 aa12.85□□□□□ -0.35
USP21-206ENST00000485277 HSP90AB1P08238 724 aaKnown RBP12.84□□□□□ -0.35
USP21-206ENST00000485277 PRKAR2BP31323 418 aa12.84□□□□□ -0.35
USP21-206ENST00000485277 NKX1-1Q15270 411 aaPredicted RBP12.84□□□□□ -0.35
USP21-206ENST00000485277 MARCH10Q8NA82 808 aaPredicted RBP12.84□□□□□ -0.35
USP21-206ENST00000485277 GAS2L2Q8NHY3 880 aa12.84□□□□□ -0.35
USP21-206ENST00000485277 DDX54Q8TDD1 881 aaKnown RBP12.84□□□□□ -0.35
USP21-206ENST00000485277 ADAMTS8Q9UP79 889 aa12.84□□□□□ -0.35
USP21-206ENST00000485277 BCL9O00512 1426 aa12.84□□□□□ -0.35
USP21-206ENST00000485277 PELP1Q8IZL8 1130 aaKnown RBP12.83□□□□□ -0.36
USP21-206ENST00000485277 MIER1Q8N108 512 aa12.83□□□□□ -0.36
USP21-206ENST00000485277 PLEKHF1Q96S99 279 aa12.83□□□□□ -0.36
USP21-206ENST00000485277 WNK3Q9BYP7 1800 aa12.83□□□□□ -0.36
USP21-206ENST00000485277 CYP27B1O15528 508 aa12.82□□□□□ -0.36
USP21-206ENST00000485277 PHKG2P15735 406 aa12.82□□□□□ -0.36
USP21-206ENST00000485277 MTHFSDQ2M296 383 aaKnown RBP12.82□□□□□ -0.36
USP21-206ENST00000485277 AKAP4Q5JQC9 854 aa12.82□□□□□ -0.36
USP21-206ENST00000485277 C1orf141Q5JVX7 400 aa12.82□□□□□ -0.36
USP21-206ENST00000485277 RUNDC1Q96C34 613 aa12.82□□□□□ -0.36
USP21-206ENST00000485277 MAPK8IP3Q9UPT6 1336 aa12.82□□□□□ -0.36
USP21-206ENST00000485277 LRRC37A3O60309 1634 aa12.81□□□□□ -0.36
USP21-206ENST00000485277 ZNF530Q6P9A1 599 aaPredicted RBP12.81□□□□□ -0.36
USP21-206ENST00000485277 ILDR2Q71H61 639 aa12.81□□□□□ -0.36
USP21-206ENST00000485277 PHACTR3Q96KR7 559 aa12.81□□□□□ -0.36
USP21-206ENST00000485277 HTATSF1O43719 755 aaKnown RBP12.8□□□□□ -0.36
USP21-206ENST00000485277 CCDC125Q86Z20 511 aa12.8□□□□□ -0.36
USP21-206ENST00000485277 DCAF5Q96JK2 942 aa12.8□□□□□ -0.36
USP21-206ENST00000485277 GNAT3A8MTJ3 354 aa12.79□□□□□ -0.36
USP21-206ENST00000485277 PKD1L3Q7Z443 1732 aa12.79□□□□□ -0.36
USP21-206ENST00000485277 BRWD3Q6RI45 1802 aa12.78□□□□□ -0.36
USP21-206ENST00000485277 ERVV-2B6SEH9 535 aa12.78□□□□□ -0.36
USP21-206ENST00000485277 NCBP3Q53F19 620 aaKnown RBP12.78□□□□□ -0.36
USP21-206ENST00000485277 NFE2L2Q16236 605 aa12.77□□□□□ -0.37
USP21-206ENST00000485277 FAM182BQ5T319 152 aa12.77□□□□□ -0.37
USP21-206ENST00000485277 FAM9BQ8IZU0 186 aa12.77□□□□□ -0.37
USP21-206ENST00000485277 BCL11BQ9C0K0 894 aaPredicted RBP12.77□□□□□ -0.37
USP21-206ENST00000485277 CCDC146Q8IYE0 955 aa12.76□□□□□ -0.37
USP21-206ENST00000485277 RTF1Q92541 710 aaKnown RBP12.76□□□□□ -0.37
USP21-206ENST00000485277 TMPOP42166 694 aaKnown RBP12.75□□□□□ -0.37
USP21-206ENST00000485277 RIPK4P57078 832 aa12.75□□□□□ -0.37
USP21-206ENST00000485277 LMOD3Q0VAK6 560 aa12.75□□□□□ -0.37
USP21-206ENST00000485277 MPRIPQ6WCQ1 1025 aa12.75□□□□□ -0.37
USP21-206ENST00000485277 NGEFQ8N5V2 710 aa12.75□□□□□ -0.37
USP21-206ENST00000485277 MAP3K5Q99683 1374 aa12.75□□□□□ -0.37
USP21-206ENST00000485277 SHANK3Q9BYB0 1731 aa12.74□□□□□ -0.37
USP21-206ENST00000485277 RNMTO43148 476 aaKnown RBP12.74□□□□□ -0.37
USP21-206ENST00000485277 TRIM37O94972 964 aa12.74□□□□□ -0.37
USP21-206ENST00000485277 PRIM1P49642 420 aaKnown RBP12.74□□□□□ -0.37
USP21-206ENST00000485277 APAF1O14727 1248 aa12.73□□□□□ -0.37
USP21-206ENST00000485277 CABP4P57796 275 aa12.73□□□□□ -0.37
USP21-206ENST00000485277 SF3B2Q13435 895 aaKnown RBP12.73□□□□□ -0.37
USP21-206ENST00000485277 IL17REQ8NFR9 667 aa12.73□□□□□ -0.37
USP21-206ENST00000485277 UPF1Q92900 1129 aaKnown RBP eCLIP12.73□□□□□ -0.37
USP21-206ENST00000485277 LGR6Q9HBX8 967 aa12.73□□□□□ -0.37
USP21-206ENST00000485277 KCNQ2O43526 872 aa12.72□□□□□ -0.37
USP21-206ENST00000485277 CCDC27Q2M243 656 aa12.72□□□□□ -0.37
USP21-206ENST00000485277 SYTL4Q96C24 671 aaPredicted RBP12.72□□□□□ -0.37
USP21-206ENST00000485277 ACSBG1Q96GR2 724 aa12.72□□□□□ -0.37
USP21-206ENST00000485277 TMOD3Q9NYL9 352 aa12.72□□□□□ -0.37
USP21-206ENST00000485277 KDM6AO15550 1401 aaPredicted RBP12.71□□□□□ -0.37
USP21-206ENST00000485277 CEMIPQ8WUJ3 1361 aa12.71□□□□□ -0.37
USP21-206ENST00000485277 PLSCR1O15162 318 aa12.71□□□□□ -0.37
USP21-206ENST00000485277 HMGB2P26583 209 aaKnown RBP12.71□□□□□ -0.37
USP21-206ENST00000485277 TEFQ10587 303 aa12.71□□□□□ -0.37
USP21-206ENST00000485277 NFATC2IPQ8NCF5 419 aa12.71□□□□□ -0.37
USP21-206ENST00000485277 SLC52A2Q9HAB3 445 aa12.71□□□□□ -0.37
USP21-206ENST00000485277 EP400Q96L91 3159 aa12.7□□□□□ -0.38
USP21-206ENST00000485277 NEUROD2Q15784 382 aa12.7□□□□□ -0.38
USP21-206ENST00000485277 PIGBQ92521 554 aa12.7□□□□□ -0.38
USP21-206ENST00000485277 SMARCC1Q92922 1105 aaPredicted RBP12.7□□□□□ -0.38
USP21-206ENST00000485277 APBA3O96018 575 aa12.69□□□□□ -0.38
USP21-206ENST00000485277 BAG6P46379 1132 aa12.69□□□□□ -0.38
USP21-206ENST00000485277 CALD1Q05682 793 aaKnown RBP12.69□□□□□ -0.38
USP21-206ENST00000485277 TAF7Q15545 349 aaPredicted RBP12.69□□□□□ -0.38
USP21-206ENST00000485277 MCM10Q7L590 875 aa12.69□□□□□ -0.38
USP21-206ENST00000485277 BABAM1Q9NWV8 329 aa12.69□□□□□ -0.38
USP21-206ENST00000485277 TRIM35Q9UPQ4 493 aa12.69□□□□□ -0.38
USP21-206ENST00000485277 RRP7AQ9Y3A4 280 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms